RNA–Protein interactions for RNA: ENST00000487703.5

CDK5-205, Transcript of cyclin dependent kinase 5, humanhuman

TSL 5

Gene CDK5, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-205ENST00000487703 MYO5CQ9NQX4 1742 aa20.31■□□□□ 0.84
CDK5-205ENST00000487703 POGZQ7Z3K3 1410 aa20.31■□□□□ 0.84
CDK5-205ENST00000487703 SCAPERQ9BY12 1400 aa20.31■□□□□ 0.84
CDK5-205ENST00000487703 ATP1B4Q9UN42 357 aaPredicted RBP20.29■□□□□ 0.84
CDK5-205ENST00000487703 KIF14Q15058 1648 aa20.28■□□□□ 0.84
CDK5-205ENST00000487703 CDK11AQ9UQ88 783 aaPredicted RBP20.28■□□□□ 0.84
CDK5-205ENST00000487703 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.84
CDK5-205ENST00000487703 EFCAB2Q5VUJ9 269 aa20.27■□□□□ 0.84
CDK5-205ENST00000487703 TROQ12816 1431 aaPredicted RBP20.26■□□□□ 0.83
CDK5-205ENST00000487703 FER1L4A9Z1Z3 1794 aa20.23■□□□□ 0.83
CDK5-205ENST00000487703 ATP10AO60312 1499 aa20.23■□□□□ 0.83
CDK5-205ENST00000487703 FBXO41Q8TF61 875 aa20.21■□□□□ 0.83
CDK5-205ENST00000487703 CLIP1P30622 1438 aa20.2■□□□□ 0.82
CDK5-205ENST00000487703 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
CDK5-205ENST00000487703 MLECQ14165 292 aa20.2■□□□□ 0.82
CDK5-205ENST00000487703 ARHGEF12Q9NZN5 1544 aa20.2■□□□□ 0.82
CDK5-205ENST00000487703 ZNF518AQ6AHZ1 1483 aa20.19■□□□□ 0.82
CDK5-205ENST00000487703 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
CDK5-205ENST00000487703 KDM5CP41229 1560 aa20.19■□□□□ 0.82
CDK5-205ENST00000487703 CDC42BPBQ9Y5S2 1711 aa20.18■□□□□ 0.82
CDK5-205ENST00000487703 HSPA2P54652 639 aa20.16■□□□□ 0.82
CDK5-205ENST00000487703 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
CDK5-205ENST00000487703 AFAP1Q8N556 730 aa20.15■□□□□ 0.82
CDK5-205ENST00000487703 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
CDK5-205ENST00000487703 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
CDK5-205ENST00000487703 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
CDK5-205ENST00000487703 REREQ9P2R6 1566 aa20.12■□□□□ 0.81
CDK5-205ENST00000487703 DIP2CQ9Y2E4 1556 aa20.11■□□□□ 0.81
CDK5-205ENST00000487703 MLH3Q9UHC1 1453 aa20.11■□□□□ 0.81
CDK5-205ENST00000487703 ABCC1P33527 1531 aa20.09■□□□□ 0.81
CDK5-205ENST00000487703 PREX1Q8TCU6 1659 aa20.08■□□□□ 0.81
CDK5-205ENST00000487703 ABCA6Q8N139 1617 aa20.08■□□□□ 0.8
CDK5-205ENST00000487703 CDC42BPAQ5VT25 1732 aa20.07■□□□□ 0.8
CDK5-205ENST00000487703 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
CDK5-205ENST00000487703 TRAPPC8Q9Y2L5 1435 aa20.07■□□□□ 0.8
CDK5-205ENST00000487703 FYCO1Q9BQS8 1478 aa20.06■□□□□ 0.8
CDK5-205ENST00000487703 CEBPAP49715 358 aaPredicted RBP20.05■□□□□ 0.8
CDK5-205ENST00000487703 AGLP35573 1532 aa20.04■□□□□ 0.8
CDK5-205ENST00000487703 MYT1LQ9UL68 1186 aa20.04■□□□□ 0.8
CDK5-205ENST00000487703 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
CDK5-205ENST00000487703 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
CDK5-205ENST00000487703 C3P01024 1663 aa20■□□□□ 0.79
CDK5-205ENST00000487703 GPATCH8Q9UKJ3 1502 aaKnown RBP19.98■□□□□ 0.79
CDK5-205ENST00000487703 SAMD9LQ8IVG5 1584 aa19.98■□□□□ 0.79
CDK5-205ENST00000487703 STRCQ7RTU9 1775 aa19.98■□□□□ 0.79
CDK5-205ENST00000487703 UHRF1BP1Q6BDS2 1440 aa19.97■□□□□ 0.79
CDK5-205ENST00000487703 CERKQ8TCT0 537 aa19.96■□□□□ 0.79
CDK5-205ENST00000487703 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
CDK5-205ENST00000487703 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
CDK5-205ENST00000487703 ESF1Q9H501 851 aaKnown RBP19.91■□□□□ 0.78
CDK5-205ENST00000487703 DMRT2Q9Y5R5 561 aa19.91■□□□□ 0.78
CDK5-205ENST00000487703 CNTLNQ9NXG0 1405 aa19.91■□□□□ 0.78
CDK5-205ENST00000487703 KIAA1107Q9UPP5 1409 aa19.91■□□□□ 0.78
CDK5-205ENST00000487703 HNRNPMP52272 730 aaKnown RBP eCLIP19.89■□□□□ 0.77
CDK5-205ENST00000487703 MROH2AA6NES4 1674 aa19.88■□□□□ 0.77
CDK5-205ENST00000487703 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
CDK5-205ENST00000487703 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
CDK5-205ENST00000487703 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
CDK5-205ENST00000487703 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
CDK5-205ENST00000487703 ATP7AQ04656 1500 aa19.86■□□□□ 0.77
CDK5-205ENST00000487703 SUPT6HQ7KZ85 1726 aaKnown RBP19.86■□□□□ 0.77
CDK5-205ENST00000487703 PLXNC1O60486 1568 aa19.86■□□□□ 0.77
CDK5-205ENST00000487703 PTPRTO14522 1441 aa19.85■□□□□ 0.77
CDK5-205ENST00000487703 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
CDK5-205ENST00000487703 MTUS2Q5JR59 1369 aa19.84■□□□□ 0.77
CDK5-205ENST00000487703 NPATQ14207 1427 aa19.84■□□□□ 0.77
CDK5-205ENST00000487703 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
CDK5-205ENST00000487703 A2MP01023 1474 aa19.82■□□□□ 0.76
CDK5-205ENST00000487703 TIAM1Q13009 1591 aa19.81■□□□□ 0.76
CDK5-205ENST00000487703 NCOA1Q15788 1441 aa19.8■□□□□ 0.76
CDK5-205ENST00000487703 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
CDK5-205ENST00000487703 CLTCQ00610 1675 aaKnown RBP19.79■□□□□ 0.76
CDK5-205ENST00000487703 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
CDK5-205ENST00000487703 ADGBQ8N7X0 1667 aa19.78■□□□□ 0.76
CDK5-205ENST00000487703 ZNF644Q9H582 1327 aaPredicted RBP19.77■□□□□ 0.76
CDK5-205ENST00000487703 CEP162Q5TB80 1403 aa19.76■□□□□ 0.75
CDK5-205ENST00000487703 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
CDK5-205ENST00000487703 LTBP4Q8N2S1 1624 aa19.76■□□□□ 0.75
CDK5-205ENST00000487703 PPP6R1Q9UPN7 881 aa19.74■□□□□ 0.75
CDK5-205ENST00000487703 RTEL1-TNFRSF6BF6WH68 1400 aa19.74■□□□□ 0.75
CDK5-205ENST00000487703 PTPRKQ15262 1439 aa19.74■□□□□ 0.75
CDK5-205ENST00000487703 ZNF142P52746 1687 aaPredicted RBP19.73■□□□□ 0.75
CDK5-205ENST00000487703 GGT6Q6P531 493 aa19.73■□□□□ 0.75
CDK5-205ENST00000487703 MYO3AQ8NEV4 1616 aa19.73■□□□□ 0.75
CDK5-205ENST00000487703 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
CDK5-205ENST00000487703 CEP170BQ9Y4F5 1589 aaPredicted RBP19.69■□□□□ 0.74
CDK5-205ENST00000487703 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
CDK5-205ENST00000487703 DHX29Q7Z478 1369 aaKnown RBP19.68■□□□□ 0.74
CDK5-205ENST00000487703 NCOA2Q15596 1464 aa19.67■□□□□ 0.74
CDK5-205ENST00000487703 NCKAP5LQ9HCH0 1330 aa19.67■□□□□ 0.74
CDK5-205ENST00000487703 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
CDK5-205ENST00000487703 RSPH4AQ5TD94 716 aa19.65■□□□□ 0.74
CDK5-205ENST00000487703 CAMSAP2Q08AD1 1489 aa19.65■□□□□ 0.74
CDK5-205ENST00000487703 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
CDK5-205ENST00000487703 PKD2Q13563 968 aa19.64■□□□□ 0.73
CDK5-205ENST00000487703 FAM135AQ9P2D6 1515 aa19.61■□□□□ 0.73
CDK5-205ENST00000487703 ARHGEF5Q12774 1597 aa19.61■□□□□ 0.73
CDK5-205ENST00000487703 A2ML1A8K2U0 1454 aa19.6■□□□□ 0.73
CDK5-205ENST00000487703 KIF3BO15066 747 aa19.6■□□□□ 0.73
CDK5-205ENST00000487703 DNMT1P26358 1616 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms