RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 MYO5CQ9NQX4 1742 aa26.39■■□□□ 1.81
CCDC78-214ENST00000485091 PREX2Q70Z35 1606 aa26.38■■□□□ 1.81
CCDC78-214ENST00000485091 CDC42BPBQ9Y5S2 1711 aa26.37■■□□□ 1.81
CCDC78-214ENST00000485091 ARHGAP5Q13017 1502 aa26.37■■□□□ 1.81
CCDC78-214ENST00000485091 CAMSAP2Q08AD1 1489 aa26.36■■□□□ 1.81
CCDC78-214ENST00000485091 ABCA9Q8IUA7 1624 aa26.35■■□□□ 1.81
CCDC78-214ENST00000485091 PLCH2O75038 1416 aa26.34■■□□□ 1.81
CCDC78-214ENST00000485091 EFCAB2Q5VUJ9 269 aa26.29■■□□□ 1.8
CCDC78-214ENST00000485091 SAMD9LQ8IVG5 1584 aa26.27■■□□□ 1.8
CCDC78-214ENST00000485091 FAM69CQ0P6D2 419 aa26.27■■□□□ 1.8
CCDC78-214ENST00000485091 PTPRKQ15262 1439 aa26.27■■□□□ 1.8
CCDC78-214ENST00000485091 CD109Q6YHK3 1445 aa26.27■■□□□ 1.8
CCDC78-214ENST00000485091 HNRNPMP52272 730 aaKnown RBP eCLIP26.26■■□□□ 1.79
CCDC78-214ENST00000485091 CHIC2Q9UKJ5 165 aa26.26■■□□□ 1.79
CCDC78-214ENST00000485091 DAPK1P53355 1430 aa26.23■■□□□ 1.79
CCDC78-214ENST00000485091 ABCC5O15440 1437 aa26.22■■□□□ 1.79
CCDC78-214ENST00000485091 DIP2BQ9P265 1576 aa26.22■■□□□ 1.79
CCDC78-214ENST00000485091 FANCAO15360 1455 aa26.21■■□□□ 1.79
CCDC78-214ENST00000485091 DNMT1P26358 1616 aaKnown RBP26.21■■□□□ 1.79
CCDC78-214ENST00000485091 ARAP3Q8WWN8 1544 aa26.21■■□□□ 1.79
CCDC78-214ENST00000485091 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
CCDC78-214ENST00000485091 GLI2P10070 1586 aa26.19■■□□□ 1.78
CCDC78-214ENST00000485091 SYCP2Q9BX26 1530 aa26.18■■□□□ 1.78
CCDC78-214ENST00000485091 PLEKHH2Q8IVE3 1493 aa26.16■■□□□ 1.78
CCDC78-214ENST00000485091 MBD5Q9P267 1494 aa26.16■■□□□ 1.78
CCDC78-214ENST00000485091 MAP3K4Q9Y6R4 1608 aa26.16■■□□□ 1.78
CCDC78-214ENST00000485091 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
CCDC78-214ENST00000485091 ARHGEF12Q9NZN5 1544 aa26.14■■□□□ 1.78
CCDC78-214ENST00000485091 ABCC1P33527 1531 aa26.13■■□□□ 1.77
CCDC78-214ENST00000485091 KIAA1107Q9UPP5 1409 aa26.12■■□□□ 1.77
CCDC78-214ENST00000485091 TSPY4P0CV99 314 aa26.12■■□□□ 1.77
CCDC78-214ENST00000485091 TSPY10P0CW01 314 aa26.12■■□□□ 1.77
CCDC78-214ENST00000485091 ARHGEF5Q12774 1597 aa26.12■■□□□ 1.77
CCDC78-214ENST00000485091 AKNAQ7Z591 1439 aa26.12■■□□□ 1.77
CCDC78-214ENST00000485091 CCDC141Q6ZP82 1450 aa26.11■■□□□ 1.77
CCDC78-214ENST00000485091 CROCC2H7BZ55 1655 aa26.1■■□□□ 1.77
CCDC78-214ENST00000485091 ADGRL1O94910 1474 aa26.1■■□□□ 1.77
CCDC78-214ENST00000485091 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
CCDC78-214ENST00000485091 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
CCDC78-214ENST00000485091 TSPOAP1O95153 1857 aa26.08■■□□□ 1.77
CCDC78-214ENST00000485091 SCAPERQ9BY12 1400 aa26.08■■□□□ 1.76
CCDC78-214ENST00000485091 TRAPPC8Q9Y2L5 1435 aa26.08■■□□□ 1.76
CCDC78-214ENST00000485091 CFAP74Q9C0B2 1584 aa26.07■■□□□ 1.76
CCDC78-214ENST00000485091 C9orf84Q5VXU9 1444 aa26.07■■□□□ 1.76
CCDC78-214ENST00000485091 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
CCDC78-214ENST00000485091 HFM1A2PYH4 1435 aa26.05■■□□□ 1.76
CCDC78-214ENST00000485091 AFAP1Q8N556 730 aa26.05■■□□□ 1.76
CCDC78-214ENST00000485091 NAIPQ13075 1403 aa26.04■■□□□ 1.76
CCDC78-214ENST00000485091 ROCK1Q13464 1354 aa26.03■■□□□ 1.76
CCDC78-214ENST00000485091 SHANK2Q9UPX8 1470 aa26.03■■□□□ 1.76
CCDC78-214ENST00000485091 ADGBQ8N7X0 1667 aa26.02■■□□□ 1.76
CCDC78-214ENST00000485091 NEO1Q92859 1461 aa26.02■■□□□ 1.76
CCDC78-214ENST00000485091 ANKRD30AQ9BXX3 1397 aa26.01■■□□□ 1.75
CCDC78-214ENST00000485091 NCOA1Q15788 1441 aa26■■□□□ 1.75
CCDC78-214ENST00000485091 ADGRL2O95490 1459 aa25.99■■□□□ 1.75
CCDC78-214ENST00000485091 PPRC1Q5VV67 1664 aaKnown RBP25.99■■□□□ 1.75
CCDC78-214ENST00000485091 MYT1LQ9UL68 1186 aa25.98■■□□□ 1.75
CCDC78-214ENST00000485091 SPAG9O60271 1321 aaKnown RBP25.97■■□□□ 1.75
CCDC78-214ENST00000485091 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
CCDC78-214ENST00000485091 GCC2Q8IWJ2 1684 aa25.97■■□□□ 1.75
CCDC78-214ENST00000485091 TEX14Q8IWB6 1497 aa25.95■■□□□ 1.75
CCDC78-214ENST00000485091 MAST1Q9Y2H9 1570 aa25.94■■□□□ 1.74
CCDC78-214ENST00000485091 RAPGEF3O95398 923 aa25.93■■□□□ 1.74
CCDC78-214ENST00000485091 KDM6BO15054 1643 aa25.92■■□□□ 1.74
CCDC78-214ENST00000485091 KIF15Q9NS87 1388 aa25.92■■□□□ 1.74
CCDC78-214ENST00000485091 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
CCDC78-214ENST00000485091 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
CCDC78-214ENST00000485091 POGZQ7Z3K3 1410 aa25.91■■□□□ 1.74
CCDC78-214ENST00000485091 HRCP23327 699 aa25.88■■□□□ 1.73
CCDC78-214ENST00000485091 ZFYVE16Q7Z3T8 1539 aa25.87■■□□□ 1.73
CCDC78-214ENST00000485091 RTEL1-TNFRSF6BF6WH68 1400 aa25.86■■□□□ 1.73
CCDC78-214ENST00000485091 TRIM52Q96A61 297 aa25.85■■□□□ 1.73
CCDC78-214ENST00000485091 ANKRD50Q9ULJ7 1429 aa25.85■■□□□ 1.73
CCDC78-214ENST00000485091 ATP7AQ04656 1500 aa25.85■■□□□ 1.73
CCDC78-214ENST00000485091 PLXNC1O60486 1568 aa25.84■■□□□ 1.73
CCDC78-214ENST00000485091 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.73
CCDC78-214ENST00000485091 INO80Q9ULG1 1556 aaPredicted RBP25.83■■□□□ 1.73
CCDC78-214ENST00000485091 KDM5CP41229 1560 aa25.82■■□□□ 1.72
CCDC78-214ENST00000485091 RICTORQ6R327 1708 aa25.81■■□□□ 1.72
CCDC78-214ENST00000485091 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
CCDC78-214ENST00000485091 HECW2Q9P2P5 1572 aa25.78■■□□□ 1.72
CCDC78-214ENST00000485091 FRMPD1Q5SYB0 1578 aa25.78■■□□□ 1.72
CCDC78-214ENST00000485091 DUOX2Q9NRD8 1548 aa25.78■■□□□ 1.72
CCDC78-214ENST00000485091 MLH3Q9UHC1 1453 aa25.77■■□□□ 1.72
CCDC78-214ENST00000485091 COL17A1Q9UMD9 1497 aaPredicted RBP25.75■■□□□ 1.71
CCDC78-214ENST00000485091 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
CCDC78-214ENST00000485091 YEATS2Q9ULM3 1422 aa25.69■■□□□ 1.7
CCDC78-214ENST00000485091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.7
CCDC78-214ENST00000485091 DHX29Q7Z478 1369 aaKnown RBP25.69■■□□□ 1.7
CCDC78-214ENST00000485091 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
CCDC78-214ENST00000485091 ACIN1Q9UKV3 1341 aaKnown RBP25.68■■□□□ 1.7
CCDC78-214ENST00000485091 MPHOSPH9Q99550 1183 aa25.68■■□□□ 1.7
CCDC78-214ENST00000485091 ZMYM4Q5VZL5 1548 aa25.67■■□□□ 1.7
CCDC78-214ENST00000485091 NUP155O75694 1391 aa25.67■■□□□ 1.7
CCDC78-214ENST00000485091 A2MP01023 1474 aa25.67■■□□□ 1.7
CCDC78-214ENST00000485091 KIF3BO15066 747 aa25.65■■□□□ 1.7
CCDC78-214ENST00000485091 SLC4A1APQ9BWU0 796 aaKnown RBP25.65■■□□□ 1.7
CCDC78-214ENST00000485091 DIP2CQ9Y2E4 1556 aa25.65■■□□□ 1.7
CCDC78-214ENST00000485091 MAGI2Q86UL8 1455 aa25.61■■□□□ 1.69
CCDC78-214ENST00000485091 PZPP20742 1482 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms