RNA–Protein interactions for RNA: ENST00000485112.1

CLASP1-213, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5

Gene CLASP1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-213ENST00000485112 GPATCH8Q9UKJ3 1502 aaKnown RBP35.7■■■■□ 3.31
CLASP1-213ENST00000485112 PREX2Q70Z35 1606 aa35.69■■■■□ 3.3
CLASP1-213ENST00000485112 DENND4BO75064 1496 aaPredicted RBP35.68■■■■□ 3.3
CLASP1-213ENST00000485112 KANK4Q5T7N3 995 aaPredicted RBP35.68■■■■□ 3.3
CLASP1-213ENST00000485112 ADGRL1O94910 1474 aa35.67■■■■□ 3.3
CLASP1-213ENST00000485112 SUPT6HQ7KZ85 1726 aaKnown RBP35.66■■■■□ 3.3
CLASP1-213ENST00000485112 NCOA2Q15596 1464 aa35.65■■■■□ 3.3
CLASP1-213ENST00000485112 RAPGEF3O95398 923 aa35.64■■■■□ 3.3
CLASP1-213ENST00000485112 CFDP1Q9UEE9 299 aaPredicted RBP35.64■■■■□ 3.3
CLASP1-213ENST00000485112 SCAPERQ9BY12 1400 aa35.64■■■■□ 3.3
CLASP1-213ENST00000485112 CDC42BPBQ9Y5S2 1711 aa35.63■■■■□ 3.29
CLASP1-213ENST00000485112 CDC42BPAQ5VT25 1732 aa35.63■■■■□ 3.29
CLASP1-213ENST00000485112 ZNF777Q9ULD5 760 aaPredicted RBP35.56■■■■□ 3.28
CLASP1-213ENST00000485112 ITSN2Q9NZM3 1697 aa35.54■■■■□ 3.28
CLASP1-213ENST00000485112 POGZQ7Z3K3 1410 aa35.54■■■■□ 3.28
CLASP1-213ENST00000485112 FRMPD1Q5SYB0 1578 aa35.51■■■■□ 3.28
CLASP1-213ENST00000485112 PLEKHH2Q8IVE3 1493 aa35.51■■■■□ 3.28
CLASP1-213ENST00000485112 ABCC1P33527 1531 aa35.5■■■■□ 3.27
CLASP1-213ENST00000485112 RICTORQ6R327 1708 aa35.49■■■■□ 3.27
CLASP1-213ENST00000485112 ZNF518AQ6AHZ1 1483 aa35.48■■■■□ 3.27
CLASP1-213ENST00000485112 KIAA1107Q9UPP5 1409 aa35.47■■■■□ 3.27
CLASP1-213ENST00000485112 SAMD9LQ8IVG5 1584 aa35.46■■■■□ 3.27
CLASP1-213ENST00000485112 ZMYM4Q5VZL5 1548 aa35.45■■■■□ 3.27
CLASP1-213ENST00000485112 MAGI2Q86UL8 1455 aa35.44■■■■□ 3.26
CLASP1-213ENST00000485112 ARHGEF12Q9NZN5 1544 aa35.42■■■■□ 3.26
CLASP1-213ENST00000485112 MYOM3Q5VTT5 1437 aa35.41■■■■□ 3.26
CLASP1-213ENST00000485112 AFAP1Q8N556 730 aa35.41■■■■□ 3.26
CLASP1-213ENST00000485112 MIA2Q96PC5 1412 aa35.39■■■■□ 3.26
CLASP1-213ENST00000485112 TRAPPC8Q9Y2L5 1435 aa35.39■■■■□ 3.26
CLASP1-213ENST00000485112 HNRNPMP52272 730 aaKnown RBP eCLIP35.38■■■■□ 3.25
CLASP1-213ENST00000485112 SYCP2Q9BX26 1530 aa35.37■■■■□ 3.25
CLASP1-213ENST00000485112 ZNF644Q9H582 1327 aaPredicted RBP35.37■■■■□ 3.25
CLASP1-213ENST00000485112 KDM5CP41229 1560 aa35.36■■■■□ 3.25
CLASP1-213ENST00000485112 ZFYVE16Q7Z3T8 1539 aa35.33■■■■□ 3.25
CLASP1-213ENST00000485112 CAMSAP2Q08AD1 1489 aa35.31■■■■□ 3.24
CLASP1-213ENST00000485112 RSPH4AQ5TD94 716 aa35.31■■■■□ 3.24
CLASP1-213ENST00000485112 MYT1LQ9UL68 1186 aa35.31■■■■□ 3.24
CLASP1-213ENST00000485112 ARHGEF40Q8TER5 1519 aa35.31■■■■□ 3.24
CLASP1-213ENST00000485112 MLH3Q9UHC1 1453 aa35.3■■■■□ 3.24
CLASP1-213ENST00000485112 YEATS2Q9ULM3 1422 aa35.28■■■■□ 3.24
CLASP1-213ENST00000485112 MBD5Q9P267 1494 aa35.28■■■■□ 3.24
CLASP1-213ENST00000485112 SPAG9O60271 1321 aaKnown RBP35.26■■■■□ 3.23
CLASP1-213ENST00000485112 HECW2Q9P2P5 1572 aa35.25■■■■□ 3.23
CLASP1-213ENST00000485112 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
CLASP1-213ENST00000485112 ATP10AO60312 1499 aa35.21■■■■□ 3.23
CLASP1-213ENST00000485112 CCDC141Q6ZP82 1450 aa35.2■■■■□ 3.23
CLASP1-213ENST00000485112 C9orf84Q5VXU9 1444 aa35.17■■■■□ 3.22
CLASP1-213ENST00000485112 ARHGEF5Q12774 1597 aa35.17■■■■□ 3.22
CLASP1-213ENST00000485112 ARID4BQ4LE39 1312 aaPredicted RBP35.16■■■■□ 3.22
CLASP1-213ENST00000485112 TSPY4P0CV99 314 aa35.14■■■■□ 3.22
CLASP1-213ENST00000485112 TSPY10P0CW01 314 aa35.14■■■■□ 3.22
CLASP1-213ENST00000485112 PPARGC1BQ86YN6 1023 aaKnown RBP35.14■■■■□ 3.22
CLASP1-213ENST00000485112 PTPN23Q9H3S7 1636 aa35.14■■■■□ 3.22
CLASP1-213ENST00000485112 RTEL1-TNFRSF6BF6WH68 1400 aa35.13■■■■□ 3.21
CLASP1-213ENST00000485112 TCOF1Q13428 1488 aaKnown RBP35.12■■■■□ 3.21
CLASP1-213ENST00000485112 ATP7AQ04656 1500 aa35.11■■■■□ 3.21
CLASP1-213ENST00000485112 KIDINS220Q9ULH0 1771 aa35.11■■■■□ 3.21
CLASP1-213ENST00000485112 DIP2CQ9Y2E4 1556 aa35.11■■■■□ 3.21
CLASP1-213ENST00000485112 INO80Q9ULG1 1556 aaPredicted RBP35.09■■■■□ 3.21
CLASP1-213ENST00000485112 KDM4FA0A1W2PPD8 638 aa35.09■■■■□ 3.21
CLASP1-213ENST00000485112 ABCA6Q8N139 1617 aa35.07■■■■□ 3.21
CLASP1-213ENST00000485112 REREQ9P2R6 1566 aa35.07■■■■□ 3.2
CLASP1-213ENST00000485112 FAM50AQ14320 339 aaKnown RBP35.01■■■■□ 3.2
CLASP1-213ENST00000485112 ABCC5O15440 1437 aa34.98■■■■□ 3.19
CLASP1-213ENST00000485112 AGLP35573 1532 aa34.97■■■■□ 3.19
CLASP1-213ENST00000485112 MAST1Q9Y2H9 1570 aa34.97■■■■□ 3.19
CLASP1-213ENST00000485112 A2MP01023 1474 aa34.97■■■■□ 3.19
CLASP1-213ENST00000485112 AEBP2Q6ZN18 517 aaPredicted RBP34.96■■■■□ 3.19
CLASP1-213ENST00000485112 DAPK1P53355 1430 aa34.96■■■■□ 3.19
CLASP1-213ENST00000485112 SHANK2Q9UPX8 1470 aa34.95■■■■□ 3.19
CLASP1-213ENST00000485112 BCORL1Q5H9F3 1711 aa34.95■■■■□ 3.18
CLASP1-213ENST00000485112 DNMT1P26358 1616 aaKnown RBP34.93■■■■□ 3.18
CLASP1-213ENST00000485112 SIGLEC1Q9BZZ2 1709 aa34.92■■■■□ 3.18
CLASP1-213ENST00000485112 MLECQ14165 292 aa34.91■■■■□ 3.18
CLASP1-213ENST00000485112 DHX29Q7Z478 1369 aaKnown RBP34.9■■■■□ 3.18
CLASP1-213ENST00000485112 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.9■■■■□ 3.18
CLASP1-213ENST00000485112 ADGBQ8N7X0 1667 aa34.9■■■■□ 3.18
CLASP1-213ENST00000485112 ADAMTSL3P82987 1691 aa34.89■■■■□ 3.18
CLASP1-213ENST00000485112 PLXNC1O60486 1568 aa34.87■■■■□ 3.17
CLASP1-213ENST00000485112 CROCC2H7BZ55 1655 aa34.84■■■■□ 3.17
CLASP1-213ENST00000485112 RRBP1Q9P2E9 1410 aaKnown RBP34.83■■■■□ 3.17
CLASP1-213ENST00000485112 ANKRD30AQ9BXX3 1397 aa34.8■■■■□ 3.16
CLASP1-213ENST00000485112 CHIC2Q9UKJ5 165 aa34.78■■■■□ 3.16
CLASP1-213ENST00000485112 MADDQ8WXG6 1647 aa34.77■■■■□ 3.16
CLASP1-213ENST00000485112 KIF15Q9NS87 1388 aa34.76■■■■□ 3.16
CLASP1-213ENST00000485112 ESF1Q9H501 851 aaKnown RBP34.76■■■■□ 3.16
CLASP1-213ENST00000485112 RRP7BPQ9NSQ0 103 aa34.75■■■■□ 3.15
CLASP1-213ENST00000485112 PPP6R1Q9UPN7 881 aa34.74■■■■□ 3.15
CLASP1-213ENST00000485112 DUOX2Q9NRD8 1548 aa34.74■■■■□ 3.15
CLASP1-213ENST00000485112 ADGRL2O95490 1459 aa34.73■■■■□ 3.15
CLASP1-213ENST00000485112 PTPRMP28827 1452 aa34.73■■■■□ 3.15
CLASP1-213ENST00000485112 KIF3BO15066 747 aa34.73■■■■□ 3.15
CLASP1-213ENST00000485112 NCOA1Q15788 1441 aa34.72■■■■□ 3.15
CLASP1-213ENST00000485112 GGT6Q6P531 493 aa34.71■■■■□ 3.15
CLASP1-213ENST00000485112 FER1L4A9Z1Z3 1794 aa34.68■■■■□ 3.14
CLASP1-213ENST00000485112 CNTLNQ9NXG0 1405 aa34.67■■■■□ 3.14
CLASP1-213ENST00000485112 RIMS1Q86UR5 1692 aaKnown RBP34.66■■■■□ 3.14
CLASP1-213ENST00000485112 PTPRKQ15262 1439 aa34.66■■■■□ 3.14
CLASP1-213ENST00000485112 ERBINQ96RT1 1412 aa34.66■■■■□ 3.14
CLASP1-213ENST00000485112 ITGAEP38570 1179 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms