RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 KIAA1211Q6ZU35 1233 aa19.52■□□□□ 0.72
PKD1-220ENST00000487932 ARID3AQ99856 593 aa19.52■□□□□ 0.72
PKD1-220ENST00000487932 L1TD1Q5T7N2 865 aaKnown RBP19.52■□□□□ 0.72
PKD1-220ENST00000487932 CLIP1P30622 1438 aa19.52■□□□□ 0.71
PKD1-220ENST00000487932 VPS53Q5VIR6 699 aa19.52■□□□□ 0.71
PKD1-220ENST00000487932 TAF7LQ5H9L4 462 aa19.51■□□□□ 0.71
PKD1-220ENST00000487932 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
PKD1-220ENST00000487932 MSNP26038 577 aaKnown RBP19.51■□□□□ 0.71
PKD1-220ENST00000487932 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
PKD1-220ENST00000487932 GGT6Q6P531 493 aa19.5■□□□□ 0.71
PKD1-220ENST00000487932 ERCC6Q03468 1493 aa19.49■□□□□ 0.71
PKD1-220ENST00000487932 FBXO3Q9UK99 471 aa19.49■□□□□ 0.71
PKD1-220ENST00000487932 TMF1P82094 1093 aa19.48■□□□□ 0.71
PKD1-220ENST00000487932 WWC1Q8IX03 1113 aa19.48■□□□□ 0.71
PKD1-220ENST00000487932 KRI1Q8N9T8 703 aaKnown RBP19.47■□□□□ 0.71
PKD1-220ENST00000487932 A0A0U1RQG5 324 aaPredicted RBP19.47■□□□□ 0.71
PKD1-220ENST00000487932 SIN3AQ96ST3 1273 aa19.46■□□□□ 0.71
PKD1-220ENST00000487932 RASSF8Q8NHQ8 419 aa19.46■□□□□ 0.71
PKD1-220ENST00000487932 KANK1Q14678 1352 aa19.46■□□□□ 0.71
PKD1-220ENST00000487932 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
PKD1-220ENST00000487932 FRAT2O75474 233 aaPredicted RBP19.42■□□□□ 0.7
PKD1-220ENST00000487932 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
PKD1-220ENST00000487932 MSH5O43196 834 aa19.42■□□□□ 0.7
PKD1-220ENST00000487932 TOMM22Q9NS69 142 aa19.41■□□□□ 0.7
PKD1-220ENST00000487932 PPP4R2Q9NY27 417 aa19.4■□□□□ 0.7
PKD1-220ENST00000487932 GTF2E1P29083 439 aaPredicted RBP19.39■□□□□ 0.69
PKD1-220ENST00000487932 ITPRIPQ8IWB1 547 aa19.38■□□□□ 0.69
PKD1-220ENST00000487932 MARCH6O60337 910 aa19.38■□□□□ 0.69
PKD1-220ENST00000487932 NOL8Q76FK4 1167 aaKnown RBP19.38■□□□□ 0.69
PKD1-220ENST00000487932 GZF1Q9H116 711 aaPredicted RBP19.37■□□□□ 0.69
PKD1-220ENST00000487932 TRIM6-TRIM34B2RNG4 842 aa19.36■□□□□ 0.69
PKD1-220ENST00000487932 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
PKD1-220ENST00000487932 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.69
PKD1-220ENST00000487932 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.69
PKD1-220ENST00000487932 NUTM2DQ5VT03 806 aaPredicted RBP19.33■□□□□ 0.69
PKD1-220ENST00000487932 RAD21O60216 631 aa19.33■□□□□ 0.68
PKD1-220ENST00000487932 SLC4A10Q6U841 1118 aa19.33■□□□□ 0.68
PKD1-220ENST00000487932 NUTM2FA1L443 756 aa19.33■□□□□ 0.68
PKD1-220ENST00000487932 CEP89Q96ST8 783 aa19.32■□□□□ 0.68
PKD1-220ENST00000487932 EIF4G1Q04637 1599 aaKnown RBP19.32■□□□□ 0.68
PKD1-220ENST00000487932 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
PKD1-220ENST00000487932 TPM4P67936 248 aa19.31■□□□□ 0.68
PKD1-220ENST00000487932 IPO8O15397 1037 aaKnown RBP19.3■□□□□ 0.68
PKD1-220ENST00000487932 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
PKD1-220ENST00000487932 GPATCH3Q96I76 525 aa19.29■□□□□ 0.68
PKD1-220ENST00000487932 FOXD4L1Q9NU39 408 aa19.29■□□□□ 0.68
PKD1-220ENST00000487932 PES1O00541 588 aaKnown RBP19.29■□□□□ 0.68
PKD1-220ENST00000487932 STK31Q9BXU1 1019 aa19.29■□□□□ 0.68
PKD1-220ENST00000487932 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
PKD1-220ENST00000487932 CNKSR2Q8WXI2 1034 aa19.27■□□□□ 0.68
PKD1-220ENST00000487932 SPAG9O60271 1321 aaKnown RBP19.26■□□□□ 0.67
PKD1-220ENST00000487932 SLKQ9H2G2 1235 aaPredicted RBP19.25■□□□□ 0.67
PKD1-220ENST00000487932 NGDNQ8NEJ9 315 aaKnown RBP19.25■□□□□ 0.67
PKD1-220ENST00000487932 FOXD4L5Q5VV16 416 aaPredicted RBP19.24■□□□□ 0.67
PKD1-220ENST00000487932 FOXD4L4Q8WXT5 416 aaPredicted RBP19.24■□□□□ 0.67
PKD1-220ENST00000487932 CFAP44Q96MT7 982 aa19.24■□□□□ 0.67
PKD1-220ENST00000487932 MFAP1P55081 439 aaKnown RBP19.23■□□□□ 0.67
PKD1-220ENST00000487932 FOXD1Q16676 465 aa19.23■□□□□ 0.67
PKD1-220ENST00000487932 DCAF1Q9Y4B6 1507 aa19.22■□□□□ 0.67
PKD1-220ENST00000487932 FBXW7Q969H0 707 aa19.22■□□□□ 0.67
PKD1-220ENST00000487932 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
PKD1-220ENST00000487932 CTDP1Q9Y5B0 961 aaPredicted RBP19.21■□□□□ 0.67
PKD1-220ENST00000487932 AMPHP49418 695 aa19.2■□□□□ 0.66
PKD1-220ENST00000487932 GOLGA6L1Q8N7Z2 621 aa19.2■□□□□ 0.66
PKD1-220ENST00000487932 TCEAL9Q9UHQ7 104 aa19.2■□□□□ 0.66
PKD1-220ENST00000487932 CALD1Q05682 793 aaKnown RBP19.2■□□□□ 0.66
PKD1-220ENST00000487932 CCDC34Q96HJ3 373 aa19.2■□□□□ 0.66
PKD1-220ENST00000487932 EVA1CP58658 441 aa19.19■□□□□ 0.66
PKD1-220ENST00000487932 MEX3CQ5U5Q3 659 aaKnown RBP19.19■□□□□ 0.66
PKD1-220ENST00000487932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
PKD1-220ENST00000487932 GOLGA3Q08378 1498 aa19.19■□□□□ 0.66
PKD1-220ENST00000487932 TRIM34Q9BYJ4 488 aa19.18■□□□□ 0.66
PKD1-220ENST00000487932 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
PKD1-220ENST00000487932 NGEFQ8N5V2 710 aa19.18■□□□□ 0.66
PKD1-220ENST00000487932 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
PKD1-220ENST00000487932 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
PKD1-220ENST00000487932 TPD52L1Q16890 204 aaPredicted RBP19.17■□□□□ 0.66
PKD1-220ENST00000487932 CWC22Q9HCG8 908 aaKnown RBP19.17■□□□□ 0.66
PKD1-220ENST00000487932 SMC4Q9NTJ3 1288 aa19.17■□□□□ 0.66
PKD1-220ENST00000487932 EID1Q9Y6B2 187 aa19.17■□□□□ 0.66
PKD1-220ENST00000487932 TNNT3P45378 269 aaPredicted RBP19.17■□□□□ 0.66
PKD1-220ENST00000487932 SAMD1Q6SPF0 538 aaPredicted RBP19.16■□□□□ 0.66
PKD1-220ENST00000487932 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
PKD1-220ENST00000487932 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
PKD1-220ENST00000487932 SF3A1Q15459 793 aaKnown RBP19.15■□□□□ 0.66
PKD1-220ENST00000487932 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
PKD1-220ENST00000487932 SYAP1Q96A49 352 aaPredicted RBP19.15■□□□□ 0.66
PKD1-220ENST00000487932 TPM3P06753 285 aa19.15■□□□□ 0.66
PKD1-220ENST00000487932 KTN1Q86UP2 1357 aaKnown RBP19.14■□□□□ 0.66
PKD1-220ENST00000487932 CLUAP1Q96AJ1 413 aa19.14■□□□□ 0.65
PKD1-220ENST00000487932 PKD2Q13563 968 aa19.12■□□□□ 0.65
PKD1-220ENST00000487932 SYTL4Q96C24 671 aaPredicted RBP19.11■□□□□ 0.65
PKD1-220ENST00000487932 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
PKD1-220ENST00000487932 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
PKD1-220ENST00000487932 HMMRO75330 724 aa19.1■□□□□ 0.65
PKD1-220ENST00000487932 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
PKD1-220ENST00000487932 FOXD4L6Q3SYB3 417 aaPredicted RBP19.09■□□□□ 0.65
PKD1-220ENST00000487932 FOXD4L3Q6VB84 417 aaPredicted RBP19.09■□□□□ 0.65
PKD1-220ENST00000487932 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
PKD1-220ENST00000487932 H3BQV1 296 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms