RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
RTFDC1-209ENST00000487211 MFSD10Q14728 455 aa11.9□□□□□ -0.5
RTFDC1-209ENST00000487211 POTEHQ6S545 545 aa11.9□□□□□ -0.5
RTFDC1-209ENST00000487211 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-209ENST00000487211 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
RTFDC1-209ENST00000487211 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
RTFDC1-209ENST00000487211 IER5LQ5T953 404 aa11.89□□□□□ -0.51
RTFDC1-209ENST00000487211 OCEL1Q9H607 264 aa11.89□□□□□ -0.51
RTFDC1-209ENST00000487211 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
RTFDC1-209ENST00000487211 DCBLD2Q96PD2 775 aa11.86□□□□□ -0.51
RTFDC1-209ENST00000487211 PLCG2P16885 1265 aa11.84□□□□□ -0.51
RTFDC1-209ENST00000487211 G3V3G9 751 aa11.83□□□□□ -0.52
RTFDC1-209ENST00000487211 GPHNQ9NQX3 736 aaPredicted RBP11.83□□□□□ -0.52
RTFDC1-209ENST00000487211 BOLA1Q9Y3E2 137 aa11.82□□□□□ -0.52
RTFDC1-209ENST00000487211 PPP1R15BQ5SWA1 713 aa11.81□□□□□ -0.52
RTFDC1-209ENST00000487211 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-209ENST00000487211 SEC24BO95487 1268 aa11.79□□□□□ -0.52
RTFDC1-209ENST00000487211 CAMK2BQ13554 666 aa11.79□□□□□ -0.52
RTFDC1-209ENST00000487211 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-209ENST00000487211 TMC2Q8TDI7 906 aa11.79□□□□□ -0.52
RTFDC1-209ENST00000487211 SEMA3EO15041 775 aa11.78□□□□□ -0.52
RTFDC1-209ENST00000487211 LMOD2Q6P5Q4 547 aa11.77□□□□□ -0.53
RTFDC1-209ENST00000487211 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
RTFDC1-209ENST00000487211 TMEM121BQ9BXQ6 578 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-209ENST00000487211 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
RTFDC1-209ENST00000487211 DSG2Q14126 1118 aa11.75□□□□□ -0.53
RTFDC1-209ENST00000487211 ARIH1Q9Y4X5 557 aaPredicted RBP11.75□□□□□ -0.53
RTFDC1-209ENST00000487211 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
RTFDC1-209ENST00000487211 COLQQ9Y215 455 aaPredicted RBP11.74□□□□□ -0.53
RTFDC1-209ENST00000487211 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
RTFDC1-209ENST00000487211 TESPA1A2RU30 521 aaPredicted RBP11.73□□□□□ -0.53
RTFDC1-209ENST00000487211 FOXK1P85037 733 aa11.72□□□□□ -0.53
RTFDC1-209ENST00000487211 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
RTFDC1-209ENST00000487211 C7P10643 843 aa11.7□□□□□ -0.54
RTFDC1-209ENST00000487211 PLPP6Q8IY26 295 aa11.69□□□□□ -0.54
RTFDC1-209ENST00000487211 EMILIN3Q9NT22 766 aa11.69□□□□□ -0.54
RTFDC1-209ENST00000487211 KIF3CO14782 793 aa11.68□□□□□ -0.54
RTFDC1-209ENST00000487211 SMYD5Q6GMV2 418 aa11.68□□□□□ -0.54
RTFDC1-209ENST00000487211 METRNQ9UJH8 293 aa11.68□□□□□ -0.54
RTFDC1-209ENST00000487211 DPYSL4O14531 572 aa11.67□□□□□ -0.54
RTFDC1-209ENST00000487211 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
RTFDC1-209ENST00000487211 POTEFA5A3E0 1075 aa11.66□□□□□ -0.54
RTFDC1-209ENST00000487211 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
RTFDC1-209ENST00000487211 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-209ENST00000487211 TMEM92Q6UXU6 159 aa11.64□□□□□ -0.55
RTFDC1-209ENST00000487211 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
RTFDC1-209ENST00000487211 SPDYE16A6NNV3 312 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-209ENST00000487211 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
RTFDC1-209ENST00000487211 PDIA6Q15084 440 aa11.59□□□□□ -0.55
RTFDC1-209ENST00000487211 C3orf67Q6ZVT6 689 aa11.59□□□□□ -0.55
RTFDC1-209ENST00000487211 ZC3H15Q8WU90 426 aaKnown RBP11.59□□□□□ -0.55
RTFDC1-209ENST00000487211 MAP3K9P80192 1104 aa11.57□□□□□ -0.56
RTFDC1-209ENST00000487211 UPF1Q92900 1129 aaKnown RBP eCLIP11.57□□□□□ -0.56
RTFDC1-209ENST00000487211 RBM26Q5T8P6 1007 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-209ENST00000487211 OXER1Q8TDS5 423 aa11.51□□□□□ -0.57
RTFDC1-209ENST00000487211 GPIHBP1Q8IV16 184 aa11.49□□□□□ -0.57
RTFDC1-209ENST00000487211 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.49□□□□□ -0.57
RTFDC1-209ENST00000487211 GRXCR2A6NFK2 248 aa11.48□□□□□ -0.57
RTFDC1-209ENST00000487211 ERCC6Q03468 1493 aa11.48□□□□□ -0.57
RTFDC1-209ENST00000487211 TBC1D12O60347 775 aa11.47□□□□□ -0.57
RTFDC1-209ENST00000487211 ZMYND10O75800 440 aa11.47□□□□□ -0.57
RTFDC1-209ENST00000487211 SLC24A3Q9HC58 644 aa11.46□□□□□ -0.57
RTFDC1-209ENST00000487211 EVI5O60447 810 aa11.43□□□□□ -0.58
RTFDC1-209ENST00000487211 PTCD2Q8WV60 388 aaKnown RBP11.43□□□□□ -0.58
RTFDC1-209ENST00000487211 DDX12PQ92771 950 aa11.42□□□□□ -0.58
RTFDC1-209ENST00000487211 ZNF316A6NFI3 1004 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-209ENST00000487211 SLC34A2O95436 690 aa11.41□□□□□ -0.58
RTFDC1-209ENST00000487211 BARGINQ6ZT62 677 aa11.41□□□□□ -0.58
RTFDC1-209ENST00000487211 PTGER2P43116 358 aa11.4□□□□□ -0.58
RTFDC1-209ENST00000487211 OSBPP22059 807 aa11.38□□□□□ -0.59
RTFDC1-209ENST00000487211 KRI1Q8N9T8 703 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-209ENST00000487211 NUTM2FA1L443 756 aa11.37□□□□□ -0.59
RTFDC1-209ENST00000487211 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
RTFDC1-209ENST00000487211 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
RTFDC1-209ENST00000487211 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
RTFDC1-209ENST00000487211 BRPF1P55201 1214 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-209ENST00000487211 THOC2Q8NI27 1593 aaKnown RBP11.35□□□□□ -0.59
RTFDC1-209ENST00000487211 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
RTFDC1-209ENST00000487211 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
RTFDC1-209ENST00000487211 NEUROD2Q15784 382 aa11.33□□□□□ -0.6
RTFDC1-209ENST00000487211 AK7Q96M32 723 aa11.33□□□□□ -0.6
RTFDC1-209ENST00000487211 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-209ENST00000487211 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
RTFDC1-209ENST00000487211 GPR37O15354 613 aa11.32□□□□□ -0.6
RTFDC1-209ENST00000487211 PRIM1P49642 420 aaKnown RBP11.3□□□□□ -0.6
RTFDC1-209ENST00000487211 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
RTFDC1-209ENST00000487211 SLAIN1Q8ND83 568 aa11.29□□□□□ -0.6
RTFDC1-209ENST00000487211 PHF14O94880 888 aa11.28□□□□□ -0.6
RTFDC1-209ENST00000487211 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
RTFDC1-209ENST00000487211 FCHSD2O94868 740 aa11.27□□□□□ -0.61
RTFDC1-209ENST00000487211 GNPATO15228 680 aa11.26□□□□□ -0.61
RTFDC1-209ENST00000487211 EPAS1Q99814 870 aa11.26□□□□□ -0.61
RTFDC1-209ENST00000487211 HIC1Q14526 733 aa11.25□□□□□ -0.61
RTFDC1-209ENST00000487211 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
RTFDC1-209ENST00000487211 MAMSTRQ6ZN01 415 aa11.25□□□□□ -0.61
RTFDC1-209ENST00000487211 RBM33Q96EV2 1170 aaKnown RBP11.24□□□□□ -0.61
RTFDC1-209ENST00000487211 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
RTFDC1-209ENST00000487211 TRIM66O15016 1216 aa11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 MAP3K7O43318 606 aa11.23□□□□□ -0.61
RTFDC1-209ENST00000487211 EN1Q05925 392 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms