RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 ARID3CA6NKF2 412 aa10.03□□□□□ -0.8
PDZRN3-209ENST00000484487 KIF14Q15058 1648 aa10.03□□□□□ -0.8
PDZRN3-209ENST00000484487 TROQ12816 1431 aaPredicted RBP10.02□□□□□ -0.81
PDZRN3-209ENST00000484487 DSG3P32926 999 aa10.02□□□□□ -0.81
PDZRN3-209ENST00000484487 KANK4Q5T7N3 995 aaPredicted RBP10.01□□□□□ -0.81
PDZRN3-209ENST00000484487 ITSN2Q9NZM3 1697 aa10.01□□□□□ -0.81
PDZRN3-209ENST00000484487 MAGI3Q5TCQ9 1506 aa10.01□□□□□ -0.81
PDZRN3-209ENST00000484487 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
PDZRN3-209ENST00000484487 MAPKBP1O60336 1514 aa10□□□□□ -0.81
PDZRN3-209ENST00000484487 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
PDZRN3-209ENST00000484487 PPARGC1BQ86YN6 1023 aaKnown RBP9.99□□□□□ -0.81
PDZRN3-209ENST00000484487 NCOA2Q15596 1464 aa9.98□□□□□ -0.81
PDZRN3-209ENST00000484487 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
PDZRN3-209ENST00000484487 CDC42BPAQ5VT25 1732 aa9.98□□□□□ -0.81
PDZRN3-209ENST00000484487 ABCB7O75027 752 aa9.97□□□□□ -0.81
PDZRN3-209ENST00000484487 ASXL2Q76L83 1435 aa9.97□□□□□ -0.81
PDZRN3-209ENST00000484487 ZBTB22O15209 634 aa9.95□□□□□ -0.82
PDZRN3-209ENST00000484487 ABCA9Q8IUA7 1624 aa9.95□□□□□ -0.82
PDZRN3-209ENST00000484487 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
PDZRN3-209ENST00000484487 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
PDZRN3-209ENST00000484487 CDC42BPBQ9Y5S2 1711 aa9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 TRIM26Q12899 539 aaPredicted RBP9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 KCNH8Q96L42 1107 aa9.93□□□□□ -0.82
PDZRN3-209ENST00000484487 GLI2P10070 1586 aa9.92□□□□□ -0.82
PDZRN3-209ENST00000484487 TTC37Q6PGP7 1564 aa9.92□□□□□ -0.82
PDZRN3-209ENST00000484487 MIA2Q96PC5 1412 aa9.92□□□□□ -0.82
PDZRN3-209ENST00000484487 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
PDZRN3-209ENST00000484487 KIF13AQ9H1H9 1805 aa9.91□□□□□ -0.82
PDZRN3-209ENST00000484487 PHLDB1Q86UU1 1377 aa9.91□□□□□ -0.82
PDZRN3-209ENST00000484487 PTPN23Q9H3S7 1636 aa9.91□□□□□ -0.82
PDZRN3-209ENST00000484487 CFAP74Q9C0B2 1584 aa9.91□□□□□ -0.82
PDZRN3-209ENST00000484487 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.82
PDZRN3-209ENST00000484487 RRBP1Q9P2E9 1410 aaKnown RBP9.9□□□□□ -0.82
PDZRN3-209ENST00000484487 DIP2BQ9P265 1576 aa9.9□□□□□ -0.82
PDZRN3-209ENST00000484487 GPATCH8Q9UKJ3 1502 aaKnown RBP9.9□□□□□ -0.82
PDZRN3-209ENST00000484487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.89□□□□□ -0.83
PDZRN3-209ENST00000484487 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
PDZRN3-209ENST00000484487 ARHGAP5Q13017 1502 aa9.88□□□□□ -0.83
PDZRN3-209ENST00000484487 TSPOAP1O95153 1857 aa9.88□□□□□ -0.83
PDZRN3-209ENST00000484487 CFDP1Q9UEE9 299 aaPredicted RBP9.88□□□□□ -0.83
PDZRN3-209ENST00000484487 PLCH2O75038 1416 aa9.88□□□□□ -0.83
PDZRN3-209ENST00000484487 TCOF1Q13428 1488 aaKnown RBP9.87□□□□□ -0.83
PDZRN3-209ENST00000484487 PLEKHH2Q8IVE3 1493 aa9.86□□□□□ -0.83
PDZRN3-209ENST00000484487 EFCAB2Q5VUJ9 269 aa9.86□□□□□ -0.83
PDZRN3-209ENST00000484487 CD109Q6YHK3 1445 aa9.86□□□□□ -0.83
PDZRN3-209ENST00000484487 FAM50AQ14320 339 aaKnown RBP9.85□□□□□ -0.83
PDZRN3-209ENST00000484487 CAMSAP2Q08AD1 1489 aa9.85□□□□□ -0.83
PDZRN3-209ENST00000484487 SAMD9LQ8IVG5 1584 aa9.84□□□□□ -0.83
PDZRN3-209ENST00000484487 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
PDZRN3-209ENST00000484487 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
PDZRN3-209ENST00000484487 ARHGEF5Q12774 1597 aa9.84□□□□□ -0.83
PDZRN3-209ENST00000484487 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 RSPH4AQ5TD94 716 aa9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 ZNF777Q9ULD5 760 aaPredicted RBP9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 ATF5Q9Y2D1 282 aaPredicted RBP9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 FANCAO15360 1455 aa9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 TEX14Q8IWB6 1497 aa9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 ADGBQ8N7X0 1667 aa9.83□□□□□ -0.84
PDZRN3-209ENST00000484487 NEO1Q92859 1461 aa9.82□□□□□ -0.84
PDZRN3-209ENST00000484487 ABCC1P33527 1531 aa9.82□□□□□ -0.84
PDZRN3-209ENST00000484487 KIAA1107Q9UPP5 1409 aa9.82□□□□□ -0.84
PDZRN3-209ENST00000484487 PPRC1Q5VV67 1664 aaKnown RBP9.81□□□□□ -0.84
PDZRN3-209ENST00000484487 POLA2Q14181 598 aa9.81□□□□□ -0.84
PDZRN3-209ENST00000484487 PCGF6Q9BYE7 350 aa9.81□□□□□ -0.84
PDZRN3-209ENST00000484487 SYCP2Q9BX26 1530 aa9.79□□□□□ -0.84
PDZRN3-209ENST00000484487 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
PDZRN3-209ENST00000484487 ZNF644Q9H582 1327 aaPredicted RBP9.79□□□□□ -0.84
PDZRN3-209ENST00000484487 ADGRL1O94910 1474 aa9.79□□□□□ -0.84
PDZRN3-209ENST00000484487 CCDC141Q6ZP82 1450 aa9.79□□□□□ -0.84
PDZRN3-209ENST00000484487 DAPK1P53355 1430 aa9.78□□□□□ -0.84
PDZRN3-209ENST00000484487 MAST1Q9Y2H9 1570 aa9.78□□□□□ -0.84
PDZRN3-209ENST00000484487 SHANK2Q9UPX8 1470 aa9.78□□□□□ -0.84
PDZRN3-209ENST00000484487 TSPY4P0CV99 314 aa9.77□□□□□ -0.85
PDZRN3-209ENST00000484487 TSPY10P0CW01 314 aa9.77□□□□□ -0.85
PDZRN3-209ENST00000484487 ITGAEP38570 1179 aa9.77□□□□□ -0.85
PDZRN3-209ENST00000484487 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
PDZRN3-209ENST00000484487 GCC2Q8IWJ2 1684 aa9.77□□□□□ -0.85
PDZRN3-209ENST00000484487 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
PDZRN3-209ENST00000484487 ABCC5O15440 1437 aa9.76□□□□□ -0.85
PDZRN3-209ENST00000484487 HNRNPMP52272 730 aaKnown RBP eCLIP9.76□□□□□ -0.85
PDZRN3-209ENST00000484487 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
PDZRN3-209ENST00000484487 ZNF518AQ6AHZ1 1483 aa9.75□□□□□ -0.85
PDZRN3-209ENST00000484487 ROCK1Q13464 1354 aa9.75□□□□□ -0.85
PDZRN3-209ENST00000484487 DENND4BO75064 1496 aaPredicted RBP9.74□□□□□ -0.85
PDZRN3-209ENST00000484487 ARHGEF12Q9NZN5 1544 aa9.74□□□□□ -0.85
PDZRN3-209ENST00000484487 PLXNC1O60486 1568 aa9.74□□□□□ -0.85
PDZRN3-209ENST00000484487 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
PDZRN3-209ENST00000484487 ADGRL2O95490 1459 aa9.73□□□□□ -0.85
PDZRN3-209ENST00000484487 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
PDZRN3-209ENST00000484487 RTEL1-TNFRSF6BF6WH68 1400 aa9.73□□□□□ -0.85
PDZRN3-209ENST00000484487 C9orf84Q5VXU9 1444 aa9.73□□□□□ -0.85
PDZRN3-209ENST00000484487 POGZQ7Z3K3 1410 aa9.73□□□□□ -0.85
PDZRN3-209ENST00000484487 KDM5CP41229 1560 aa9.72□□□□□ -0.85
PDZRN3-209ENST00000484487 INO80Q9ULG1 1556 aaPredicted RBP9.72□□□□□ -0.85
PDZRN3-209ENST00000484487 PTPRKQ15262 1439 aa9.72□□□□□ -0.85
PDZRN3-209ENST00000484487 TRAPPC8Q9Y2L5 1435 aa9.72□□□□□ -0.85
PDZRN3-209ENST00000484487 HECW2Q9P2P5 1572 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms