RNA–Protein interactions for RNA: ENST00000487519.5

TFAM-204, Transcript of transcription factor A, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAM, Length 5,414 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-204ENST00000487519 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
TFAM-204ENST00000487519 APBB1O00213 710 aa17.89■□□□□ 0.45
TFAM-204ENST00000487519 HDGFL2Q7Z4V5 671 aaPredicted RBP17.88■□□□□ 0.45
TFAM-204ENST00000487519 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
TFAM-204ENST00000487519 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
TFAM-204ENST00000487519 ZNF330Q9Y3S2 320 aaPredicted RBP17.86■□□□□ 0.45
TFAM-204ENST00000487519 ARHGAP35Q9NRY4 1499 aa17.86■□□□□ 0.45
TFAM-204ENST00000487519 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
TFAM-204ENST00000487519 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.45
TFAM-204ENST00000487519 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
TFAM-204ENST00000487519 TIMELESSQ9UNS1 1208 aa17.84■□□□□ 0.45
TFAM-204ENST00000487519 CARMIL2Q6F5E8 1435 aa17.84■□□□□ 0.45
TFAM-204ENST00000487519 EFCAB2Q5VUJ9 269 aa17.84■□□□□ 0.45
TFAM-204ENST00000487519 NUP155O75694 1391 aa17.84■□□□□ 0.45
TFAM-204ENST00000487519 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.45
TFAM-204ENST00000487519 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
TFAM-204ENST00000487519 KTN1Q86UP2 1357 aaKnown RBP17.82■□□□□ 0.44
TFAM-204ENST00000487519 ISY1Q9ULR0 285 aaKnown RBP17.82■□□□□ 0.44
TFAM-204ENST00000487519 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
TFAM-204ENST00000487519 KIF3BO15066 747 aa17.81■□□□□ 0.44
TFAM-204ENST00000487519 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
TFAM-204ENST00000487519 NUTM2DQ5VT03 806 aaPredicted RBP17.8■□□□□ 0.44
TFAM-204ENST00000487519 HSCBQ8IWL3 235 aa17.8■□□□□ 0.44
TFAM-204ENST00000487519 ROCK2O75116 1388 aaKnown RBP17.8■□□□□ 0.44
TFAM-204ENST00000487519 VPS8Q8N3P4 1428 aa17.79■□□□□ 0.44
TFAM-204ENST00000487519 RTN4Q9NQC3 1192 aaKnown RBP17.77■□□□□ 0.44
TFAM-204ENST00000487519 CCER2I3L3R5 266 aa17.76■□□□□ 0.43
TFAM-204ENST00000487519 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.431e-7■□□□□ 8.5
TFAM-204ENST00000487519 MCCP23508 829 aa17.76■□□□□ 0.43
TFAM-204ENST00000487519 ABCC8Q09428 1581 aa17.76■□□□□ 0.43
TFAM-204ENST00000487519 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
TFAM-204ENST00000487519 ERICH6BQ5W0A0 696 aa17.75■□□□□ 0.43
TFAM-204ENST00000487519 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
TFAM-204ENST00000487519 CCDC88BA6NC98 1476 aa17.74■□□□□ 0.43
TFAM-204ENST00000487519 ITPRIPQ8IWB1 547 aa17.74■□□□□ 0.43
TFAM-204ENST00000487519 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
TFAM-204ENST00000487519 ANKRD30AQ9BXX3 1397 aa17.73■□□□□ 0.43
TFAM-204ENST00000487519 NUTM2FA1L443 756 aa17.73■□□□□ 0.43
TFAM-204ENST00000487519 NAP1L5Q96NT1 182 aaPredicted RBP17.72■□□□□ 0.43
TFAM-204ENST00000487519 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
TFAM-204ENST00000487519 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
TFAM-204ENST00000487519 CLSTN1O94985 981 aa17.7■□□□□ 0.42
TFAM-204ENST00000487519 RCAN3Q9UKA8 241 aa17.7■□□□□ 0.42
TFAM-204ENST00000487519 KIAA1211Q6ZU35 1233 aa17.7■□□□□ 0.42
TFAM-204ENST00000487519 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
TFAM-204ENST00000487519 WASHC2CQ9Y4E1 1318 aa17.69■□□□□ 0.42
TFAM-204ENST00000487519 MROH2BQ7Z745 1585 aa17.69■□□□□ 0.42
TFAM-204ENST00000487519 CALD1Q05682 793 aaKnown RBP17.69■□□□□ 0.42
TFAM-204ENST00000487519 NRDCO43847 1150 aa17.69■□□□□ 0.42
TFAM-204ENST00000487519 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
TFAM-204ENST00000487519 RALBP1Q15311 655 aa17.68■□□□□ 0.42
TFAM-204ENST00000487519 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
TFAM-204ENST00000487519 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
TFAM-204ENST00000487519 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
TFAM-204ENST00000487519 STK31Q9BXU1 1019 aa17.67■□□□□ 0.42
TFAM-204ENST00000487519 CHMP3Q9Y3E7 222 aa17.66■□□□□ 0.42
TFAM-204ENST00000487519 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
TFAM-204ENST00000487519 TERF2IPQ9NYB0 399 aa17.66■□□□□ 0.42
TFAM-204ENST00000487519 CCDC146Q8IYE0 955 aa17.66■□□□□ 0.42
TFAM-204ENST00000487519 EID1Q9Y6B2 187 aa17.66■□□□□ 0.42
TFAM-204ENST00000487519 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
TFAM-204ENST00000487519 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
TFAM-204ENST00000487519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.41
TFAM-204ENST00000487519 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
TFAM-204ENST00000487519 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
TFAM-204ENST00000487519 FHOD3Q2V2M9 1422 aa17.63■□□□□ 0.41
TFAM-204ENST00000487519 EIF3AQ14152 1382 aaKnown RBP17.63■□□□□ 0.41
TFAM-204ENST00000487519 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
TFAM-204ENST00000487519 SLC4A10Q6U841 1118 aa17.63■□□□□ 0.41
TFAM-204ENST00000487519 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
TFAM-204ENST00000487519 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
TFAM-204ENST00000487519 AMPHP49418 695 aa17.61■□□□□ 0.41
TFAM-204ENST00000487519 DRC7Q8IY82 874 aa17.61■□□□□ 0.41
TFAM-204ENST00000487519 SLKQ9H2G2 1235 aaPredicted RBP17.6■□□□□ 0.41
TFAM-204ENST00000487519 JPH4Q96JJ6 628 aa17.6■□□□□ 0.41
TFAM-204ENST00000487519 TAF7LQ5H9L4 462 aa17.6■□□□□ 0.41
TFAM-204ENST00000487519 SMARCA2P51531 1590 aa17.58■□□□□ 0.4
TFAM-204ENST00000487519 RBM19Q9Y4C8 960 aaKnown RBP17.58■□□□□ 0.4
TFAM-204ENST00000487519 TRIM6-TRIM34B2RNG4 842 aa17.57■□□□□ 0.4
TFAM-204ENST00000487519 MFAP1P55081 439 aaKnown RBP17.56■□□□□ 0.4
TFAM-204ENST00000487519 TMX4Q9H1E5 349 aaPredicted RBP17.55■□□□□ 0.4
TFAM-204ENST00000487519 CHMP4AQ9BY43 222 aa17.55■□□□□ 0.4
TFAM-204ENST00000487519 NLRP13Q86W25 1043 aa17.55■□□□□ 0.4
TFAM-204ENST00000487519 GZF1Q9H116 711 aaPredicted RBP17.55■□□□□ 0.4
TFAM-204ENST00000487519 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
TFAM-204ENST00000487519 CHAF1AQ13111 956 aaPredicted RBP17.54■□□□□ 0.4
TFAM-204ENST00000487519 RSPH4AQ5TD94 716 aa17.54■□□□□ 0.4
TFAM-204ENST00000487519 MSNP26038 577 aaKnown RBP17.54■□□□□ 0.4
TFAM-204ENST00000487519 HMMRO75330 724 aa17.52■□□□□ 0.4
TFAM-204ENST00000487519 AMER1Q5JTC6 1135 aaPredicted RBP17.52■□□□□ 0.4
TFAM-204ENST00000487519 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.4
TFAM-204ENST00000487519 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.39
TFAM-204ENST00000487519 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
TFAM-204ENST00000487519 NOL8Q76FK4 1167 aaKnown RBP17.51■□□□□ 0.39
TFAM-204ENST00000487519 CADPSQ9ULU8 1353 aa17.51■□□□□ 0.39
TFAM-204ENST00000487519 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
TFAM-204ENST00000487519 RAPGEF2Q9Y4G8 1499 aa17.51■□□□□ 0.39
TFAM-204ENST00000487519 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
TFAM-204ENST00000487519 L1TD1Q5T7N2 865 aaKnown RBP17.5■□□□□ 0.39
TFAM-204ENST00000487519 CCDC18Q5T9S5 1454 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms