RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 MYO5CQ9NQX4 1742 aa18.33■□□□□ 0.52
CEACAM1-212ENST00000488639 TTC37Q6PGP7 1564 aa18.33■□□□□ 0.52
CEACAM1-212ENST00000488639 PPRC1Q5VV67 1664 aaKnown RBP18.31■□□□□ 0.52
CEACAM1-212ENST00000488639 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
CEACAM1-212ENST00000488639 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
CEACAM1-212ENST00000488639 TSPOAP1O95153 1857 aa18.3■□□□□ 0.52
CEACAM1-212ENST00000488639 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
CEACAM1-212ENST00000488639 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
CEACAM1-212ENST00000488639 PREX2Q70Z35 1606 aa18.27■□□□□ 0.52
CEACAM1-212ENST00000488639 PLCH2O75038 1416 aa18.27■□□□□ 0.52
CEACAM1-212ENST00000488639 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
CEACAM1-212ENST00000488639 NEO1Q92859 1461 aa18.26■□□□□ 0.51
CEACAM1-212ENST00000488639 NCOA2Q15596 1464 aa18.25■□□□□ 0.51
CEACAM1-212ENST00000488639 CDC42BPBQ9Y5S2 1711 aa18.24■□□□□ 0.51
CEACAM1-212ENST00000488639 CCNB3Q8WWL7 1395 aa18.23■□□□□ 0.51
CEACAM1-212ENST00000488639 KANK4Q5T7N3 995 aaPredicted RBP18.23■□□□□ 0.51
CEACAM1-212ENST00000488639 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
CEACAM1-212ENST00000488639 GPATCH8Q9UKJ3 1502 aaKnown RBP18.21■□□□□ 0.51
CEACAM1-212ENST00000488639 FANCAO15360 1455 aa18.2■□□□□ 0.5
CEACAM1-212ENST00000488639 ARHGAP5Q13017 1502 aa18.2■□□□□ 0.5
CEACAM1-212ENST00000488639 EFCAB2Q5VUJ9 269 aa18.18■□□□□ 0.5
CEACAM1-212ENST00000488639 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
CEACAM1-212ENST00000488639 AKNAQ7Z591 1439 aa18.15■□□□□ 0.5
CEACAM1-212ENST00000488639 MIA2Q96PC5 1412 aa18.15■□□□□ 0.5
CEACAM1-212ENST00000488639 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
CEACAM1-212ENST00000488639 KDM6BO15054 1643 aa18.14■□□□□ 0.49
CEACAM1-212ENST00000488639 CFDP1Q9UEE9 299 aaPredicted RBP18.14■□□□□ 0.49
CEACAM1-212ENST00000488639 ABCC1P33527 1531 aa18.12■□□□□ 0.49
CEACAM1-212ENST00000488639 KIAA1107Q9UPP5 1409 aa18.11■□□□□ 0.49
CEACAM1-212ENST00000488639 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
CEACAM1-212ENST00000488639 SAMD9LQ8IVG5 1584 aa18.11■□□□□ 0.49
CEACAM1-212ENST00000488639 DENND4BO75064 1496 aaPredicted RBP18.07■□□□□ 0.48
CEACAM1-212ENST00000488639 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
CEACAM1-212ENST00000488639 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
CEACAM1-212ENST00000488639 CAMSAP2Q08AD1 1489 aa18.06■□□□□ 0.48
CEACAM1-212ENST00000488639 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
CEACAM1-212ENST00000488639 POGZQ7Z3K3 1410 aa18.06■□□□□ 0.48
CEACAM1-212ENST00000488639 SCAPERQ9BY12 1400 aa18.06■□□□□ 0.48
CEACAM1-212ENST00000488639 PTPN23Q9H3S7 1636 aa18.05■□□□□ 0.48
CEACAM1-212ENST00000488639 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
CEACAM1-212ENST00000488639 RSPH4AQ5TD94 716 aa18.04■□□□□ 0.48
CEACAM1-212ENST00000488639 ARHGEF5Q12774 1597 aa18.04■□□□□ 0.48
CEACAM1-212ENST00000488639 ZMYM4Q5VZL5 1548 aa18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 SYCP2Q9BX26 1530 aa18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 RNF216Q9NWF9 866 aaPredicted RBP18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 KDM5CP41229 1560 aa18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
CEACAM1-212ENST00000488639 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
CEACAM1-212ENST00000488639 MAGI2Q86UL8 1455 aa18.01■□□□□ 0.47
CEACAM1-212ENST00000488639 HOXD11P31277 338 aaPredicted RBP18.01■□□□□ 0.47
CEACAM1-212ENST00000488639 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.01■□□□□ 0.47
CEACAM1-212ENST00000488639 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
CEACAM1-212ENST00000488639 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
CEACAM1-212ENST00000488639 CCDC141Q6ZP82 1450 aa17.98■□□□□ 0.47
CEACAM1-212ENST00000488639 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
CEACAM1-212ENST00000488639 HECW2Q9P2P5 1572 aa17.97■□□□□ 0.47
CEACAM1-212ENST00000488639 PPARGC1BQ86YN6 1023 aaKnown RBP17.97■□□□□ 0.47
CEACAM1-212ENST00000488639 ZNF644Q9H582 1327 aaPredicted RBP17.97■□□□□ 0.47
CEACAM1-212ENST00000488639 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
CEACAM1-212ENST00000488639 RAPGEF3O95398 923 aa17.96■□□□□ 0.47
CEACAM1-212ENST00000488639 DNMT1P26358 1616 aaKnown RBP17.96■□□□□ 0.47
CEACAM1-212ENST00000488639 TRAPPC8Q9Y2L5 1435 aa17.96■□□□□ 0.47
CEACAM1-212ENST00000488639 CROCC2H7BZ55 1655 aa17.95■□□□□ 0.46
CEACAM1-212ENST00000488639 HNRNPMP52272 730 aaKnown RBP eCLIP17.94■□□□□ 0.46
CEACAM1-212ENST00000488639 MAST1Q9Y2H9 1570 aa17.94■□□□□ 0.46
CEACAM1-212ENST00000488639 SHANK2Q9UPX8 1470 aa17.94■□□□□ 0.46
CEACAM1-212ENST00000488639 ARHGEF40Q8TER5 1519 aa17.93■□□□□ 0.46
CEACAM1-212ENST00000488639 INO80Q9ULG1 1556 aaPredicted RBP17.93■□□□□ 0.46
CEACAM1-212ENST00000488639 RTEL1-TNFRSF6BF6WH68 1400 aa17.93■□□□□ 0.46
CEACAM1-212ENST00000488639 AFAP1Q8N556 730 aa17.92■□□□□ 0.46
CEACAM1-212ENST00000488639 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
CEACAM1-212ENST00000488639 ATP7AQ04656 1500 aa17.91■□□□□ 0.46
CEACAM1-212ENST00000488639 KIDINS220Q9ULH0 1771 aa17.91■□□□□ 0.46
CEACAM1-212ENST00000488639 TSPY4P0CV99 314 aa17.9■□□□□ 0.46
CEACAM1-212ENST00000488639 TSPY10P0CW01 314 aa17.9■□□□□ 0.46
CEACAM1-212ENST00000488639 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
CEACAM1-212ENST00000488639 DAPK1P53355 1430 aa17.89■□□□□ 0.46
CEACAM1-212ENST00000488639 REREQ9P2R6 1566 aa17.88■□□□□ 0.45
CEACAM1-212ENST00000488639 FAM50AQ14320 339 aaKnown RBP17.88■□□□□ 0.45
CEACAM1-212ENST00000488639 ABCC5O15440 1437 aa17.88■□□□□ 0.45
CEACAM1-212ENST00000488639 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
CEACAM1-212ENST00000488639 ADGBQ8N7X0 1667 aa17.87■□□□□ 0.45
CEACAM1-212ENST00000488639 KCNA4P22459 653 aa17.87■□□□□ 0.45
CEACAM1-212ENST00000488639 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
CEACAM1-212ENST00000488639 C9orf84Q5VXU9 1444 aa17.86■□□□□ 0.45
CEACAM1-212ENST00000488639 DIP2CQ9Y2E4 1556 aa17.86■□□□□ 0.45
CEACAM1-212ENST00000488639 ABCA6Q8N139 1617 aa17.86■□□□□ 0.45
CEACAM1-212ENST00000488639 ATP10AO60312 1499 aa17.85■□□□□ 0.45
CEACAM1-212ENST00000488639 NPM3O75607 178 aaKnown RBP17.85■□□□□ 0.45
CEACAM1-212ENST00000488639 ADGRL2O95490 1459 aa17.83■□□□□ 0.45
CEACAM1-212ENST00000488639 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
CEACAM1-212ENST00000488639 MYT1LQ9UL68 1186 aa17.82■□□□□ 0.44
CEACAM1-212ENST00000488639 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
CEACAM1-212ENST00000488639 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
CEACAM1-212ENST00000488639 AGLP35573 1532 aa17.79■□□□□ 0.44
CEACAM1-212ENST00000488639 A2MP01023 1474 aa17.78■□□□□ 0.44
CEACAM1-212ENST00000488639 BCORL1Q5H9F3 1711 aa17.78■□□□□ 0.44
CEACAM1-212ENST00000488639 DUOX2Q9NRD8 1548 aa17.77■□□□□ 0.44
CEACAM1-212ENST00000488639 NCOA1Q15788 1441 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms