RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.49■■■□□ 2.952e-6■■■□□ 19
NECAB3-211ENST00000485399 CCNB3Q8WWL7 1395 aa33.47■■■□□ 2.95
NECAB3-211ENST00000485399 ADAMTSL3P82987 1691 aa33.44■■■□□ 2.94
NECAB3-211ENST00000485399 TTC37Q6PGP7 1564 aa33.43■■■□□ 2.94
NECAB3-211ENST00000485399 MYOM3Q5VTT5 1437 aa33.43■■■□□ 2.94
NECAB3-211ENST00000485399 ITSN2Q9NZM3 1697 aa33.41■■■□□ 2.94
NECAB3-211ENST00000485399 CDC42BPAQ5VT25 1732 aa33.39■■■□□ 2.94
NECAB3-211ENST00000485399 RICTORQ6R327 1708 aa33.39■■■□□ 2.94
NECAB3-211ENST00000485399 GPATCH8Q9UKJ3 1502 aaKnown RBP33.39■■■□□ 2.94
NECAB3-211ENST00000485399 MYO5CQ9NQX4 1742 aa33.38■■■□□ 2.93
NECAB3-211ENST00000485399 CFAP74Q9C0B2 1584 aa33.36■■■□□ 2.93
NECAB3-211ENST00000485399 FANCAO15360 1455 aa33.35■■■□□ 2.93
NECAB3-211ENST00000485399 BCORL1Q5H9F3 1711 aa33.35■■■□□ 2.93
NECAB3-211ENST00000485399 AKNAQ7Z591 1439 aa33.34■■■□□ 2.93
NECAB3-211ENST00000485399 PREX2Q70Z35 1606 aa33.34■■■□□ 2.93
NECAB3-211ENST00000485399 ARHGEF40Q8TER5 1519 aa33.34■■■□□ 2.93
NECAB3-211ENST00000485399 DENND4BO75064 1496 aaPredicted RBP33.34■■■□□ 2.93
NECAB3-211ENST00000485399 MIA2Q96PC5 1412 aa33.34■■■□□ 2.93
NECAB3-211ENST00000485399 PTPRMP28827 1452 aa33.33■■■□□ 2.93
NECAB3-211ENST00000485399 FGD6Q6ZV73 1430 aa33.33■■■□□ 2.93
NECAB3-211ENST00000485399 ILDR1Q86SU0 546 aaPredicted RBP33.33■■■□□ 2.93
NECAB3-211ENST00000485399 PLCH2O75038 1416 aa33.31■■■□□ 2.92
NECAB3-211ENST00000485399 CFDP1Q9UEE9 299 aaPredicted RBP33.31■■■□□ 2.92
NECAB3-211ENST00000485399 RRBP1Q9P2E9 1410 aaKnown RBP33.3■■■□□ 2.92
NECAB3-211ENST00000485399 CDC42BPBQ9Y5S2 1711 aa33.3■■■□□ 2.92
NECAB3-211ENST00000485399 MADDQ8WXG6 1647 aa33.27■■■□□ 2.92
NECAB3-211ENST00000485399 ZMYM4Q5VZL5 1548 aa33.26■■■□□ 2.91
NECAB3-211ENST00000485399 ARHGAP5Q13017 1502 aa33.25■■■□□ 2.91
NECAB3-211ENST00000485399 TRIM26Q12899 539 aaPredicted RBP33.24■■■□□ 2.91
NECAB3-211ENST00000485399 PTPN23Q9H3S7 1636 aa33.24■■■□□ 2.91
NECAB3-211ENST00000485399 EFCAB2Q5VUJ9 269 aa33.21■■■□□ 2.91
NECAB3-211ENST00000485399 TCOF1Q13428 1488 aaKnown RBP33.2■■■□□ 2.91
NECAB3-211ENST00000485399 SIGLEC1Q9BZZ2 1709 aa33.19■■■□□ 2.9
NECAB3-211ENST00000485399 ARID4BQ4LE39 1312 aaPredicted RBP33.18■■■□□ 2.9
NECAB3-211ENST00000485399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.18■■■□□ 2.95e-7■■■■■ 29.7
NECAB3-211ENST00000485399 ZNF777Q9ULD5 760 aaPredicted RBP33.18■■■□□ 2.9
NECAB3-211ENST00000485399 FAM50AQ14320 339 aaKnown RBP33.17■■■□□ 2.9
NECAB3-211ENST00000485399 YEATS2Q9ULM3 1422 aa33.15■■■□□ 2.9
NECAB3-211ENST00000485399 ZFYVE16Q7Z3T8 1539 aa33.15■■■□□ 2.9
NECAB3-211ENST00000485399 CAMSAP2Q08AD1 1489 aa33.14■■■□□ 2.9
NECAB3-211ENST00000485399 SAMD9LQ8IVG5 1584 aa33.13■■■□□ 2.89
NECAB3-211ENST00000485399 RIMS1Q86UR5 1692 aaKnown RBP33.12■■■□□ 2.89
NECAB3-211ENST00000485399 ZNF644Q9H582 1327 aaPredicted RBP33.12■■■□□ 2.89
NECAB3-211ENST00000485399 MAGI2Q86UL8 1455 aa33.12■■■□□ 2.89
NECAB3-211ENST00000485399 POGZQ7Z3K3 1410 aa33.11■■■□□ 2.89
NECAB3-211ENST00000485399 PLEKHH2Q8IVE3 1493 aa33.1■■■□□ 2.89
NECAB3-211ENST00000485399 SCAPERQ9BY12 1400 aa33.1■■■□□ 2.89
NECAB3-211ENST00000485399 LMTK3Q96Q04 1460 aa33.05■■■□□ 2.88
NECAB3-211ENST00000485399 KIAA1107Q9UPP5 1409 aa33.05■■■□□ 2.88
NECAB3-211ENST00000485399 ABCC1P33527 1531 aa33.02■■■□□ 2.88
NECAB3-211ENST00000485399 RSPH4AQ5TD94 716 aa32.99■■■□□ 2.87
NECAB3-211ENST00000485399 SYCP2Q9BX26 1530 aa32.99■■■□□ 2.87
NECAB3-211ENST00000485399 ARHGEF5Q12774 1597 aa32.98■■■□□ 2.87
NECAB3-211ENST00000485399 HNRNPMP52272 730 aaKnown RBP eCLIP32.98■■■□□ 2.875e-11■■■□□ 16.7
NECAB3-211ENST00000485399 DNMT1P26358 1616 aaKnown RBP32.98■■■□□ 2.87
NECAB3-211ENST00000485399 MBD5Q9P267 1494 aa32.97■■■□□ 2.87
NECAB3-211ENST00000485399 ITGAEP38570 1179 aa32.95■■■□□ 2.86
NECAB3-211ENST00000485399 FER1L4A9Z1Z3 1794 aa32.94■■■□□ 2.86
NECAB3-211ENST00000485399 DAPK1P53355 1430 aa32.94■■■□□ 2.86
NECAB3-211ENST00000485399 ATP10AO60312 1499 aa32.94■■■□□ 2.86
NECAB3-211ENST00000485399 ARHGEF12Q9NZN5 1544 aa32.93■■■□□ 2.86
NECAB3-211ENST00000485399 KDM5CP41229 1560 aa32.92■■■□□ 2.86
NECAB3-211ENST00000485399 ABCC5O15440 1437 aa32.92■■■□□ 2.86
NECAB3-211ENST00000485399 PCGF6Q9BYE7 350 aa32.92■■■□□ 2.86
NECAB3-211ENST00000485399 ZNF518AQ6AHZ1 1483 aa32.91■■■□□ 2.86
NECAB3-211ENST00000485399 CCDC141Q6ZP82 1450 aa32.91■■■□□ 2.86
NECAB3-211ENST00000485399 C9orf84Q5VXU9 1444 aa32.9■■■□□ 2.86
NECAB3-211ENST00000485399 CROCC2H7BZ55 1655 aa32.88■■■□□ 2.85
NECAB3-211ENST00000485399 MLECQ14165 292 aa32.87■■■□□ 2.85
NECAB3-211ENST00000485399 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
NECAB3-211ENST00000485399 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
NECAB3-211ENST00000485399 TRAPPC8Q9Y2L5 1435 aa32.85■■■□□ 2.85
NECAB3-211ENST00000485399 SHANK2Q9UPX8 1470 aa32.84■■■□□ 2.85
NECAB3-211ENST00000485399 PTPRKQ15262 1439 aa32.84■■■□□ 2.85
NECAB3-211ENST00000485399 AFAP1Q8N556 730 aa32.83■■■□□ 2.85
NECAB3-211ENST00000485399 PLPPR3Q6T4P5 718 aa32.81■■■□□ 2.84
NECAB3-211ENST00000485399 DIP2CQ9Y2E4 1556 aa32.8■■■□□ 2.84
NECAB3-211ENST00000485399 HSPA2P54652 639 aa32.79■■■□□ 2.84
NECAB3-211ENST00000485399 MAST1Q9Y2H9 1570 aa32.78■■■□□ 2.84
NECAB3-211ENST00000485399 CHIC2Q9UKJ5 165 aa32.78■■■□□ 2.84
NECAB3-211ENST00000485399 REREQ9P2R6 1566 aa32.77■■■□□ 2.84
NECAB3-211ENST00000485399 ADGBQ8N7X0 1667 aa32.76■■■□□ 2.84
NECAB3-211ENST00000485399 ABCA6Q8N139 1617 aa32.76■■■□□ 2.84
NECAB3-211ENST00000485399 FBXO41Q8TF61 875 aa32.76■■■□□ 2.83
NECAB3-211ENST00000485399 MLH3Q9UHC1 1453 aa32.75■■■□□ 2.83
NECAB3-211ENST00000485399 SPAG9O60271 1321 aaKnown RBP32.75■■■□□ 2.83
NECAB3-211ENST00000485399 ROCK1Q13464 1354 aa32.74■■■□□ 2.83
NECAB3-211ENST00000485399 ADGRL2O95490 1459 aa32.73■■■□□ 2.83
NECAB3-211ENST00000485399 RTEL1-TNFRSF6BF6WH68 1400 aa32.72■■■□□ 2.83
NECAB3-211ENST00000485399 ANKRD30AQ9BXX3 1397 aa32.71■■■□□ 2.83
NECAB3-211ENST00000485399 PREX1Q8TCU6 1659 aa32.69■■■□□ 2.82
NECAB3-211ENST00000485399 NCOA1Q15788 1441 aa32.68■■■□□ 2.82
NECAB3-211ENST00000485399 INO80Q9ULG1 1556 aaPredicted RBP32.68■■■□□ 2.82
NECAB3-211ENST00000485399 ATP7AQ04656 1500 aa32.66■■■□□ 2.82
NECAB3-211ENST00000485399 MYT1LQ9UL68 1186 aa32.66■■■□□ 2.82
NECAB3-211ENST00000485399 KIDINS220Q9ULH0 1771 aa32.66■■■□□ 2.82
NECAB3-211ENST00000485399 PLXNC1O60486 1568 aa32.65■■■□□ 2.82
NECAB3-211ENST00000485399 CEBPAP49715 358 aaPredicted RBP32.64■■■□□ 2.82
NECAB3-211ENST00000485399 RRP7BPQ9NSQ0 103 aa32.64■■■□□ 2.82
NECAB3-211ENST00000485399 HFM1A2PYH4 1435 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms