RNA–Protein interactions for RNA: ENST00000488334.1

GABBR1-215, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-215ENST00000488334 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.2
GABBR1-215ENST00000488334 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
GABBR1-215ENST00000488334 ARHGAP5Q13017 1502 aa22.52■■□□□ 1.19
GABBR1-215ENST00000488334 PREX2Q70Z35 1606 aa22.5■■□□□ 1.19
GABBR1-215ENST00000488334 CFDP1Q9UEE9 299 aaPredicted RBP22.5■■□□□ 1.19
GABBR1-215ENST00000488334 CDC42BPAQ5VT25 1732 aa22.47■■□□□ 1.19
GABBR1-215ENST00000488334 CDC42BPBQ9Y5S2 1711 aa22.46■■□□□ 1.19
GABBR1-215ENST00000488334 ADGRL1O94910 1474 aa22.46■■□□□ 1.19
GABBR1-215ENST00000488334 PLEKHH2Q8IVE3 1493 aa22.46■■□□□ 1.19
GABBR1-215ENST00000488334 ITSN2Q9NZM3 1697 aa22.46■■□□□ 1.19
GABBR1-215ENST00000488334 DENND4BO75064 1496 aaPredicted RBP22.45■■□□□ 1.18
GABBR1-215ENST00000488334 COL17A1Q9UMD9 1497 aaPredicted RBP22.45■■□□□ 1.18
GABBR1-215ENST00000488334 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
GABBR1-215ENST00000488334 KIAA1107Q9UPP5 1409 aa22.42■■□□□ 1.18
GABBR1-215ENST00000488334 MIA2Q96PC5 1412 aa22.41■■□□□ 1.18
GABBR1-215ENST00000488334 MYOM3Q5VTT5 1437 aa22.4■■□□□ 1.18
GABBR1-215ENST00000488334 RSPH4AQ5TD94 716 aa22.39■■□□□ 1.17
GABBR1-215ENST00000488334 ZNF777Q9ULD5 760 aaPredicted RBP22.38■■□□□ 1.17
GABBR1-215ENST00000488334 ZNF518AQ6AHZ1 1483 aa22.37■■□□□ 1.17
GABBR1-215ENST00000488334 RAPGEF3O95398 923 aa22.37■■□□□ 1.17
GABBR1-215ENST00000488334 POGZQ7Z3K3 1410 aa22.37■■□□□ 1.17
GABBR1-215ENST00000488334 ABCC1P33527 1531 aa22.36■■□□□ 1.17
GABBR1-215ENST00000488334 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
GABBR1-215ENST00000488334 SAMD9LQ8IVG5 1584 aa22.33■■□□□ 1.16
GABBR1-215ENST00000488334 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
GABBR1-215ENST00000488334 RICTORQ6R327 1708 aa22.31■■□□□ 1.16
GABBR1-215ENST00000488334 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
GABBR1-215ENST00000488334 ARHGEF12Q9NZN5 1544 aa22.28■■□□□ 1.16
GABBR1-215ENST00000488334 HNRNPMP52272 730 aaKnown RBP eCLIP22.28■■□□□ 1.16
GABBR1-215ENST00000488334 AFAP1Q8N556 730 aa22.28■■□□□ 1.16
GABBR1-215ENST00000488334 KDM5CP41229 1560 aa22.28■■□□□ 1.16
GABBR1-215ENST00000488334 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
GABBR1-215ENST00000488334 FGD6Q6ZV73 1430 aa22.27■■□□□ 1.16
GABBR1-215ENST00000488334 MLH3Q9UHC1 1453 aa22.27■■□□□ 1.16
GABBR1-215ENST00000488334 ZNF644Q9H582 1327 aaPredicted RBP22.27■■□□□ 1.16
GABBR1-215ENST00000488334 SYCP2Q9BX26 1530 aa22.26■■□□□ 1.15
GABBR1-215ENST00000488334 TRAPPC8Q9Y2L5 1435 aa22.26■■□□□ 1.15
GABBR1-215ENST00000488334 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
GABBR1-215ENST00000488334 TCOF1Q13428 1488 aaKnown RBP22.23■■□□□ 1.15
GABBR1-215ENST00000488334 SPAG9O60271 1321 aaKnown RBP22.23■■□□□ 1.15
GABBR1-215ENST00000488334 ARHGEF5Q12774 1597 aa22.22■■□□□ 1.15
GABBR1-215ENST00000488334 TSPY4P0CV99 314 aa22.22■■□□□ 1.15
GABBR1-215ENST00000488334 TSPY10P0CW01 314 aa22.22■■□□□ 1.15
GABBR1-215ENST00000488334 CCDC141Q6ZP82 1450 aa22.22■■□□□ 1.15
GABBR1-215ENST00000488334 RTEL1-TNFRSF6BF6WH68 1400 aa22.21■■□□□ 1.15
GABBR1-215ENST00000488334 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
GABBR1-215ENST00000488334 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.15
GABBR1-215ENST00000488334 MYT1LQ9UL68 1186 aa22.2■■□□□ 1.14
GABBR1-215ENST00000488334 HECW2Q9P2P5 1572 aa22.2■■□□□ 1.14
GABBR1-215ENST00000488334 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.19■■□□□ 1.14
GABBR1-215ENST00000488334 ARHGEF40Q8TER5 1519 aa22.18■■□□□ 1.14
GABBR1-215ENST00000488334 ATP10AO60312 1499 aa22.17■■□□□ 1.14
GABBR1-215ENST00000488334 PPARGC1BQ86YN6 1023 aaKnown RBP22.16■■□□□ 1.14
GABBR1-215ENST00000488334 YEATS2Q9ULM3 1422 aa22.14■■□□□ 1.13
GABBR1-215ENST00000488334 C9orf84Q5VXU9 1444 aa22.13■■□□□ 1.13
GABBR1-215ENST00000488334 ATP7AQ04656 1500 aa22.12■■□□□ 1.13
GABBR1-215ENST00000488334 FAM50AQ14320 339 aaKnown RBP22.12■■□□□ 1.13
GABBR1-215ENST00000488334 SHANK2Q9UPX8 1470 aa22.11■■□□□ 1.13
GABBR1-215ENST00000488334 REREQ9P2R6 1566 aa22.11■■□□□ 1.13
GABBR1-215ENST00000488334 INO80Q9ULG1 1556 aaPredicted RBP22.11■■□□□ 1.13
GABBR1-215ENST00000488334 KIDINS220Q9ULH0 1771 aa22.1■■□□□ 1.13
GABBR1-215ENST00000488334 RRBP1Q9P2E9 1410 aaKnown RBP22.1■■□□□ 1.13
GABBR1-215ENST00000488334 MAST1Q9Y2H9 1570 aa22.09■■□□□ 1.13
GABBR1-215ENST00000488334 ABCC5O15440 1437 aa22.08■■□□□ 1.13
GABBR1-215ENST00000488334 DAPK1P53355 1430 aa22.08■■□□□ 1.13
GABBR1-215ENST00000488334 DNMT1P26358 1616 aaKnown RBP22.08■■□□□ 1.13
GABBR1-215ENST00000488334 DIP2CQ9Y2E4 1556 aa22.08■■□□□ 1.12
GABBR1-215ENST00000488334 ARID4BQ4LE39 1312 aaPredicted RBP22.06■■□□□ 1.12
GABBR1-215ENST00000488334 ABCA6Q8N139 1617 aa22.05■■□□□ 1.12
GABBR1-215ENST00000488334 AGLP35573 1532 aa22.04■■□□□ 1.12
GABBR1-215ENST00000488334 DHX29Q7Z478 1369 aaKnown RBP22.03■■□□□ 1.12
GABBR1-215ENST00000488334 A2MP01023 1474 aa22.03■■□□□ 1.12
GABBR1-215ENST00000488334 ADGBQ8N7X0 1667 aa22.02■■□□□ 1.12
GABBR1-215ENST00000488334 ANKRD30AQ9BXX3 1397 aa22.01■■□□□ 1.11
GABBR1-215ENST00000488334 CROCC2H7BZ55 1655 aa22.01■■□□□ 1.11
GABBR1-215ENST00000488334 PLXNC1O60486 1568 aa22■■□□□ 1.11
GABBR1-215ENST00000488334 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
GABBR1-215ENST00000488334 ADGRL2O95490 1459 aa21.97■■□□□ 1.11
GABBR1-215ENST00000488334 ROCK1Q13464 1354 aa21.97■■□□□ 1.11
GABBR1-215ENST00000488334 NCOA1Q15788 1441 aa21.96■■□□□ 1.11
GABBR1-215ENST00000488334 DUOX2Q9NRD8 1548 aa21.95■■□□□ 1.1
GABBR1-215ENST00000488334 KIF15Q9NS87 1388 aa21.94■■□□□ 1.1
GABBR1-215ENST00000488334 BCORL1Q5H9F3 1711 aa21.93■■□□□ 1.1
GABBR1-215ENST00000488334 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
GABBR1-215ENST00000488334 KDM4FA0A1W2PPD8 638 aa21.92■■□□□ 1.1
GABBR1-215ENST00000488334 RRP7BPQ9NSQ0 103 aa21.92■■□□□ 1.1
GABBR1-215ENST00000488334 ERBINQ96RT1 1412 aa21.91■■□□□ 1.1
GABBR1-215ENST00000488334 PTPRKQ15262 1439 aa21.89■■□□□ 1.09
GABBR1-215ENST00000488334 ADAMTSL3P82987 1691 aa21.88■■□□□ 1.09
GABBR1-215ENST00000488334 KIF3BO15066 747 aa21.88■■□□□ 1.09
GABBR1-215ENST00000488334 ESF1Q9H501 851 aaKnown RBP21.88■■□□□ 1.09
GABBR1-215ENST00000488334 SIGLEC1Q9BZZ2 1709 aa21.88■■□□□ 1.09
GABBR1-215ENST00000488334 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
GABBR1-215ENST00000488334 MLECQ14165 292 aa21.87■■□□□ 1.09
GABBR1-215ENST00000488334 ITGAEP38570 1179 aa21.86■■□□□ 1.09
GABBR1-215ENST00000488334 CNTLNQ9NXG0 1405 aa21.86■■□□□ 1.09
GABBR1-215ENST00000488334 FAM135AQ9P2D6 1515 aa21.85■■□□□ 1.09
GABBR1-215ENST00000488334 GGT6Q6P531 493 aa21.84■■□□□ 1.09
GABBR1-215ENST00000488334 ANKRD50Q9ULJ7 1429 aa21.83■■□□□ 1.09
GABBR1-215ENST00000488334 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms