RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 CFDP1Q9UEE9 299 aaPredicted RBP23.04■■□□□ 1.28
CTNS-206ENST00000488623 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
CTNS-206ENST00000488623 ITSN2Q9NZM3 1697 aa23.02■■□□□ 1.28
CTNS-206ENST00000488623 PTPN23Q9H3S7 1636 aa23.01■■□□□ 1.27
CTNS-206ENST00000488623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.01■■□□□ 1.27
CTNS-206ENST00000488623 ABCA9Q8IUA7 1624 aa23■■□□□ 1.27
CTNS-206ENST00000488623 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
CTNS-206ENST00000488623 ZNF644Q9H582 1327 aaPredicted RBP23■■□□□ 1.27
CTNS-206ENST00000488623 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
CTNS-206ENST00000488623 PLCH2O75038 1416 aa22.99■■□□□ 1.27
CTNS-206ENST00000488623 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
CTNS-206ENST00000488623 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
CTNS-206ENST00000488623 ZNF777Q9ULD5 760 aaPredicted RBP22.97■■□□□ 1.27
CTNS-206ENST00000488623 TEX14Q8IWB6 1497 aa22.93■■□□□ 1.26
CTNS-206ENST00000488623 ITGAEP38570 1179 aa22.93■■□□□ 1.26
CTNS-206ENST00000488623 ARHGAP5Q13017 1502 aa22.92■■□□□ 1.26
CTNS-206ENST00000488623 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
CTNS-206ENST00000488623 CD109Q6YHK3 1445 aa22.91■■□□□ 1.26
CTNS-206ENST00000488623 EFCAB2Q5VUJ9 269 aa22.91■■□□□ 1.26
CTNS-206ENST00000488623 ARAP3Q8WWN8 1544 aa22.9■■□□□ 1.26
CTNS-206ENST00000488623 SAMD9LQ8IVG5 1584 aa22.88■■□□□ 1.25
CTNS-206ENST00000488623 PTPRKQ15262 1439 aa22.85■■□□□ 1.25
CTNS-206ENST00000488623 HNRNPMP52272 730 aaKnown RBP eCLIP22.85■■□□□ 1.25
CTNS-206ENST00000488623 COL17A1Q9UMD9 1497 aaPredicted RBP22.84■■□□□ 1.25
CTNS-206ENST00000488623 ABCC5O15440 1437 aa22.82■■□□□ 1.24
CTNS-206ENST00000488623 FANCAO15360 1455 aa22.82■■□□□ 1.24
CTNS-206ENST00000488623 MBD5Q9P267 1494 aa22.81■■□□□ 1.24
CTNS-206ENST00000488623 DNMT1P26358 1616 aaKnown RBP22.81■■□□□ 1.24
CTNS-206ENST00000488623 DAPK1P53355 1430 aa22.81■■□□□ 1.24
CTNS-206ENST00000488623 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
CTNS-206ENST00000488623 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
CTNS-206ENST00000488623 ARHGEF12Q9NZN5 1544 aa22.79■■□□□ 1.24
CTNS-206ENST00000488623 AKNAQ7Z591 1439 aa22.78■■□□□ 1.24
CTNS-206ENST00000488623 CHIC2Q9UKJ5 165 aa22.78■■□□□ 1.24
CTNS-206ENST00000488623 RSPH4AQ5TD94 716 aa22.77■■□□□ 1.24
CTNS-206ENST00000488623 SYCP2Q9BX26 1530 aa22.77■■□□□ 1.24
CTNS-206ENST00000488623 ARHGEF5Q12774 1597 aa22.76■■□□□ 1.23
CTNS-206ENST00000488623 ABCC1P33527 1531 aa22.76■■□□□ 1.23
CTNS-206ENST00000488623 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
CTNS-206ENST00000488623 NEO1Q92859 1461 aa22.73■■□□□ 1.23
CTNS-206ENST00000488623 CFAP74Q9C0B2 1584 aa22.72■■□□□ 1.23
CTNS-206ENST00000488623 TRAPPC8Q9Y2L5 1435 aa22.72■■□□□ 1.23
CTNS-206ENST00000488623 ADGRL1O94910 1474 aa22.72■■□□□ 1.23
CTNS-206ENST00000488623 KDM4FA0A1W2PPD8 638 aa22.71■■□□□ 1.23
CTNS-206ENST00000488623 TSPY4P0CV99 314 aa22.71■■□□□ 1.23
CTNS-206ENST00000488623 TSPY10P0CW01 314 aa22.71■■□□□ 1.23
CTNS-206ENST00000488623 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
CTNS-206ENST00000488623 CROCC2H7BZ55 1655 aa22.71■■□□□ 1.23
CTNS-206ENST00000488623 AFAP1Q8N556 730 aa22.69■■□□□ 1.22
CTNS-206ENST00000488623 RRP7BPQ9NSQ0 103 aa22.69■■□□□ 1.22
CTNS-206ENST00000488623 ROCK1Q13464 1354 aa22.67■■□□□ 1.22
CTNS-206ENST00000488623 SHANK2Q9UPX8 1470 aa22.66■■□□□ 1.22
CTNS-206ENST00000488623 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
CTNS-206ENST00000488623 SETD5Q9C0A6 1442 aa22.65■■□□□ 1.22
CTNS-206ENST00000488623 ADGRL2O95490 1459 aa22.64■■□□□ 1.21
CTNS-206ENST00000488623 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
CTNS-206ENST00000488623 NAIPQ13075 1403 aa22.64■■□□□ 1.21
CTNS-206ENST00000488623 NCOA1Q15788 1441 aa22.64■■□□□ 1.21
CTNS-206ENST00000488623 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
CTNS-206ENST00000488623 ADGBQ8N7X0 1667 aa22.62■■□□□ 1.21
CTNS-206ENST00000488623 ANKRD30AQ9BXX3 1397 aa22.62■■□□□ 1.21
CTNS-206ENST00000488623 DENND4BO75064 1496 aaPredicted RBP22.6■■□□□ 1.21
CTNS-206ENST00000488623 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
CTNS-206ENST00000488623 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
CTNS-206ENST00000488623 POGZQ7Z3K3 1410 aa22.59■■□□□ 1.21
CTNS-206ENST00000488623 RAPGEF3O95398 923 aa22.59■■□□□ 1.21
CTNS-206ENST00000488623 RTEL1-TNFRSF6BF6WH68 1400 aa22.57■■□□□ 1.2
CTNS-206ENST00000488623 HRCP23327 699 aa22.57■■□□□ 1.2
CTNS-206ENST00000488623 ZNF518AQ6AHZ1 1483 aa22.57■■□□□ 1.2
CTNS-206ENST00000488623 GCC2Q8IWJ2 1684 aa22.56■■□□□ 1.2
CTNS-206ENST00000488623 KDM5CP41229 1560 aa22.54■■□□□ 1.2
CTNS-206ENST00000488623 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
CTNS-206ENST00000488623 KIF15Q9NS87 1388 aa22.53■■□□□ 1.2
CTNS-206ENST00000488623 FRMPD1Q5SYB0 1578 aa22.52■■□□□ 1.2
CTNS-206ENST00000488623 ZFYVE16Q7Z3T8 1539 aa22.52■■□□□ 1.19
CTNS-206ENST00000488623 PLXNC1O60486 1568 aa22.51■■□□□ 1.19
CTNS-206ENST00000488623 INO80Q9ULG1 1556 aaPredicted RBP22.51■■□□□ 1.19
CTNS-206ENST00000488623 MYT1LQ9UL68 1186 aa22.51■■□□□ 1.19
CTNS-206ENST00000488623 ATP7AQ04656 1500 aa22.51■■□□□ 1.19
CTNS-206ENST00000488623 MLH3Q9UHC1 1453 aa22.5■■□□□ 1.19
CTNS-206ENST00000488623 KIDINS220Q9ULH0 1771 aa22.5■■□□□ 1.19
CTNS-206ENST00000488623 ANKRD50Q9ULJ7 1429 aa22.48■■□□□ 1.19
CTNS-206ENST00000488623 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
CTNS-206ENST00000488623 DUOX2Q9NRD8 1548 aa22.45■■□□□ 1.18
CTNS-206ENST00000488623 ZMYM4Q5VZL5 1548 aa22.42■■□□□ 1.18
CTNS-206ENST00000488623 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
CTNS-206ENST00000488623 DHX29Q7Z478 1369 aaKnown RBP22.4■■□□□ 1.18
CTNS-206ENST00000488623 TRIM52Q96A61 297 aa22.4■■□□□ 1.18
CTNS-206ENST00000488623 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.17
CTNS-206ENST00000488623 YEATS2Q9ULM3 1422 aa22.39■■□□□ 1.17
CTNS-206ENST00000488623 ABCA6Q8N139 1617 aa22.39■■□□□ 1.17
CTNS-206ENST00000488623 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
CTNS-206ENST00000488623 ARHGEF40Q8TER5 1519 aa22.38■■□□□ 1.17
CTNS-206ENST00000488623 MAGI2Q86UL8 1455 aa22.38■■□□□ 1.17
CTNS-206ENST00000488623 ERBINQ96RT1 1412 aa22.38■■□□□ 1.17
CTNS-206ENST00000488623 A2MP01023 1474 aa22.36■■□□□ 1.17
CTNS-206ENST00000488623 DIP2CQ9Y2E4 1556 aa22.36■■□□□ 1.17
CTNS-206ENST00000488623 ADAMTSL3P82987 1691 aa22.35■■□□□ 1.17
CTNS-206ENST00000488623 BCORL1Q5H9F3 1711 aa22.34■■□□□ 1.17
CTNS-206ENST00000488623 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms