RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 KIF14Q15058 1648 aa21.97■■□□□ 1.11
UBAP2-211ENST00000488443 FMN1Q68DA7 1419 aa21.96■■□□□ 1.11
UBAP2-211ENST00000488443 CHIC1Q5VXU3 224 aa21.95■■□□□ 1.1
UBAP2-211ENST00000488443 POGZQ7Z3K3 1410 aa21.95■■□□□ 1.1
UBAP2-211ENST00000488443 LMTK3Q96Q04 1460 aa21.95■■□□□ 1.1
UBAP2-211ENST00000488443 HSPA2P54652 639 aa21.94■■□□□ 1.1
UBAP2-211ENST00000488443 PLCH2O75038 1416 aa21.94■■□□□ 1.1
UBAP2-211ENST00000488443 FER1L4A9Z1Z3 1794 aa21.93■■□□□ 1.1
UBAP2-211ENST00000488443 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
UBAP2-211ENST00000488443 LRRIQ1Q96JM4 1722 aa21.92■■□□□ 1.1
UBAP2-211ENST00000488443 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
UBAP2-211ENST00000488443 EFCAB2Q5VUJ9 269 aa21.89■■□□□ 1.09
UBAP2-211ENST00000488443 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
UBAP2-211ENST00000488443 MAGI2Q86UL8 1455 aa21.88■■□□□ 1.09
UBAP2-211ENST00000488443 FBXO41Q8TF61 875 aa21.86■■□□□ 1.09
UBAP2-211ENST00000488443 CLIP1P30622 1438 aa21.85■■□□□ 1.09
UBAP2-211ENST00000488443 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
UBAP2-211ENST00000488443 C9orf84Q5VXU9 1444 aa21.83■■□□□ 1.09
UBAP2-211ENST00000488443 ATP10AO60312 1499 aa21.83■■□□□ 1.08
UBAP2-211ENST00000488443 AFAP1Q8N556 730 aa21.81■■□□□ 1.08
UBAP2-211ENST00000488443 CEBPAP49715 358 aaPredicted RBP21.8■■□□□ 1.08
UBAP2-211ENST00000488443 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
UBAP2-211ENST00000488443 ZNF518AQ6AHZ1 1483 aa21.78■■□□□ 1.08
UBAP2-211ENST00000488443 ARHGEF12Q9NZN5 1544 aa21.77■■□□□ 1.08
UBAP2-211ENST00000488443 PREX2Q70Z35 1606 aa21.74■■□□□ 1.07
UBAP2-211ENST00000488443 KDM5CP41229 1560 aa21.74■■□□□ 1.07
UBAP2-211ENST00000488443 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
UBAP2-211ENST00000488443 ABCA6Q8N139 1617 aa21.73■■□□□ 1.07
UBAP2-211ENST00000488443 PREX1Q8TCU6 1659 aa21.72■■□□□ 1.07
UBAP2-211ENST00000488443 ITSN2Q9NZM3 1697 aa21.71■■□□□ 1.07
UBAP2-211ENST00000488443 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
UBAP2-211ENST00000488443 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
UBAP2-211ENST00000488443 ZNF777Q9ULD5 760 aaPredicted RBP21.7■■□□□ 1.06
UBAP2-211ENST00000488443 TRAPPC8Q9Y2L5 1435 aa21.7■■□□□ 1.06
UBAP2-211ENST00000488443 ABCC1P33527 1531 aa21.7■■□□□ 1.06
UBAP2-211ENST00000488443 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
UBAP2-211ENST00000488443 ESF1Q9H501 851 aaKnown RBP21.64■■□□□ 1.05
UBAP2-211ENST00000488443 C3P01024 1663 aa21.63■■□□□ 1.05
UBAP2-211ENST00000488443 FYCO1Q9BQS8 1478 aa21.63■■□□□ 1.05
UBAP2-211ENST00000488443 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
UBAP2-211ENST00000488443 KIDINS220Q9ULH0 1771 aa21.62■■□□□ 1.05
UBAP2-211ENST00000488443 CERKQ8TCT0 537 aa21.62■■□□□ 1.05
UBAP2-211ENST00000488443 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
UBAP2-211ENST00000488443 SAMD9LQ8IVG5 1584 aa21.6■■□□□ 1.05
UBAP2-211ENST00000488443 REREQ9P2R6 1566 aa21.6■■□□□ 1.05
UBAP2-211ENST00000488443 SYCP2Q9BX26 1530 aa21.6■■□□□ 1.05
UBAP2-211ENST00000488443 STRCQ7RTU9 1775 aa21.59■■□□□ 1.05
UBAP2-211ENST00000488443 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
UBAP2-211ENST00000488443 HNRNPMP52272 730 aaKnown RBP eCLIP21.56■■□□□ 1.044e-7■■■■□ 26.4
UBAP2-211ENST00000488443 AGLP35573 1532 aa21.55■■□□□ 1.04
UBAP2-211ENST00000488443 SETD1BQ9UPS6 1966 aaKnown RBP21.54■■□□□ 1.04
UBAP2-211ENST00000488443 GPATCH8Q9UKJ3 1502 aaKnown RBP21.53■■□□□ 1.04
UBAP2-211ENST00000488443 SPAG9O60271 1321 aaKnown RBP21.53■■□□□ 1.04
UBAP2-211ENST00000488443 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
UBAP2-211ENST00000488443 CCNB3Q8WWL7 1395 aa21.5■■□□□ 1.03
UBAP2-211ENST00000488443 CFDP1Q9UEE9 299 aaPredicted RBP21.5■■□□□ 1.03
UBAP2-211ENST00000488443 ATP7AQ04656 1500 aa21.49■■□□□ 1.03
UBAP2-211ENST00000488443 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
UBAP2-211ENST00000488443 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
UBAP2-211ENST00000488443 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
UBAP2-211ENST00000488443 INO80Q9ULG1 1556 aaPredicted RBP21.44■■□□□ 1.02
UBAP2-211ENST00000488443 GGT6Q6P531 493 aa21.43■■□□□ 1.02
UBAP2-211ENST00000488443 MROH2AA6NES4 1674 aa21.43■■□□□ 1.02
UBAP2-211ENST00000488443 ZNF644Q9H582 1327 aaPredicted RBP21.42■■□□□ 1.02
UBAP2-211ENST00000488443 TIAM1Q13009 1591 aa21.41■■□□□ 1.02
UBAP2-211ENST00000488443 A2MP01023 1474 aa21.41■■□□□ 1.02
UBAP2-211ENST00000488443 PLEKHH2Q8IVE3 1493 aa21.41■■□□□ 1.02
UBAP2-211ENST00000488443 CAMSAP1Q5T5Y3 1602 aa21.4■■□□□ 1.02
UBAP2-211ENST00000488443 ZMYM3Q14202 1370 aa21.4■■□□□ 1.02
UBAP2-211ENST00000488443 PTPRTO14522 1441 aa21.38■■□□□ 1.01
UBAP2-211ENST00000488443 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
UBAP2-211ENST00000488443 PLXNC1O60486 1568 aa21.38■■□□□ 1.01
UBAP2-211ENST00000488443 EHBP1L1Q8N3D4 1523 aa21.38■■□□□ 1.01
UBAP2-211ENST00000488443 NCOA1Q15788 1441 aa21.38■■□□□ 1.01
UBAP2-211ENST00000488443 NCKAP5LQ9HCH0 1330 aa21.36■■□□□ 1.01
UBAP2-211ENST00000488443 ADGBQ8N7X0 1667 aa21.36■■□□□ 1.01
UBAP2-211ENST00000488443 MYO3AQ8NEV4 1616 aa21.36■■□□□ 1.01
UBAP2-211ENST00000488443 CEP162Q5TB80 1403 aa21.35■■□□□ 1.01
UBAP2-211ENST00000488443 NPATQ14207 1427 aa21.34■■□□□ 1.01
UBAP2-211ENST00000488443 LTBP4Q8N2S1 1624 aa21.32■■□□□ 1
UBAP2-211ENST00000488443 DISP3Q9P2K9 1392 aa21.32■■□□□ 1
UBAP2-211ENST00000488443 CEP170BQ9Y4F5 1589 aaPredicted RBP21.3■■□□□ 1
UBAP2-211ENST00000488443 ZNF142P52746 1687 aaPredicted RBP21.29■■□□□ 1
UBAP2-211ENST00000488443 PTPRKQ15262 1439 aa21.29■■□□□ 1
UBAP2-211ENST00000488443 MBD5Q9P267 1494 aa21.28■■□□□ 1
UBAP2-211ENST00000488443 ZNF335Q9H4Z2 1342 aaPredicted RBP21.28■■□□□ 1
UBAP2-211ENST00000488443 CAMSAP2Q08AD1 1489 aa21.26■□□□□ 0.99
UBAP2-211ENST00000488443 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
UBAP2-211ENST00000488443 KIF3BO15066 747 aa21.25■□□□□ 0.99
UBAP2-211ENST00000488443 CCDC141Q6ZP82 1450 aa21.23■□□□□ 0.99
UBAP2-211ENST00000488443 DHX29Q7Z478 1369 aaKnown RBP21.22■□□□□ 0.99
UBAP2-211ENST00000488443 RTEL1-TNFRSF6BF6WH68 1400 aa21.21■□□□□ 0.99
UBAP2-211ENST00000488443 FBXO31Q5XUX0 539 aaPredicted RBP21.2■□□□□ 0.98
UBAP2-211ENST00000488443 ILDR2Q71H61 639 aa21.2■□□□□ 0.98
UBAP2-211ENST00000488443 SPATA31D1Q6ZQQ2 1576 aa21.19■□□□□ 0.98
UBAP2-211ENST00000488443 PLA2R1Q13018 1463 aa21.19■□□□□ 0.98
UBAP2-211ENST00000488443 DNMT1P26358 1616 aaKnown RBP21.18■□□□□ 0.98
UBAP2-211ENST00000488443 UBAP1LF5GYI3 381 aa21.18■□□□□ 0.98
UBAP2-211ENST00000488443 PKD2Q13563 968 aa21.18■□□□□ 0.98
UBAP2-211ENST00000488443 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms