RNA–Protein interactions for RNA: ENST00000488175.5

GCOM1-210, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,601 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-210ENST00000488175 B4GALNT3Q6L9W6 998 aa22.5■■□□□ 1.19
GCOM1-210ENST00000488175 LAMC3Q9Y6N6 1575 aa22.49■■□□□ 1.19
GCOM1-210ENST00000488175 AKNAQ7Z591 1439 aa22.48■■□□□ 1.19
GCOM1-210ENST00000488175 GCC2Q8IWJ2 1684 aa22.48■■□□□ 1.19
GCOM1-210ENST00000488175 ERICH6BQ5W0A0 696 aa22.47■■□□□ 1.19
GCOM1-210ENST00000488175 ZNF644Q9H582 1327 aaPredicted RBP22.47■■□□□ 1.19
GCOM1-210ENST00000488175 KIF7Q2M1P5 1343 aa22.46■■□□□ 1.19
GCOM1-210ENST00000488175 ANKRD30BQ9BXX2 1392 aa22.46■■□□□ 1.19
GCOM1-210ENST00000488175 MIA2Q96PC5 1412 aa22.46■■□□□ 1.19
GCOM1-210ENST00000488175 SLC4A1APQ9BWU0 796 aaKnown RBP22.45■■□□□ 1.19
GCOM1-210ENST00000488175 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
GCOM1-210ENST00000488175 ERICH6Q7L0X2 663 aa22.44■■□□□ 1.18
GCOM1-210ENST00000488175 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
GCOM1-210ENST00000488175 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
GCOM1-210ENST00000488175 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
GCOM1-210ENST00000488175 DAPK1P53355 1430 aa22.39■■□□□ 1.17
GCOM1-210ENST00000488175 ABCC5O15440 1437 aa22.37■■□□□ 1.17
GCOM1-210ENST00000488175 SPATA31E1Q6ZUB1 1445 aa22.37■■□□□ 1.17
GCOM1-210ENST00000488175 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
GCOM1-210ENST00000488175 TEX14Q8IWB6 1497 aa22.37■■□□□ 1.17
GCOM1-210ENST00000488175 IQGAP2Q13576 1575 aa22.36■■□□□ 1.17
GCOM1-210ENST00000488175 ZNF326Q5BKZ1 582 aaKnown RBP22.35■■□□□ 1.17
GCOM1-210ENST00000488175 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
GCOM1-210ENST00000488175 ROCK1Q13464 1354 aa22.34■■□□□ 1.17
GCOM1-210ENST00000488175 TARBP1Q13395 1621 aaKnown RBP22.33■■□□□ 1.17
GCOM1-210ENST00000488175 WDR62O43379 1518 aa22.33■■□□□ 1.17
GCOM1-210ENST00000488175 ZNF777Q9ULD5 760 aaPredicted RBP22.26■■□□□ 1.15
GCOM1-210ENST00000488175 DHX29Q7Z478 1369 aaKnown RBP22.25■■□□□ 1.15
GCOM1-210ENST00000488175 CFDP1Q9UEE9 299 aaPredicted RBP22.23■■□□□ 1.15
GCOM1-210ENST00000488175 USP47Q96K76 1375 aa22.22■■□□□ 1.15
GCOM1-210ENST00000488175 DNMT1P26358 1616 aaKnown RBP22.22■■□□□ 1.15
GCOM1-210ENST00000488175 ADAMTS12P58397 1594 aa22.22■■□□□ 1.15
GCOM1-210ENST00000488175 PZPP20742 1482 aa22.21■■□□□ 1.15
GCOM1-210ENST00000488175 PKD2Q13563 968 aa22.21■■□□□ 1.15
GCOM1-210ENST00000488175 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
GCOM1-210ENST00000488175 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
GCOM1-210ENST00000488175 PBRM1Q86U86 1689 aa22.21■■□□□ 1.15
GCOM1-210ENST00000488175 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
GCOM1-210ENST00000488175 PRG4Q92954 1404 aaPredicted RBP22.19■■□□□ 1.14
GCOM1-210ENST00000488175 CCDC136Q96JN2 1154 aa22.17■■□□□ 1.14
GCOM1-210ENST00000488175 DISP1Q96F81 1524 aa22.16■■□□□ 1.14
GCOM1-210ENST00000488175 TMC1Q8TDI8 760 aa22.14■■□□□ 1.14
GCOM1-210ENST00000488175 PNISRQ8TF01 805 aaKnown RBP22.14■■□□□ 1.13
GCOM1-210ENST00000488175 KIAA1107Q9UPP5 1409 aa22.14■■□□□ 1.13
GCOM1-210ENST00000488175 ZNF608Q9ULD9 1512 aaPredicted RBP22.14■■□□□ 1.13
GCOM1-210ENST00000488175 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
GCOM1-210ENST00000488175 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
GCOM1-210ENST00000488175 CAMSAP2Q08AD1 1489 aa22.12■■□□□ 1.13
GCOM1-210ENST00000488175 MBD5Q9P267 1494 aa22.12■■□□□ 1.13
GCOM1-210ENST00000488175 NOP58Q9Y2X3 529 aaKnown RBP22.11■■□□□ 1.13
GCOM1-210ENST00000488175 RNF123Q5XPI4 1314 aa22.11■■□□□ 1.13
GCOM1-210ENST00000488175 KIAA0586Q9BVV6 1533 aa22.11■■□□□ 1.13
GCOM1-210ENST00000488175 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
GCOM1-210ENST00000488175 KIAA0556O60303 1618 aa22.1■■□□□ 1.13
GCOM1-210ENST00000488175 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
GCOM1-210ENST00000488175 NBR1Q14596 966 aa22.09■■□□□ 1.13
GCOM1-210ENST00000488175 TROQ12816 1431 aaPredicted RBP22.08■■□□□ 1.13
GCOM1-210ENST00000488175 POLR1AO95602 1720 aaPredicted RBP22.08■■□□□ 1.12
GCOM1-210ENST00000488175 GPATCH8Q9UKJ3 1502 aaKnown RBP22.07■■□□□ 1.12
GCOM1-210ENST00000488175 RAPGEF6Q8TEU7 1601 aa22.07■■□□□ 1.12
GCOM1-210ENST00000488175 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
GCOM1-210ENST00000488175 DEKP35659 375 aaKnown RBP22.05■■□□□ 1.12
GCOM1-210ENST00000488175 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
GCOM1-210ENST00000488175 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
GCOM1-210ENST00000488175 PLB1Q6P1J6 1458 aa22.04■■□□□ 1.12
GCOM1-210ENST00000488175 NUP155O75694 1391 aa22.04■■□□□ 1.12
GCOM1-210ENST00000488175 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
GCOM1-210ENST00000488175 ANKRD50Q9ULJ7 1429 aa22.03■■□□□ 1.12
GCOM1-210ENST00000488175 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
GCOM1-210ENST00000488175 KDM5CP41229 1560 aa22.02■■□□□ 1.11
GCOM1-210ENST00000488175 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
GCOM1-210ENST00000488175 ROCK2O75116 1388 aaKnown RBP21.99■■□□□ 1.11
GCOM1-210ENST00000488175 FBLN2P98095 1184 aa21.99■■□□□ 1.11
GCOM1-210ENST00000488175 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
GCOM1-210ENST00000488175 KIF15Q9NS87 1388 aa21.99■■□□□ 1.11
GCOM1-210ENST00000488175 ADGRL2O95490 1459 aa21.98■■□□□ 1.11
GCOM1-210ENST00000488175 ANP32AP39687 249 aaKnown RBP21.98■■□□□ 1.11
GCOM1-210ENST00000488175 KIF14Q15058 1648 aa21.98■■□□□ 1.11
GCOM1-210ENST00000488175 GRIN2AQ12879 1464 aa21.98■■□□□ 1.11
GCOM1-210ENST00000488175 IPO9Q96P70 1041 aaKnown RBP21.97■■□□□ 1.11
GCOM1-210ENST00000488175 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
GCOM1-210ENST00000488175 UHRF1BP1Q6BDS2 1440 aa21.96■■□□□ 1.11
GCOM1-210ENST00000488175 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.11
GCOM1-210ENST00000488175 RALGAPBQ86X10 1494 aa21.95■■□□□ 1.11
GCOM1-210ENST00000488175 MYBBP1AQ9BQG0 1328 aaKnown RBP21.95■■□□□ 1.1
GCOM1-210ENST00000488175 EXOC6Q8TAG9 804 aa21.94■■□□□ 1.1
GCOM1-210ENST00000488175 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
GCOM1-210ENST00000488175 RRP1P56182 461 aaKnown RBP21.93■■□□□ 1.1
GCOM1-210ENST00000488175 RALBP1Q15311 655 aa21.93■■□□□ 1.1
GCOM1-210ENST00000488175 PLEKHD1A6NEE1 506 aa21.92■■□□□ 1.1
GCOM1-210ENST00000488175 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
GCOM1-210ENST00000488175 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
GCOM1-210ENST00000488175 ZBTB47Q9UFB7 747 aaPredicted RBP21.92■■□□□ 1.1
GCOM1-210ENST00000488175 ADGBQ8N7X0 1667 aa21.92■■□□□ 1.1
GCOM1-210ENST00000488175 BRD4O60885 1362 aaPredicted RBP21.92■■□□□ 1.1
GCOM1-210ENST00000488175 HNRNPMP52272 730 aaKnown RBP eCLIP21.91■■□□□ 1.1
GCOM1-210ENST00000488175 C9orf84Q5VXU9 1444 aa21.9■■□□□ 1.1
GCOM1-210ENST00000488175 ITSN2Q9NZM3 1697 aa21.89■■□□□ 1.09
GCOM1-210ENST00000488175 RCAN3Q9UKA8 241 aa21.89■■□□□ 1.09
GCOM1-210ENST00000488175 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms