RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 HNRNPMP52272 730 aaKnown RBP eCLIP8.19□□□□□ -1.1
CNTN4-216ENST00000484686 MAP3K1Q13233 1512 aa8.19□□□□□ -1.1
CNTN4-216ENST00000484686 DIP2BQ9P265 1576 aa8.18□□□□□ -1.1
CNTN4-216ENST00000484686 RAPGEF3O95398 923 aa8.18□□□□□ -1.1
CNTN4-216ENST00000484686 GPATCH8Q9UKJ3 1502 aaKnown RBP8.18□□□□□ -1.1
CNTN4-216ENST00000484686 EFCAB2Q5VUJ9 269 aa8.18□□□□□ -1.1
CNTN4-216ENST00000484686 MYT1LQ9UL68 1186 aa8.18□□□□□ -1.1
CNTN4-216ENST00000484686 SUPT6HQ7KZ85 1726 aaKnown RBP8.17□□□□□ -1.1
CNTN4-216ENST00000484686 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 CHIC2Q9UKJ5 165 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 ARHGAP5Q13017 1502 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 PLPPR3Q6T4P5 718 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 PLCH2O75038 1416 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 FANCAO15360 1455 aa8.16□□□□□ -1.1
CNTN4-216ENST00000484686 KIF13AQ9H1H9 1805 aa8.15□□□□□ -1.1
CNTN4-216ENST00000484686 MYOM3Q5VTT5 1437 aa8.15□□□□□ -1.1
CNTN4-216ENST00000484686 ABCA9Q8IUA7 1624 aa8.14□□□□□ -1.11
CNTN4-216ENST00000484686 FGD6Q6ZV73 1430 aa8.13□□□□□ -1.11
CNTN4-216ENST00000484686 PCGF6Q9BYE7 350 aa8.13□□□□□ -1.11
CNTN4-216ENST00000484686 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
CNTN4-216ENST00000484686 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
CNTN4-216ENST00000484686 CDC42BPAQ5VT25 1732 aa8.12□□□□□ -1.11
CNTN4-216ENST00000484686 AKNAQ7Z591 1439 aa8.12□□□□□ -1.11
CNTN4-216ENST00000484686 CDC42BPBQ9Y5S2 1711 aa8.12□□□□□ -1.11
CNTN4-216ENST00000484686 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
CNTN4-216ENST00000484686 GLI2P10070 1586 aa8.11□□□□□ -1.11
CNTN4-216ENST00000484686 MYO5CQ9NQX4 1742 aa8.11□□□□□ -1.11
CNTN4-216ENST00000484686 ADGRL1O94910 1474 aa8.11□□□□□ -1.11
CNTN4-216ENST00000484686 COL17A1Q9UMD9 1497 aaPredicted RBP8.11□□□□□ -1.11
CNTN4-216ENST00000484686 TRAPPC8Q9Y2L5 1435 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 TSPY4P0CV99 314 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 TSPY10P0CW01 314 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 ARHGEF12Q9NZN5 1544 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 CAMSAP2Q08AD1 1489 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 RRP7BPQ9NSQ0 103 aa8.1□□□□□ -1.11
CNTN4-216ENST00000484686 PREX2Q70Z35 1606 aa8.09□□□□□ -1.11
CNTN4-216ENST00000484686 TRIM26Q12899 539 aaPredicted RBP8.09□□□□□ -1.11
CNTN4-216ENST00000484686 MIA2Q96PC5 1412 aa8.09□□□□□ -1.11
CNTN4-216ENST00000484686 SYCP2Q9BX26 1530 aa8.09□□□□□ -1.11
CNTN4-216ENST00000484686 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
CNTN4-216ENST00000484686 TEX14Q8IWB6 1497 aa8.09□□□□□ -1.12
CNTN4-216ENST00000484686 PPRC1Q5VV67 1664 aaKnown RBP8.08□□□□□ -1.12
CNTN4-216ENST00000484686 PTPN23Q9H3S7 1636 aa8.08□□□□□ -1.12
CNTN4-216ENST00000484686 SPAG9O60271 1321 aaKnown RBP8.08□□□□□ -1.12
CNTN4-216ENST00000484686 ITSN2Q9NZM3 1697 aa8.07□□□□□ -1.12
CNTN4-216ENST00000484686 PTPRKQ15262 1439 aa8.07□□□□□ -1.12
CNTN4-216ENST00000484686 RRBP1Q9P2E9 1410 aaKnown RBP8.07□□□□□ -1.12
CNTN4-216ENST00000484686 DENND4BO75064 1496 aaPredicted RBP8.06□□□□□ -1.12
CNTN4-216ENST00000484686 NEO1Q92859 1461 aa8.06□□□□□ -1.12
CNTN4-216ENST00000484686 MBD5Q9P267 1494 aa8.06□□□□□ -1.12
CNTN4-216ENST00000484686 ABCC5O15440 1437 aa8.06□□□□□ -1.12
CNTN4-216ENST00000484686 DAPK1P53355 1430 aa8.05□□□□□ -1.12
CNTN4-216ENST00000484686 ABCC1P33527 1531 aa8.05□□□□□ -1.12
CNTN4-216ENST00000484686 MLECQ14165 292 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 DAXXQ9UER7 740 aaPredicted RBP8.04□□□□□ -1.12
CNTN4-216ENST00000484686 KIAA1107Q9UPP5 1409 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 ARID4BQ4LE39 1312 aaPredicted RBP8.04□□□□□ -1.12
CNTN4-216ENST00000484686 POGZQ7Z3K3 1410 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 ARAP3Q8WWN8 1544 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 KDM6BO15054 1643 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 ZNF518AQ6AHZ1 1483 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 YEATS2Q9ULM3 1422 aa8.04□□□□□ -1.12
CNTN4-216ENST00000484686 TCOF1Q13428 1488 aaKnown RBP8.03□□□□□ -1.12
CNTN4-216ENST00000484686 CCDC141Q6ZP82 1450 aa8.03□□□□□ -1.12
CNTN4-216ENST00000484686 PLEKHH2Q8IVE3 1493 aa8.03□□□□□ -1.12
CNTN4-216ENST00000484686 C9orf84Q5VXU9 1444 aa8.03□□□□□ -1.12
CNTN4-216ENST00000484686 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.02□□□□□ -1.13
CNTN4-216ENST00000484686 GGT6Q6P531 493 aa8.01□□□□□ -1.13
CNTN4-216ENST00000484686 CFAP74Q9C0B2 1584 aa8.01□□□□□ -1.13
CNTN4-216ENST00000484686 KIF3BO15066 747 aa8.01□□□□□ -1.13
CNTN4-216ENST00000484686 KIF15Q9NS87 1388 aa8□□□□□ -1.13
CNTN4-216ENST00000484686 ANKRD30AQ9BXX3 1397 aa8□□□□□ -1.13
CNTN4-216ENST00000484686 NCOA1Q15788 1441 aa8□□□□□ -1.13
CNTN4-216ENST00000484686 FRMPD1Q5SYB0 1578 aa8□□□□□ -1.13
CNTN4-216ENST00000484686 DNMT1P26358 1616 aaKnown RBP7.99□□□□□ -1.13
CNTN4-216ENST00000484686 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.99□□□□□ -1.13
CNTN4-216ENST00000484686 TRIM52Q96A61 297 aa7.99□□□□□ -1.13
CNTN4-216ENST00000484686 RICTORQ6R327 1708 aa7.99□□□□□ -1.13
CNTN4-216ENST00000484686 ATP7AQ04656 1500 aa7.98□□□□□ -1.13
CNTN4-216ENST00000484686 ARHGEF5Q12774 1597 aa7.98□□□□□ -1.13
CNTN4-216ENST00000484686 MLH3Q9UHC1 1453 aa7.97□□□□□ -1.13
CNTN4-216ENST00000484686 KIDINS220Q9ULH0 1771 aa7.97□□□□□ -1.13
CNTN4-216ENST00000484686 ZFYVE16Q7Z3T8 1539 aa7.97□□□□□ -1.13
CNTN4-216ENST00000484686 KDM5CP41229 1560 aa7.97□□□□□ -1.13
CNTN4-216ENST00000484686 HECW2Q9P2P5 1572 aa7.96□□□□□ -1.13
CNTN4-216ENST00000484686 NAIPQ13075 1403 aa7.96□□□□□ -1.13
CNTN4-216ENST00000484686 ANKRD50Q9ULJ7 1429 aa7.96□□□□□ -1.13
CNTN4-216ENST00000484686 RAB3GAP2Q9H2M9 1393 aa7.95□□□□□ -1.14
CNTN4-216ENST00000484686 RTEL1-TNFRSF6BF6WH68 1400 aa7.95□□□□□ -1.14
CNTN4-216ENST00000484686 DHX29Q7Z478 1369 aaKnown RBP7.95□□□□□ -1.14
CNTN4-216ENST00000484686 A2MP01023 1474 aa7.95□□□□□ -1.14
CNTN4-216ENST00000484686 ABCA6Q8N139 1617 aa7.95□□□□□ -1.14
CNTN4-216ENST00000484686 ATP10AO60312 1499 aa7.95□□□□□ -1.14
CNTN4-216ENST00000484686 SHANK2Q9UPX8 1470 aa7.94□□□□□ -1.14
CNTN4-216ENST00000484686 ROCK1Q13464 1354 aa7.94□□□□□ -1.14
CNTN4-216ENST00000484686 HFM1A2PYH4 1435 aa7.94□□□□□ -1.14
CNTN4-216ENST00000484686 SETD5Q9C0A6 1442 aa7.94□□□□□ -1.14
CNTN4-216ENST00000484686 INO80Q9ULG1 1556 aaPredicted RBP7.94□□□□□ -1.14
CNTN4-216ENST00000484686 CROCC2H7BZ55 1655 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms