RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 ITGAEP38570 1179 aa19.95■□□□□ 0.78
VTI1BP1-201ENST00000486325 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
VTI1BP1-201ENST00000486325 ARAP3Q8WWN8 1544 aa19.94■□□□□ 0.78
VTI1BP1-201ENST00000486325 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
VTI1BP1-201ENST00000486325 MYO5CQ9NQX4 1742 aa19.93■□□□□ 0.78
VTI1BP1-201ENST00000486325 PREX2Q70Z35 1606 aa19.92■□□□□ 0.78
VTI1BP1-201ENST00000486325 CD109Q6YHK3 1445 aa19.92■□□□□ 0.78
VTI1BP1-201ENST00000486325 ARHGAP5Q13017 1502 aa19.92■□□□□ 0.78
VTI1BP1-201ENST00000486325 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
VTI1BP1-201ENST00000486325 FAM69CQ0P6D2 419 aa19.9■□□□□ 0.78
VTI1BP1-201ENST00000486325 CAMSAP2Q08AD1 1489 aa19.9■□□□□ 0.78
VTI1BP1-201ENST00000486325 GLI2P10070 1586 aa19.9■□□□□ 0.78
VTI1BP1-201ENST00000486325 CDC42BPBQ9Y5S2 1711 aa19.9■□□□□ 0.78
VTI1BP1-201ENST00000486325 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
VTI1BP1-201ENST00000486325 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
VTI1BP1-201ENST00000486325 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
VTI1BP1-201ENST00000486325 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.77
VTI1BP1-201ENST00000486325 FANCAO15360 1455 aa19.84■□□□□ 0.77
VTI1BP1-201ENST00000486325 DAPK1P53355 1430 aa19.84■□□□□ 0.77
VTI1BP1-201ENST00000486325 ABCC5O15440 1437 aa19.83■□□□□ 0.76
VTI1BP1-201ENST00000486325 DNMT1P26358 1616 aaKnown RBP19.81■□□□□ 0.76
VTI1BP1-201ENST00000486325 HRCP23327 699 aa19.81■□□□□ 0.76
VTI1BP1-201ENST00000486325 SAMD9LQ8IVG5 1584 aa19.81■□□□□ 0.76
VTI1BP1-201ENST00000486325 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
VTI1BP1-201ENST00000486325 ARHGEF5Q12774 1597 aa19.8■□□□□ 0.76
VTI1BP1-201ENST00000486325 DIP2BQ9P265 1576 aa19.8■□□□□ 0.76
VTI1BP1-201ENST00000486325 PTPRKQ15262 1439 aa19.8■□□□□ 0.76
VTI1BP1-201ENST00000486325 AKNAQ7Z591 1439 aa19.79■□□□□ 0.76
VTI1BP1-201ENST00000486325 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
VTI1BP1-201ENST00000486325 ROCK1Q13464 1354 aa19.79■□□□□ 0.76
VTI1BP1-201ENST00000486325 NEO1Q92859 1461 aa19.78■□□□□ 0.76
VTI1BP1-201ENST00000486325 CFAP74Q9C0B2 1584 aa19.78■□□□□ 0.76
VTI1BP1-201ENST00000486325 ACIN1Q9UKV3 1341 aaKnown RBP19.77■□□□□ 0.76
VTI1BP1-201ENST00000486325 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
VTI1BP1-201ENST00000486325 MAP3K4Q9Y6R4 1608 aa19.77■□□□□ 0.76
VTI1BP1-201ENST00000486325 CCDC141Q6ZP82 1450 aa19.77■□□□□ 0.76
VTI1BP1-201ENST00000486325 SHANK2Q9UPX8 1470 aa19.75■□□□□ 0.75
VTI1BP1-201ENST00000486325 ANKRD30AQ9BXX3 1397 aa19.75■□□□□ 0.75
VTI1BP1-201ENST00000486325 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
VTI1BP1-201ENST00000486325 ADGRL1O94910 1474 aa19.74■□□□□ 0.75
VTI1BP1-201ENST00000486325 SYCP2Q9BX26 1530 aa19.74■□□□□ 0.75
VTI1BP1-201ENST00000486325 HFM1A2PYH4 1435 aa19.74■□□□□ 0.75
VTI1BP1-201ENST00000486325 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
VTI1BP1-201ENST00000486325 ABCC1P33527 1531 aa19.73■□□□□ 0.75
VTI1BP1-201ENST00000486325 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
VTI1BP1-201ENST00000486325 ARHGEF12Q9NZN5 1544 aa19.72■□□□□ 0.75
VTI1BP1-201ENST00000486325 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
VTI1BP1-201ENST00000486325 C9orf84Q5VXU9 1444 aa19.71■□□□□ 0.75
VTI1BP1-201ENST00000486325 ADGRL2O95490 1459 aa19.71■□□□□ 0.75
VTI1BP1-201ENST00000486325 NAIPQ13075 1403 aa19.69■□□□□ 0.74
VTI1BP1-201ENST00000486325 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
VTI1BP1-201ENST00000486325 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
VTI1BP1-201ENST00000486325 SPAG9O60271 1321 aaKnown RBP19.69■□□□□ 0.74
VTI1BP1-201ENST00000486325 RTEL1-TNFRSF6BF6WH68 1400 aa19.68■□□□□ 0.74
VTI1BP1-201ENST00000486325 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
VTI1BP1-201ENST00000486325 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
VTI1BP1-201ENST00000486325 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
VTI1BP1-201ENST00000486325 KIF13AQ9H1H9 1805 aa19.67■□□□□ 0.74
VTI1BP1-201ENST00000486325 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
VTI1BP1-201ENST00000486325 DENND4BO75064 1496 aaPredicted RBP19.66■□□□□ 0.74
VTI1BP1-201ENST00000486325 ZNF518AQ6AHZ1 1483 aa19.65■□□□□ 0.74
VTI1BP1-201ENST00000486325 ADGBQ8N7X0 1667 aa19.64■□□□□ 0.73
VTI1BP1-201ENST00000486325 MYT1LQ9UL68 1186 aa19.63■□□□□ 0.73
VTI1BP1-201ENST00000486325 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
VTI1BP1-201ENST00000486325 TSPOAP1O95153 1857 aa19.62■□□□□ 0.73
VTI1BP1-201ENST00000486325 POGZQ7Z3K3 1410 aa19.61■□□□□ 0.73
VTI1BP1-201ENST00000486325 KIF15Q9NS87 1388 aa19.61■□□□□ 0.73
VTI1BP1-201ENST00000486325 RAPGEF3O95398 923 aa19.59■□□□□ 0.73
VTI1BP1-201ENST00000486325 ANKRD50Q9ULJ7 1429 aa19.59■□□□□ 0.73
VTI1BP1-201ENST00000486325 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
VTI1BP1-201ENST00000486325 GCC2Q8IWJ2 1684 aa19.59■□□□□ 0.73
VTI1BP1-201ENST00000486325 MLH3Q9UHC1 1453 aa19.57■□□□□ 0.72
VTI1BP1-201ENST00000486325 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
VTI1BP1-201ENST00000486325 KDM5CP41229 1560 aa19.55■□□□□ 0.72
VTI1BP1-201ENST00000486325 TRIM52Q96A61 297 aa19.55■□□□□ 0.72
VTI1BP1-201ENST00000486325 DUOX2Q9NRD8 1548 aa19.55■□□□□ 0.72
VTI1BP1-201ENST00000486325 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
VTI1BP1-201ENST00000486325 CLSPNQ9HAW4 1339 aa19.53■□□□□ 0.72
VTI1BP1-201ENST00000486325 ZFYVE16Q7Z3T8 1539 aa19.52■□□□□ 0.72
VTI1BP1-201ENST00000486325 DHX57Q6P158 1386 aaKnown RBP19.51■□□□□ 0.71
VTI1BP1-201ENST00000486325 DHX29Q7Z478 1369 aaKnown RBP19.51■□□□□ 0.71
VTI1BP1-201ENST00000486325 MAGI2Q86UL8 1455 aa19.51■□□□□ 0.71
VTI1BP1-201ENST00000486325 INO80Q9ULG1 1556 aaPredicted RBP19.51■□□□□ 0.71
VTI1BP1-201ENST00000486325 ERBINQ96RT1 1412 aa19.51■□□□□ 0.71
VTI1BP1-201ENST00000486325 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
VTI1BP1-201ENST00000486325 RICTORQ6R327 1708 aa19.49■□□□□ 0.71
VTI1BP1-201ENST00000486325 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
VTI1BP1-201ENST00000486325 KIDINS220Q9ULH0 1771 aa19.47■□□□□ 0.71
VTI1BP1-201ENST00000486325 MPHOSPH9Q99550 1183 aa19.46■□□□□ 0.71
VTI1BP1-201ENST00000486325 KDM6BO15054 1643 aa19.46■□□□□ 0.71
VTI1BP1-201ENST00000486325 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
VTI1BP1-201ENST00000486325 A2MP01023 1474 aa19.44■□□□□ 0.7
VTI1BP1-201ENST00000486325 NUP155O75694 1391 aa19.44■□□□□ 0.7
VTI1BP1-201ENST00000486325 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
VTI1BP1-201ENST00000486325 SLC4A1APQ9BWU0 796 aaKnown RBP19.43■□□□□ 0.7
VTI1BP1-201ENST00000486325 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
VTI1BP1-201ENST00000486325 KIF3BO15066 747 aa19.42■□□□□ 0.7
VTI1BP1-201ENST00000486325 ATP10AO60312 1499 aa19.4■□□□□ 0.7
VTI1BP1-201ENST00000486325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
VTI1BP1-201ENST00000486325 KANK1Q14678 1352 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms