RNA–Protein interactions for RNA: ENST00000486308.1

APH1A-207, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-207ENST00000486308 CDC42BPBQ9Y5S2 1711 aa11.76□□□□□ -0.53
APH1A-207ENST00000486308 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
APH1A-207ENST00000486308 CDC42BPAQ5VT25 1732 aa11.75□□□□□ -0.53
APH1A-207ENST00000486308 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
APH1A-207ENST00000486308 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
APH1A-207ENST00000486308 RAPGEF3O95398 923 aa11.74□□□□□ -0.53
APH1A-207ENST00000486308 DENND4BO75064 1496 aaPredicted RBP11.74□□□□□ -0.53
APH1A-207ENST00000486308 NCOA2Q15596 1464 aa11.73□□□□□ -0.53
APH1A-207ENST00000486308 KANK4Q5T7N3 995 aaPredicted RBP11.73□□□□□ -0.53
APH1A-207ENST00000486308 RICTORQ6R327 1708 aa11.73□□□□□ -0.53
APH1A-207ENST00000486308 CCNB3Q8WWL7 1395 aa11.73□□□□□ -0.53
APH1A-207ENST00000486308 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
APH1A-207ENST00000486308 SUPT6HQ7KZ85 1726 aaKnown RBP11.72□□□□□ -0.53
APH1A-207ENST00000486308 POGZQ7Z3K3 1410 aa11.72□□□□□ -0.53
APH1A-207ENST00000486308 ABCC1P33527 1531 aa11.71□□□□□ -0.53
APH1A-207ENST00000486308 ZMYM4Q5VZL5 1548 aa11.7□□□□□ -0.54
APH1A-207ENST00000486308 SAMD9LQ8IVG5 1584 aa11.7□□□□□ -0.54
APH1A-207ENST00000486308 ARHGEF12Q9NZN5 1544 aa11.7□□□□□ -0.54
APH1A-207ENST00000486308 ITSN2Q9NZM3 1697 aa11.69□□□□□ -0.54
APH1A-207ENST00000486308 APLP2Q06481 763 aa11.69□□□□□ -0.54
APH1A-207ENST00000486308 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
APH1A-207ENST00000486308 ZNF518AQ6AHZ1 1483 aa11.68□□□□□ -0.54
APH1A-207ENST00000486308 KDM5CP41229 1560 aa11.67□□□□□ -0.54
APH1A-207ENST00000486308 SYCP2Q9BX26 1530 aa11.67□□□□□ -0.54
APH1A-207ENST00000486308 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
APH1A-207ENST00000486308 TRAPPC8Q9Y2L5 1435 aa11.67□□□□□ -0.54
APH1A-207ENST00000486308 ARHGEF40Q8TER5 1519 aa11.66□□□□□ -0.54
APH1A-207ENST00000486308 MAGI2Q86UL8 1455 aa11.66□□□□□ -0.54
APH1A-207ENST00000486308 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
APH1A-207ENST00000486308 KIAA1107Q9UPP5 1409 aa11.66□□□□□ -0.54
APH1A-207ENST00000486308 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.54
APH1A-207ENST00000486308 AFAP1Q8N556 730 aa11.65□□□□□ -0.54
APH1A-207ENST00000486308 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
APH1A-207ENST00000486308 ZFYVE16Q7Z3T8 1539 aa11.65□□□□□ -0.55
APH1A-207ENST00000486308 MYOM3Q5VTT5 1437 aa11.64□□□□□ -0.55
APH1A-207ENST00000486308 CAMSAP2Q08AD1 1489 aa11.63□□□□□ -0.55
APH1A-207ENST00000486308 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
APH1A-207ENST00000486308 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
APH1A-207ENST00000486308 HECW2Q9P2P5 1572 aa11.62□□□□□ -0.55
APH1A-207ENST00000486308 MIA2Q96PC5 1412 aa11.62□□□□□ -0.55
APH1A-207ENST00000486308 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
APH1A-207ENST00000486308 DIP2CQ9Y2E4 1556 aa11.6□□□□□ -0.55
APH1A-207ENST00000486308 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
APH1A-207ENST00000486308 ABCA6Q8N139 1617 aa11.6□□□□□ -0.55
APH1A-207ENST00000486308 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
APH1A-207ENST00000486308 INO80Q9ULG1 1556 aaPredicted RBP11.59□□□□□ -0.55
APH1A-207ENST00000486308 ATP10AO60312 1499 aa11.59□□□□□ -0.55
APH1A-207ENST00000486308 SIGLEC1Q9BZZ2 1709 aa11.59□□□□□ -0.55
APH1A-207ENST00000486308 C9orf84Q5VXU9 1444 aa11.59□□□□□ -0.55
APH1A-207ENST00000486308 CCDC141Q6ZP82 1450 aa11.58□□□□□ -0.56
APH1A-207ENST00000486308 FGD6Q6ZV73 1430 aa11.58□□□□□ -0.56
APH1A-207ENST00000486308 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.56
APH1A-207ENST00000486308 SPAG9O60271 1321 aaKnown RBP11.58□□□□□ -0.56
APH1A-207ENST00000486308 ATP7AQ04656 1500 aa11.57□□□□□ -0.56
APH1A-207ENST00000486308 REREQ9P2R6 1566 aa11.57□□□□□ -0.56
APH1A-207ENST00000486308 TCOF1Q13428 1488 aaKnown RBP11.57□□□□□ -0.56
APH1A-207ENST00000486308 PTPN23Q9H3S7 1636 aa11.56□□□□□ -0.56
APH1A-207ENST00000486308 MYT1LQ9UL68 1186 aa11.55□□□□□ -0.56
APH1A-207ENST00000486308 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
APH1A-207ENST00000486308 BCORL1Q5H9F3 1711 aa11.55□□□□□ -0.56
APH1A-207ENST00000486308 RTEL1-TNFRSF6BF6WH68 1400 aa11.54□□□□□ -0.56
APH1A-207ENST00000486308 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
APH1A-207ENST00000486308 ADAMTSL3P82987 1691 aa11.53□□□□□ -0.56
APH1A-207ENST00000486308 PPARGC1BQ86YN6 1023 aaKnown RBP11.53□□□□□ -0.56
APH1A-207ENST00000486308 AGLP35573 1532 aa11.52□□□□□ -0.57
APH1A-207ENST00000486308 PLXNC1O60486 1568 aa11.52□□□□□ -0.57
APH1A-207ENST00000486308 MAST1Q9Y2H9 1570 aa11.52□□□□□ -0.57
APH1A-207ENST00000486308 ABCC5O15440 1437 aa11.51□□□□□ -0.57
APH1A-207ENST00000486308 A2MP01023 1474 aa11.51□□□□□ -0.57
APH1A-207ENST00000486308 SHANK2Q9UPX8 1470 aa11.51□□□□□ -0.57
APH1A-207ENST00000486308 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
APH1A-207ENST00000486308 MADDQ8WXG6 1647 aa11.5□□□□□ -0.57
APH1A-207ENST00000486308 DAPK1P53355 1430 aa11.5□□□□□ -0.57
APH1A-207ENST00000486308 CROCC2H7BZ55 1655 aa11.49□□□□□ -0.57
APH1A-207ENST00000486308 ADGBQ8N7X0 1667 aa11.49□□□□□ -0.57
APH1A-207ENST00000486308 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
APH1A-207ENST00000486308 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
APH1A-207ENST00000486308 MLECQ14165 292 aa11.48□□□□□ -0.57
APH1A-207ENST00000486308 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
APH1A-207ENST00000486308 PTPRMP28827 1452 aa11.47□□□□□ -0.57
APH1A-207ENST00000486308 FAM50AQ14320 339 aaKnown RBP11.47□□□□□ -0.57
APH1A-207ENST00000486308 RIMS1Q86UR5 1692 aaKnown RBP11.46□□□□□ -0.58
APH1A-207ENST00000486308 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
APH1A-207ENST00000486308 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
APH1A-207ENST00000486308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.585e-6■■■■■ 46.2
APH1A-207ENST00000486308 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
APH1A-207ENST00000486308 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
APH1A-207ENST00000486308 KIF15Q9NS87 1388 aa11.43□□□□□ -0.58
APH1A-207ENST00000486308 PHF23Q9BUL5 403 aaPredicted RBP11.43□□□□□ -0.58
APH1A-207ENST00000486308 DUOX2Q9NRD8 1548 aa11.42□□□□□ -0.58
APH1A-207ENST00000486308 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
APH1A-207ENST00000486308 NCOA1Q15788 1441 aa11.42□□□□□ -0.58
APH1A-207ENST00000486308 ANKRD30AQ9BXX3 1397 aa11.41□□□□□ -0.58
APH1A-207ENST00000486308 EIF2AK4Q9P2K8 1649 aaKnown RBP11.41□□□□□ -0.58
APH1A-207ENST00000486308 KIF3BO15066 747 aa11.4□□□□□ -0.58
APH1A-207ENST00000486308 GGT6Q6P531 493 aa11.4□□□□□ -0.58
APH1A-207ENST00000486308 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.58
APH1A-207ENST00000486308 ERBINQ96RT1 1412 aa11.4□□□□□ -0.58
APH1A-207ENST00000486308 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.58
APH1A-207ENST00000486308 RNF17Q9BXT8 1623 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms