RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 CDC42BPBQ9Y5S2 1711 aa25.42■■□□□ 1.66
ERGIC3-216ENST00000488384 ARHGAP5Q13017 1502 aa25.42■■□□□ 1.66
ERGIC3-216ENST00000488384 RICTORQ6R327 1708 aa25.39■■□□□ 1.65
ERGIC3-216ENST00000488384 MAP3K1Q13233 1512 aa25.38■■□□□ 1.65
ERGIC3-216ENST00000488384 DENND4BO75064 1496 aaPredicted RBP25.37■■□□□ 1.65
ERGIC3-216ENST00000488384 GPATCH8Q9UKJ3 1502 aaKnown RBP25.34■■□□□ 1.65
ERGIC3-216ENST00000488384 RAPGEF3O95398 923 aa25.34■■□□□ 1.65
ERGIC3-216ENST00000488384 EFCAB2Q5VUJ9 269 aa25.34■■□□□ 1.65
ERGIC3-216ENST00000488384 LRRC9Q6ZRR7 1453 aa25.34■■□□□ 1.65
ERGIC3-216ENST00000488384 SUPT6HQ7KZ85 1726 aaKnown RBP25.32■■□□□ 1.64
ERGIC3-216ENST00000488384 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
ERGIC3-216ENST00000488384 SCAPERQ9BY12 1400 aa25.31■■□□□ 1.64
ERGIC3-216ENST00000488384 ABCC1P33527 1531 aa25.31■■□□□ 1.64
ERGIC3-216ENST00000488384 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
ERGIC3-216ENST00000488384 CCNB3Q8WWL7 1395 aa25.3■■□□□ 1.64
ERGIC3-216ENST00000488384 NCOA2Q15596 1464 aa25.29■■□□□ 1.64
ERGIC3-216ENST00000488384 ADAMTSL3P82987 1691 aa25.29■■□□□ 1.64
ERGIC3-216ENST00000488384 ARHGEF40Q8TER5 1519 aa25.28■■□□□ 1.64
ERGIC3-216ENST00000488384 ITSN2Q9NZM3 1697 aa25.28■■□□□ 1.64
ERGIC3-216ENST00000488384 SAMD9LQ8IVG5 1584 aa25.27■■□□□ 1.64
ERGIC3-216ENST00000488384 SIGLEC1Q9BZZ2 1709 aa25.26■■□□□ 1.63
ERGIC3-216ENST00000488384 ARHGEF12Q9NZN5 1544 aa25.24■■□□□ 1.63
ERGIC3-216ENST00000488384 KANK4Q5T7N3 995 aaPredicted RBP25.24■■□□□ 1.63
ERGIC3-216ENST00000488384 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
ERGIC3-216ENST00000488384 KDM5CP41229 1560 aa25.22■■□□□ 1.63
ERGIC3-216ENST00000488384 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
ERGIC3-216ENST00000488384 ZNF518AQ6AHZ1 1483 aa25.22■■□□□ 1.63
ERGIC3-216ENST00000488384 ZFYVE16Q7Z3T8 1539 aa25.2■■□□□ 1.62
ERGIC3-216ENST00000488384 SYCP2Q9BX26 1530 aa25.2■■□□□ 1.62
ERGIC3-216ENST00000488384 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
ERGIC3-216ENST00000488384 MAGI2Q86UL8 1455 aa25.18■■□□□ 1.62
ERGIC3-216ENST00000488384 TRAPPC8Q9Y2L5 1435 aa25.18■■□□□ 1.62
ERGIC3-216ENST00000488384 ZNF777Q9ULD5 760 aaPredicted RBP25.17■■□□□ 1.62
ERGIC3-216ENST00000488384 YEATS2Q9ULM3 1422 aa25.17■■□□□ 1.62
ERGIC3-216ENST00000488384 APLP2Q06481 763 aa25.16■■□□□ 1.62
ERGIC3-216ENST00000488384 MADDQ8WXG6 1647 aa25.15■■□□□ 1.62
ERGIC3-216ENST00000488384 PLEKHH2Q8IVE3 1493 aa25.15■■□□□ 1.62
ERGIC3-216ENST00000488384 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.62
ERGIC3-216ENST00000488384 AFAP1Q8N556 730 aa25.13■■□□□ 1.61
ERGIC3-216ENST00000488384 ZNF644Q9H582 1327 aaPredicted RBP25.11■■□□□ 1.61
ERGIC3-216ENST00000488384 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
ERGIC3-216ENST00000488384 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
ERGIC3-216ENST00000488384 MYOM3Q5VTT5 1437 aa25.09■■□□□ 1.61
ERGIC3-216ENST00000488384 PTPRMP28827 1452 aa25.09■■□□□ 1.61
ERGIC3-216ENST00000488384 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
ERGIC3-216ENST00000488384 DIP2CQ9Y2E4 1556 aa25.07■■□□□ 1.6
ERGIC3-216ENST00000488384 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
ERGIC3-216ENST00000488384 HNRNPMP52272 730 aaKnown RBP eCLIP25.06■■□□□ 1.6
ERGIC3-216ENST00000488384 RIMS1Q86UR5 1692 aaKnown RBP25.06■■□□□ 1.6
ERGIC3-216ENST00000488384 KIDINS220Q9ULH0 1771 aa25.05■■□□□ 1.6
ERGIC3-216ENST00000488384 INO80Q9ULG1 1556 aaPredicted RBP25.04■■□□□ 1.6
ERGIC3-216ENST00000488384 ATP10AO60312 1499 aa25.03■■□□□ 1.6
ERGIC3-216ENST00000488384 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
ERGIC3-216ENST00000488384 MIA2Q96PC5 1412 aa25.03■■□□□ 1.6
ERGIC3-216ENST00000488384 ATP7AQ04656 1500 aa25.01■■□□□ 1.59
ERGIC3-216ENST00000488384 REREQ9P2R6 1566 aa25■■□□□ 1.59
ERGIC3-216ENST00000488384 ARHGEF5Q12774 1597 aa24.99■■□□□ 1.59
ERGIC3-216ENST00000488384 CCDC141Q6ZP82 1450 aa24.98■■□□□ 1.59
ERGIC3-216ENST00000488384 SPAG9O60271 1321 aaKnown RBP24.97■■□□□ 1.59
ERGIC3-216ENST00000488384 FER1L4A9Z1Z3 1794 aa24.96■■□□□ 1.59
ERGIC3-216ENST00000488384 MYT1LQ9UL68 1186 aa24.96■■□□□ 1.59
ERGIC3-216ENST00000488384 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
ERGIC3-216ENST00000488384 FGD6Q6ZV73 1430 aa24.95■■□□□ 1.58
ERGIC3-216ENST00000488384 PTPN23Q9H3S7 1636 aa24.94■■□□□ 1.58
ERGIC3-216ENST00000488384 TCOF1Q13428 1488 aaKnown RBP24.9■■□□□ 1.58
ERGIC3-216ENST00000488384 AGLP35573 1532 aa24.9■■□□□ 1.58
ERGIC3-216ENST00000488384 LMTK3Q96Q04 1460 aa24.89■■□□□ 1.58
ERGIC3-216ENST00000488384 PLXNC1O60486 1568 aa24.89■■□□□ 1.58
ERGIC3-216ENST00000488384 RTEL1-TNFRSF6BF6WH68 1400 aa24.89■■□□□ 1.58
ERGIC3-216ENST00000488384 ADGBQ8N7X0 1667 aa24.87■■□□□ 1.57
ERGIC3-216ENST00000488384 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
ERGIC3-216ENST00000488384 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
ERGIC3-216ENST00000488384 CROCC2H7BZ55 1655 aa24.85■■□□□ 1.57
ERGIC3-216ENST00000488384 A2MP01023 1474 aa24.84■■□□□ 1.57
ERGIC3-216ENST00000488384 DNMT1P26358 1616 aaKnown RBP24.83■■□□□ 1.56
ERGIC3-216ENST00000488384 MLECQ14165 292 aa24.81■■□□□ 1.56
ERGIC3-216ENST00000488384 SHANK2Q9UPX8 1470 aa24.8■■□□□ 1.56
ERGIC3-216ENST00000488384 ABCC5O15440 1437 aa24.79■■□□□ 1.56
ERGIC3-216ENST00000488384 PPARGC1BQ86YN6 1023 aaKnown RBP24.79■■□□□ 1.56
ERGIC3-216ENST00000488384 DAPK1P53355 1430 aa24.78■■□□□ 1.56
ERGIC3-216ENST00000488384 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
ERGIC3-216ENST00000488384 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
ERGIC3-216ENST00000488384 DHX29Q7Z478 1369 aaKnown RBP24.73■■□□□ 1.55
ERGIC3-216ENST00000488384 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
ERGIC3-216ENST00000488384 C3P01024 1663 aa24.7■■□□□ 1.54
ERGIC3-216ENST00000488384 FAM50AQ14320 339 aaKnown RBP24.69■■□□□ 1.54
ERGIC3-216ENST00000488384 ILDR1Q86SU0 546 aaPredicted RBP24.68■■□□□ 1.54
ERGIC3-216ENST00000488384 DUOX2Q9NRD8 1548 aa24.65■■□□□ 1.54
ERGIC3-216ENST00000488384 EIF2AK4Q9P2K8 1649 aaKnown RBP24.64■■□□□ 1.54
ERGIC3-216ENST00000488384 KIF15Q9NS87 1388 aa24.64■■□□□ 1.53
ERGIC3-216ENST00000488384 ADGRL2O95490 1459 aa24.64■■□□□ 1.53
ERGIC3-216ENST00000488384 CNTLNQ9NXG0 1405 aa24.62■■□□□ 1.53
ERGIC3-216ENST00000488384 RNF17Q9BXT8 1623 aaKnown RBP24.62■■□□□ 1.53
ERGIC3-216ENST00000488384 PLPPR3Q6T4P5 718 aa24.62■■□□□ 1.53
ERGIC3-216ENST00000488384 MROH2AA6NES4 1674 aa24.62■■□□□ 1.53
ERGIC3-216ENST00000488384 RRBP1Q9P2E9 1410 aaKnown RBP24.61■■□□□ 1.53
ERGIC3-216ENST00000488384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.61■■□□□ 1.53
ERGIC3-216ENST00000488384 CLTCQ00610 1675 aaKnown RBP24.61■■□□□ 1.53
ERGIC3-216ENST00000488384 KIF3BO15066 747 aa24.6■■□□□ 1.53
ERGIC3-216ENST00000488384 HSPA2P54652 639 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms