RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 G3V3G9 751 aa11.12□□□□□ -0.63
PHTF1-211ENST00000486855 RNF25Q96BH1 459 aaPredicted RBP11.12□□□□□ -0.63
PHTF1-211ENST00000486855 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
PHTF1-211ENST00000486855 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
PHTF1-211ENST00000486855 DOK7Q18PE1 504 aa11.09□□□□□ -0.63
PHTF1-211ENST00000486855 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
PHTF1-211ENST00000486855 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
PHTF1-211ENST00000486855 ERBB3P21860 1342 aa11.06□□□□□ -0.64
PHTF1-211ENST00000486855 VARS2Q5ST30 1063 aaKnown RBP11.03□□□□□ -0.64
PHTF1-211ENST00000486855 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.02□□□□□ -0.65
PHTF1-211ENST00000486855 ZFP91Q96JP5 570 aaPredicted RBP11.02□□□□□ -0.65
PHTF1-211ENST00000486855 PHF8Q9UPP1 1060 aa11.02□□□□□ -0.65
PHTF1-211ENST00000486855 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
PHTF1-211ENST00000486855 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
PHTF1-211ENST00000486855 SOX12O15370 315 aa10.99□□□□□ -0.65
PHTF1-211ENST00000486855 SMARCA4P51532 1647 aa10.98□□□□□ -0.65
PHTF1-211ENST00000486855 ZSWIM6Q9HCJ5 1215 aa10.98□□□□□ -0.65
PHTF1-211ENST00000486855 RIMBP2O15034 1052 aa10.96□□□□□ -0.65
PHTF1-211ENST00000486855 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
PHTF1-211ENST00000486855 VGFO15240 615 aaPredicted RBP10.94□□□□□ -0.66
PHTF1-211ENST00000486855 RNF166Q96A37 237 aaPredicted RBP10.94□□□□□ -0.66
PHTF1-211ENST00000486855 FBXO22Q8NEZ5 403 aa10.93□□□□□ -0.66
PHTF1-211ENST00000486855 KHSRPQ92945 711 aaKnown RBP eCLIP10.91□□□□□ -0.66
PHTF1-211ENST00000486855 ARSIQ5FYB1 569 aa10.9□□□□□ -0.66
PHTF1-211ENST00000486855 PEG3Q9GZU2 1588 aa10.9□□□□□ -0.67
PHTF1-211ENST00000486855 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
PHTF1-211ENST00000486855 NCAPD3P42695 1498 aa10.88□□□□□ -0.67
PHTF1-211ENST00000486855 HMGXB3Q12766 1538 aa10.88□□□□□ -0.67
PHTF1-211ENST00000486855 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
PHTF1-211ENST00000486855 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
PHTF1-211ENST00000486855 SMARCA2P51531 1590 aa10.86□□□□□ -0.67
PHTF1-211ENST00000486855 KIF3CO14782 793 aa10.85□□□□□ -0.67
PHTF1-211ENST00000486855 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
PHTF1-211ENST00000486855 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
PHTF1-211ENST00000486855 ZNF316A6NFI3 1004 aaPredicted RBP10.83□□□□□ -0.68
PHTF1-211ENST00000486855 NLRP6P59044 892 aa10.83□□□□□ -0.68
PHTF1-211ENST00000486855 MROH2BQ7Z745 1585 aa10.82□□□□□ -0.68
PHTF1-211ENST00000486855 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
PHTF1-211ENST00000486855 C2orf72A6NCS6 295 aa10.78□□□□□ -0.68
PHTF1-211ENST00000486855 STK24Q9Y6E0 443 aa10.77□□□□□ -0.69
PHTF1-211ENST00000486855 WIZO95785 1651 aa10.76□□□□□ -0.69
PHTF1-211ENST00000486855 PTGER2P43116 358 aa10.76□□□□□ -0.69
PHTF1-211ENST00000486855 LSM11P83369 360 aaKnown RBP eCLIP10.76□□□□□ -0.69
PHTF1-211ENST00000486855 ANKRD13DQ6ZTN6 518 aa10.76□□□□□ -0.69
PHTF1-211ENST00000486855 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
PHTF1-211ENST00000486855 NUDT7P0C024 238 aa10.74□□□□□ -0.69
PHTF1-211ENST00000486855 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
PHTF1-211ENST00000486855 NESP48681 1621 aa10.72□□□□□ -0.69
PHTF1-211ENST00000486855 LHX6Q9UPM6 363 aa10.71□□□□□ -0.69
PHTF1-211ENST00000486855 THOC2Q8NI27 1593 aaKnown RBP10.7□□□□□ -0.7
PHTF1-211ENST00000486855 STK25O00506 426 aa10.7□□□□□ -0.7
PHTF1-211ENST00000486855 PCDHGA4Q9Y5G9 962 aa10.7□□□□□ -0.7
PHTF1-211ENST00000486855 SLC34A2O95436 690 aa10.69□□□□□ -0.7
PHTF1-211ENST00000486855 AXIN2Q9Y2T1 843 aa10.69□□□□□ -0.7
PHTF1-211ENST00000486855 LAMC3Q9Y6N6 1575 aa10.68□□□□□ -0.7
PHTF1-211ENST00000486855 PPP1R37O75864 691 aa10.66□□□□□ -0.7
PHTF1-211ENST00000486855 PBX2P40425 430 aa10.66□□□□□ -0.7
PHTF1-211ENST00000486855 KDM4FA0A1W2PPD8 638 aa10.65□□□□□ -0.7
PHTF1-211ENST00000486855 RGL2O15211 777 aa10.65□□□□□ -0.7
PHTF1-211ENST00000486855 TAOK2Q9UL54 1235 aa10.65□□□□□ -0.7
PHTF1-211ENST00000486855 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
PHTF1-211ENST00000486855 CUX2O14529 1486 aa10.64□□□□□ -0.71
PHTF1-211ENST00000486855 ECM2O94769 699 aaPredicted RBP10.64□□□□□ -0.71
PHTF1-211ENST00000486855 PKD2Q13563 968 aa10.64□□□□□ -0.71
PHTF1-211ENST00000486855 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
PHTF1-211ENST00000486855 TMC2Q8TDI7 906 aa10.58□□□□□ -0.72
PHTF1-211ENST00000486855 TOP2AP11388 1531 aaKnown RBP10.58□□□□□ -0.72
PHTF1-211ENST00000486855 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
PHTF1-211ENST00000486855 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
PHTF1-211ENST00000486855 DMRTA1Q5VZB9 504 aa10.55□□□□□ -0.72
PHTF1-211ENST00000486855 ARHGAP33O14559 1287 aa10.54□□□□□ -0.72
PHTF1-211ENST00000486855 PTCD2Q8WV60 388 aaKnown RBP10.54□□□□□ -0.72
PHTF1-211ENST00000486855 HRO43593 1189 aa10.53□□□□□ -0.72
PHTF1-211ENST00000486855 PLA2G2EQ9NZK7 142 aa10.52□□□□□ -0.73
PHTF1-211ENST00000486855 PSEN2P49810 448 aa10.51□□□□□ -0.73
PHTF1-211ENST00000486855 WDR62O43379 1518 aa10.51□□□□□ -0.73
PHTF1-211ENST00000486855 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
PHTF1-211ENST00000486855 FOXK1P85037 733 aa10.49□□□□□ -0.73
PHTF1-211ENST00000486855 HCSTQ9UBK5 93 aa10.49□□□□□ -0.73
PHTF1-211ENST00000486855 TK2O00142 265 aa10.48□□□□□ -0.73
PHTF1-211ENST00000486855 PSDA5PKW4 1024 aaPredicted RBP10.47□□□□□ -0.73
PHTF1-211ENST00000486855 PLPP6Q8IY26 295 aa10.47□□□□□ -0.73
PHTF1-211ENST00000486855 PDS5BQ9NTI5 1447 aa10.47□□□□□ -0.73
PHTF1-211ENST00000486855 CFTRP13569 1480 aa10.47□□□□□ -0.73
PHTF1-211ENST00000486855 DSG2Q14126 1118 aa10.46□□□□□ -0.73
PHTF1-211ENST00000486855 MRC2Q9UBG0 1479 aa10.46□□□□□ -0.74
PHTF1-211ENST00000486855 GPHNQ9NQX3 736 aaPredicted RBP10.45□□□□□ -0.74
PHTF1-211ENST00000486855 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
PHTF1-211ENST00000486855 FANCD2Q9BXW9 1451 aa10.42□□□□□ -0.74
PHTF1-211ENST00000486855 CEP164Q9UPV0 1460 aa10.42□□□□□ -0.74
PHTF1-211ENST00000486855 PPP4R3BQ5MIZ7 849 aa10.4□□□□□ -0.74
PHTF1-211ENST00000486855 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
PHTF1-211ENST00000486855 CCDC88BA6NC98 1476 aa10.4□□□□□ -0.74
PHTF1-211ENST00000486855 URB2Q14146 1524 aaKnown RBP10.39□□□□□ -0.75
PHTF1-211ENST00000486855 KCTD12Q96CX2 325 aaKnown RBP10.38□□□□□ -0.75
PHTF1-211ENST00000486855 OXER1Q8TDS5 423 aa10.36□□□□□ -0.75
PHTF1-211ENST00000486855 KCNK17Q96T54 332 aa10.36□□□□□ -0.75
PHTF1-211ENST00000486855 NKX1-1Q15270 411 aaPredicted RBP10.35□□□□□ -0.75
PHTF1-211ENST00000486855 VPS9D1Q9Y2B5 631 aa10.35□□□□□ -0.75
PHTF1-211ENST00000486855 CRISPLD2Q9H0B8 497 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms