RNA–Protein interactions for RNA: ENST00000488064.5

LAMA1-203, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 2,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-203ENST00000488064 CDK13Q14004 1512 aaKnown RBP13.38□□□□□ -0.27
LAMA1-203ENST00000488064 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
LAMA1-203ENST00000488064 ADGRL1O94910 1474 aa13.37□□□□□ -0.27
LAMA1-203ENST00000488064 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
LAMA1-203ENST00000488064 RAPGEF3O95398 923 aa13.35□□□□□ -0.27
LAMA1-203ENST00000488064 ATP1B4Q9UN42 357 aaPredicted RBP13.35□□□□□ -0.27
LAMA1-203ENST00000488064 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
LAMA1-203ENST00000488064 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
LAMA1-203ENST00000488064 ITGAEP38570 1179 aa13.34□□□□□ -0.27
LAMA1-203ENST00000488064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.34□□□□□ -0.27
LAMA1-203ENST00000488064 SETD5Q9C0A6 1442 aa13.33□□□□□ -0.27
LAMA1-203ENST00000488064 NEO1Q92859 1461 aa13.32□□□□□ -0.28
LAMA1-203ENST00000488064 TTC37Q6PGP7 1564 aa13.32□□□□□ -0.28
LAMA1-203ENST00000488064 PHLDB1Q86UU1 1377 aa13.32□□□□□ -0.28
LAMA1-203ENST00000488064 BCL11AQ9H165 835 aa13.31□□□□□ -0.28
LAMA1-203ENST00000488064 HECW1Q76N89 1606 aa13.3□□□□□ -0.28
LAMA1-203ENST00000488064 LRRIQ1Q96JM4 1722 aa13.29□□□□□ -0.28
LAMA1-203ENST00000488064 FRMPD1Q5SYB0 1578 aa13.29□□□□□ -0.28
LAMA1-203ENST00000488064 FANCAO15360 1455 aa13.28□□□□□ -0.28
LAMA1-203ENST00000488064 AKNAQ7Z591 1439 aa13.27□□□□□ -0.28
LAMA1-203ENST00000488064 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.29
LAMA1-203ENST00000488064 SUPT16HQ9Y5B9 1047 aaKnown RBP13.26□□□□□ -0.29
LAMA1-203ENST00000488064 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
LAMA1-203ENST00000488064 KIF14Q15058 1648 aa13.25□□□□□ -0.29
LAMA1-203ENST00000488064 PLCH2O75038 1416 aa13.25□□□□□ -0.29
LAMA1-203ENST00000488064 RICTORQ6R327 1708 aa13.24□□□□□ -0.29
LAMA1-203ENST00000488064 FAM50AQ14320 339 aaKnown RBP13.24□□□□□ -0.29
LAMA1-203ENST00000488064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
LAMA1-203ENST00000488064 DENND4BO75064 1496 aaPredicted RBP13.24□□□□□ -0.29
LAMA1-203ENST00000488064 FYCO1Q9BQS8 1478 aa13.24□□□□□ -0.29
LAMA1-203ENST00000488064 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
LAMA1-203ENST00000488064 TROQ12816 1431 aaPredicted RBP13.23□□□□□ -0.29
LAMA1-203ENST00000488064 CASKIN1Q8WXD9 1431 aa13.23□□□□□ -0.29
LAMA1-203ENST00000488064 CFAP74Q9C0B2 1584 aa13.21□□□□□ -0.29
LAMA1-203ENST00000488064 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
LAMA1-203ENST00000488064 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
LAMA1-203ENST00000488064 YEATS2Q9ULM3 1422 aa13.19□□□□□ -0.3
LAMA1-203ENST00000488064 EFCAB2Q5VUJ9 269 aa13.18□□□□□ -0.3
LAMA1-203ENST00000488064 ARHGEF40Q8TER5 1519 aa13.18□□□□□ -0.3
LAMA1-203ENST00000488064 ZMYM4Q5VZL5 1548 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
LAMA1-203ENST00000488064 ADAMTSL3P82987 1691 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 CCDC18Q5T9S5 1454 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 SIGLEC1Q9BZZ2 1709 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 POGZQ7Z3K3 1410 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
LAMA1-203ENST00000488064 ARHGAP5Q13017 1502 aa13.15□□□□□ -0.3
LAMA1-203ENST00000488064 BCORL1Q5H9F3 1711 aa13.15□□□□□ -0.3
LAMA1-203ENST00000488064 CDC42BPBQ9Y5S2 1711 aa13.15□□□□□ -0.3
LAMA1-203ENST00000488064 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
LAMA1-203ENST00000488064 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
LAMA1-203ENST00000488064 HECW2Q9P2P5 1572 aa13.14□□□□□ -0.31
LAMA1-203ENST00000488064 PTPRMP28827 1452 aa13.14□□□□□ -0.31
LAMA1-203ENST00000488064 ZFYVE16Q7Z3T8 1539 aa13.14□□□□□ -0.31
LAMA1-203ENST00000488064 DDX10Q13206 875 aaKnown RBP13.14□□□□□ -0.31
LAMA1-203ENST00000488064 PPP1R15AO75807 674 aaPredicted RBP13.13□□□□□ -0.31
LAMA1-203ENST00000488064 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
LAMA1-203ENST00000488064 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
LAMA1-203ENST00000488064 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
LAMA1-203ENST00000488064 PREX2Q70Z35 1606 aa13.11□□□□□ -0.31
LAMA1-203ENST00000488064 ARHGEF12Q9NZN5 1544 aa13.11□□□□□ -0.31
LAMA1-203ENST00000488064 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
LAMA1-203ENST00000488064 CCER2I3L3R5 266 aa13.1□□□□□ -0.31
LAMA1-203ENST00000488064 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
LAMA1-203ENST00000488064 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
LAMA1-203ENST00000488064 KDM5CP41229 1560 aa13.09□□□□□ -0.31
LAMA1-203ENST00000488064 MLECQ14165 292 aa13.09□□□□□ -0.31
LAMA1-203ENST00000488064 TRAPPC8Q9Y2L5 1435 aa13.09□□□□□ -0.31
LAMA1-203ENST00000488064 TONSLQ96HA7 1378 aa13.08□□□□□ -0.32
LAMA1-203ENST00000488064 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
LAMA1-203ENST00000488064 ANP32CO43423 234 aa13.08□□□□□ -0.32
LAMA1-203ENST00000488064 ATP10AO60312 1499 aa13.08□□□□□ -0.32
LAMA1-203ENST00000488064 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
LAMA1-203ENST00000488064 ABCC1P33527 1531 aa13.07□□□□□ -0.32
LAMA1-203ENST00000488064 RIMS1Q86UR5 1692 aaKnown RBP13.07□□□□□ -0.32
LAMA1-203ENST00000488064 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
LAMA1-203ENST00000488064 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
LAMA1-203ENST00000488064 PLPPR3Q6T4P5 718 aa13.05□□□□□ -0.32
LAMA1-203ENST00000488064 C9orf84Q5VXU9 1444 aa13.05□□□□□ -0.32
LAMA1-203ENST00000488064 PTPN23Q9H3S7 1636 aa13.05□□□□□ -0.32
LAMA1-203ENST00000488064 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 ITSN2Q9NZM3 1697 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 MYOM3Q5VTT5 1437 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 MLH3Q9UHC1 1453 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 DIP2CQ9Y2E4 1556 aa13.04□□□□□ -0.32
LAMA1-203ENST00000488064 SUPT6HQ7KZ85 1726 aaKnown RBP13.03□□□□□ -0.32
LAMA1-203ENST00000488064 NEFLP07196 543 aa13.03□□□□□ -0.32
LAMA1-203ENST00000488064 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
LAMA1-203ENST00000488064 EHBP1L1Q8N3D4 1523 aa13.03□□□□□ -0.32
LAMA1-203ENST00000488064 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
LAMA1-203ENST00000488064 NCOA2Q15596 1464 aa13.02□□□□□ -0.32
LAMA1-203ENST00000488064 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.33
LAMA1-203ENST00000488064 SYCP2Q9BX26 1530 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 FKBP8Q14318 412 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 FER1L4A9Z1Z3 1794 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 PLEKHG5O94827 1062 aa13.01□□□□□ -0.33
LAMA1-203ENST00000488064 NAIPQ13075 1403 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms