RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 LOC105371045A0A1W2PR82 267 aa28.73■■■□□ 2.19
RNF38-207ENST00000484621 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
RNF38-207ENST00000484621 AKNAQ7Z591 1439 aa28.72■■■□□ 2.19
RNF38-207ENST00000484621 CERKQ8TCT0 537 aa28.72■■■□□ 2.19
RNF38-207ENST00000484621 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
RNF38-207ENST00000484621 TTC37Q6PGP7 1564 aa28.71■■■□□ 2.19
RNF38-207ENST00000484621 ZMYM4Q5VZL5 1548 aa28.7■■■□□ 2.19
RNF38-207ENST00000484621 ILDR2Q71H61 639 aa28.7■■■□□ 2.18
RNF38-207ENST00000484621 CCDC18Q5T9S5 1454 aa28.7■■■□□ 2.18
RNF38-207ENST00000484621 ZFYVE16Q7Z3T8 1539 aa28.69■■■□□ 2.18
RNF38-207ENST00000484621 FANCAO15360 1455 aa28.68■■■□□ 2.18
RNF38-207ENST00000484621 FER1L4A9Z1Z3 1794 aa28.67■■■□□ 2.18
RNF38-207ENST00000484621 TROQ12816 1431 aaPredicted RBP28.66■■■□□ 2.18
RNF38-207ENST00000484621 MLECQ14165 292 aa28.65■■■□□ 2.18
RNF38-207ENST00000484621 KIF14Q15058 1648 aa28.64■■■□□ 2.18
RNF38-207ENST00000484621 CFAP74Q9C0B2 1584 aa28.62■■■□□ 2.17
RNF38-207ENST00000484621 MYO5CQ9NQX4 1742 aa28.6■■■□□ 2.17
RNF38-207ENST00000484621 POGZQ7Z3K3 1410 aa28.58■■■□□ 2.17
RNF38-207ENST00000484621 STRCQ7RTU9 1775 aa28.55■■■□□ 2.16
RNF38-207ENST00000484621 ARHGEF12Q9NZN5 1544 aa28.54■■■□□ 2.16
RNF38-207ENST00000484621 PLCH2O75038 1416 aa28.54■■■□□ 2.16
RNF38-207ENST00000484621 DISP3Q9P2K9 1392 aa28.54■■■□□ 2.16
RNF38-207ENST00000484621 PREX1Q8TCU6 1659 aa28.53■■■□□ 2.16
RNF38-207ENST00000484621 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
RNF38-207ENST00000484621 MAGI2Q86UL8 1455 aa28.48■■■□□ 2.15
RNF38-207ENST00000484621 SCAPERQ9BY12 1400 aa28.48■■■□□ 2.15
RNF38-207ENST00000484621 EFCAB2Q5VUJ9 269 aa28.47■■■□□ 2.15
RNF38-207ENST00000484621 ARHGAP5Q13017 1502 aa28.46■■■□□ 2.15
RNF38-207ENST00000484621 SOCS7O14512 581 aa28.44■■■□□ 2.14
RNF38-207ENST00000484621 CDC42BPBQ9Y5S2 1711 aa28.43■■■□□ 2.14
RNF38-207ENST00000484621 MTUS2Q5JR59 1369 aa28.42■■■□□ 2.14
RNF38-207ENST00000484621 ATP10AO60312 1499 aa28.41■■■□□ 2.14
RNF38-207ENST00000484621 C9orf84Q5VXU9 1444 aa28.41■■■□□ 2.14
RNF38-207ENST00000484621 PREX2Q70Z35 1606 aa28.4■■■□□ 2.14
RNF38-207ENST00000484621 SPATA31D1Q6ZQQ2 1576 aa28.4■■■□□ 2.14
RNF38-207ENST00000484621 CDC42BPAQ5VT25 1732 aa28.39■■■□□ 2.14
RNF38-207ENST00000484621 VPS8Q8N3P4 1428 aa28.38■■■□□ 2.13
RNF38-207ENST00000484621 EHBP1L1Q8N3D4 1523 aa28.33■■■□□ 2.13
RNF38-207ENST00000484621 DIP2CQ9Y2E4 1556 aa28.29■■■□□ 2.12
RNF38-207ENST00000484621 UHRF1BP1Q6BDS2 1440 aa28.29■■■□□ 2.12
RNF38-207ENST00000484621 C3P01024 1663 aa28.29■■■□□ 2.12
RNF38-207ENST00000484621 LTBP4Q8N2S1 1624 aa28.29■■■□□ 2.12
RNF38-207ENST00000484621 CCNB3Q8WWL7 1395 aa28.28■■■□□ 2.12
RNF38-207ENST00000484621 KDM5CP41229 1560 aa28.28■■■□□ 2.12
RNF38-207ENST00000484621 TIAM1Q13009 1591 aa28.28■■■□□ 2.12
RNF38-207ENST00000484621 GPATCH8Q9UKJ3 1502 aaKnown RBP28.27■■■□□ 2.12
RNF38-207ENST00000484621 ABCA6Q8N139 1617 aa28.26■■■□□ 2.11
RNF38-207ENST00000484621 ZNF518AQ6AHZ1 1483 aa28.26■■■□□ 2.11
RNF38-207ENST00000484621 ZNF777Q9ULD5 760 aaPredicted RBP28.25■■■□□ 2.11
RNF38-207ENST00000484621 ABCC1P33527 1531 aa28.24■■■□□ 2.11
RNF38-207ENST00000484621 AFAP1Q8N556 730 aa28.24■■■□□ 2.11
RNF38-207ENST00000484621 ITSN2Q9NZM3 1697 aa28.23■■■□□ 2.11
RNF38-207ENST00000484621 SUPT6HQ7KZ85 1726 aaKnown RBP28.22■■■□□ 2.11
RNF38-207ENST00000484621 PTPRTO14522 1441 aa28.21■■■□□ 2.11
RNF38-207ENST00000484621 CFDP1Q9UEE9 299 aaPredicted RBP28.21■■■□□ 2.11
RNF38-207ENST00000484621 MYT1LQ9UL68 1186 aa28.2■■■□□ 2.1
RNF38-207ENST00000484621 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
RNF38-207ENST00000484621 DMRT2Q9Y5R5 561 aa28.19■■■□□ 2.1
RNF38-207ENST00000484621 SETD1BQ9UPS6 1966 aaKnown RBP28.17■■■□□ 2.1
RNF38-207ENST00000484621 REREQ9P2R6 1566 aa28.16■■■□□ 2.1
RNF38-207ENST00000484621 TRAPPC8Q9Y2L5 1435 aa28.16■■■□□ 2.1
RNF38-207ENST00000484621 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
RNF38-207ENST00000484621 LRRC9Q6ZRR7 1453 aa28.15■■■□□ 2.1
RNF38-207ENST00000484621 MAP3K1Q13233 1512 aa28.14■■■□□ 2.1
RNF38-207ENST00000484621 SYCP2Q9BX26 1530 aa28.14■■■□□ 2.1
RNF38-207ENST00000484621 NCOA1Q15788 1441 aa28.12■■■□□ 2.09
RNF38-207ENST00000484621 APLP2Q06481 763 aa28.12■■■□□ 2.09
RNF38-207ENST00000484621 PLEKHH2Q8IVE3 1493 aa28.12■■■□□ 2.09
RNF38-207ENST00000484621 HNRNPMP52272 730 aaKnown RBP eCLIP28.1■■■□□ 2.09
RNF38-207ENST00000484621 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
RNF38-207ENST00000484621 KANK4Q5T7N3 995 aaPredicted RBP28.07■■■□□ 2.08
RNF38-207ENST00000484621 KIAA1107Q9UPP5 1409 aa28.07■■■□□ 2.08
RNF38-207ENST00000484621 AGLP35573 1532 aa28.07■■■□□ 2.08
RNF38-207ENST00000484621 KIDINS220Q9ULH0 1771 aa28.05■■■□□ 2.08
RNF38-207ENST00000484621 CAMSAP1Q5T5Y3 1602 aa28.04■■■□□ 2.08
RNF38-207ENST00000484621 ZNF644Q9H582 1327 aaPredicted RBP28.04■■■□□ 2.08
RNF38-207ENST00000484621 IQSEC2Q5JU85 1478 aa28.03■■■□□ 2.08
RNF38-207ENST00000484621 SPAG9O60271 1321 aaKnown RBP28.01■■■□□ 2.07
RNF38-207ENST00000484621 ZNF335Q9H4Z2 1342 aaPredicted RBP27.99■■■□□ 2.07
RNF38-207ENST00000484621 NCKAP5LQ9HCH0 1330 aa27.97■■■□□ 2.07
RNF38-207ENST00000484621 CAMSAP2Q08AD1 1489 aa27.96■■■□□ 2.07
RNF38-207ENST00000484621 ATP7AQ04656 1500 aa27.96■■■□□ 2.07
RNF38-207ENST00000484621 MBD5Q9P267 1494 aa27.94■■■□□ 2.06
RNF38-207ENST00000484621 INO80Q9ULG1 1556 aaPredicted RBP27.94■■■□□ 2.06
RNF38-207ENST00000484621 MROH2AA6NES4 1674 aa27.92■■■□□ 2.06
RNF38-207ENST00000484621 MYO3AQ8NEV4 1616 aa27.9■■■□□ 2.06
RNF38-207ENST00000484621 ESF1Q9H501 851 aaKnown RBP27.9■■■□□ 2.06
RNF38-207ENST00000484621 MYOM3Q5VTT5 1437 aa27.9■■■□□ 2.06
RNF38-207ENST00000484621 CNTLNQ9NXG0 1405 aa27.9■■■□□ 2.06
RNF38-207ENST00000484621 CLTCQ00610 1675 aaKnown RBP27.88■■■□□ 2.05
RNF38-207ENST00000484621 UBAP1LF5GYI3 381 aa27.88■■■□□ 2.05
RNF38-207ENST00000484621 CCDC141Q6ZP82 1450 aa27.88■■■□□ 2.05
RNF38-207ENST00000484621 NPATQ14207 1427 aa27.87■■■□□ 2.05
RNF38-207ENST00000484621 ZNF142P52746 1687 aaPredicted RBP27.87■■■□□ 2.05
RNF38-207ENST00000484621 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
RNF38-207ENST00000484621 ZMYM3Q14202 1370 aa27.85■■■□□ 2.05
RNF38-207ENST00000484621 MIA2Q96PC5 1412 aa27.84■■■□□ 2.05
RNF38-207ENST00000484621 ARHGEF5Q12774 1597 aa27.84■■■□□ 2.05
RNF38-207ENST00000484621 ADGBQ8N7X0 1667 aa27.84■■■□□ 2.05
RNF38-207ENST00000484621 RTEL1-TNFRSF6BF6WH68 1400 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms