RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 KIF14Q15058 1648 aa11.08□□□□□ -0.64
BRCA1-216ENST00000484087 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
BRCA1-216ENST00000484087 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
BRCA1-216ENST00000484087 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
BRCA1-216ENST00000484087 TEX14Q8IWB6 1497 aa11.05□□□□□ -0.64
BRCA1-216ENST00000484087 MAGI3Q5TCQ9 1506 aa11.05□□□□□ -0.64
BRCA1-216ENST00000484087 CEP162Q5TB80 1403 aa11.04□□□□□ -0.64
BRCA1-216ENST00000484087 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
BRCA1-216ENST00000484087 FRMPD1Q5SYB0 1578 aa11.01□□□□□ -0.65
BRCA1-216ENST00000484087 CASKIN1Q8WXD9 1431 aa11.01□□□□□ -0.65
BRCA1-216ENST00000484087 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
BRCA1-216ENST00000484087 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
BRCA1-216ENST00000484087 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
BRCA1-216ENST00000484087 RICTORQ6R327 1708 aa10.97□□□□□ -0.65
BRCA1-216ENST00000484087 CDC42BPBQ9Y5S2 1711 aa10.97□□□□□ -0.65
BRCA1-216ENST00000484087 FANCAO15360 1455 aa10.97□□□□□ -0.65
BRCA1-216ENST00000484087 TROQ12816 1431 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-216ENST00000484087 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
BRCA1-216ENST00000484087 RAPGEF3O95398 923 aa10.96□□□□□ -0.65
BRCA1-216ENST00000484087 APLP2Q06481 763 aa10.96□□□□□ -0.65
BRCA1-216ENST00000484087 CDC42BPAQ5VT25 1732 aa10.96□□□□□ -0.66
BRCA1-216ENST00000484087 CFAP74Q9C0B2 1584 aa10.95□□□□□ -0.66
BRCA1-216ENST00000484087 ARAP3Q8WWN8 1544 aa10.95□□□□□ -0.66
BRCA1-216ENST00000484087 PREX2Q70Z35 1606 aa10.95□□□□□ -0.66
BRCA1-216ENST00000484087 SIGLEC1Q9BZZ2 1709 aa10.94□□□□□ -0.66
BRCA1-216ENST00000484087 NEO1Q92859 1461 aa10.94□□□□□ -0.66
BRCA1-216ENST00000484087 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
BRCA1-216ENST00000484087 ARHGAP5Q13017 1502 aa10.93□□□□□ -0.66
BRCA1-216ENST00000484087 ADGRL1O94910 1474 aa10.93□□□□□ -0.66
BRCA1-216ENST00000484087 AKNAQ7Z591 1439 aa10.93□□□□□ -0.66
BRCA1-216ENST00000484087 KDM4FA0A1W2PPD8 638 aa10.92□□□□□ -0.66
BRCA1-216ENST00000484087 PLCH2O75038 1416 aa10.91□□□□□ -0.66
BRCA1-216ENST00000484087 DENND4BO75064 1496 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-216ENST00000484087 ABCB7O75027 752 aa10.89□□□□□ -0.67
BRCA1-216ENST00000484087 CDK11AQ9UQ88 783 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-216ENST00000484087 ARHGEF40Q8TER5 1519 aa10.89□□□□□ -0.67
BRCA1-216ENST00000484087 ITSN2Q9NZM3 1697 aa10.89□□□□□ -0.67
BRCA1-216ENST00000484087 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
BRCA1-216ENST00000484087 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 SCAPERQ9BY12 1400 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 YEATS2Q9ULM3 1422 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 SAMD9LQ8IVG5 1584 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 EHBP1L1Q8N3D4 1523 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 ARHGEF12Q9NZN5 1544 aa10.88□□□□□ -0.67
BRCA1-216ENST00000484087 ABCC1P33527 1531 aa10.87□□□□□ -0.67
BRCA1-216ENST00000484087 POGZQ7Z3K3 1410 aa10.87□□□□□ -0.67
BRCA1-216ENST00000484087 ZMYM4Q5VZL5 1548 aa10.86□□□□□ -0.67
BRCA1-216ENST00000484087 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
BRCA1-216ENST00000484087 ZFYVE16Q7Z3T8 1539 aa10.86□□□□□ -0.67
BRCA1-216ENST00000484087 SYCP2Q9BX26 1530 aa10.86□□□□□ -0.67
BRCA1-216ENST00000484087 GPATCH8Q9UKJ3 1502 aaKnown RBP10.85□□□□□ -0.67
BRCA1-216ENST00000484087 SUPT6HQ7KZ85 1726 aaKnown RBP10.84□□□□□ -0.67
BRCA1-216ENST00000484087 ZNF777Q9ULD5 760 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-216ENST00000484087 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
BRCA1-216ENST00000484087 MADDQ8WXG6 1647 aa10.84□□□□□ -0.67
BRCA1-216ENST00000484087 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
BRCA1-216ENST00000484087 BCORL1Q5H9F3 1711 aa10.84□□□□□ -0.67
BRCA1-216ENST00000484087 TRAPPC8Q9Y2L5 1435 aa10.84□□□□□ -0.67
BRCA1-216ENST00000484087 KDM5CP41229 1560 aa10.83□□□□□ -0.68
BRCA1-216ENST00000484087 HECW2Q9P2P5 1572 aa10.83□□□□□ -0.68
BRCA1-216ENST00000484087 EFCAB2Q5VUJ9 269 aa10.82□□□□□ -0.68
BRCA1-216ENST00000484087 AFAP1Q8N556 730 aa10.82□□□□□ -0.68
BRCA1-216ENST00000484087 DIP2CQ9Y2E4 1556 aa10.82□□□□□ -0.68
BRCA1-216ENST00000484087 RIMS1Q86UR5 1692 aaKnown RBP10.82□□□□□ -0.68
BRCA1-216ENST00000484087 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
BRCA1-216ENST00000484087 ADAMTSL3P82987 1691 aa10.81□□□□□ -0.68
BRCA1-216ENST00000484087 KIDINS220Q9ULH0 1771 aa10.81□□□□□ -0.68
BRCA1-216ENST00000484087 KANK4Q5T7N3 995 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-216ENST00000484087 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-216ENST00000484087 ZNF644Q9H582 1327 aaPredicted RBP10.8□□□□□ -0.68
BRCA1-216ENST00000484087 CCNB3Q8WWL7 1395 aa10.8□□□□□ -0.68
BRCA1-216ENST00000484087 ZNF518AQ6AHZ1 1483 aa10.8□□□□□ -0.68
BRCA1-216ENST00000484087 LRRC9Q6ZRR7 1453 aa10.8□□□□□ -0.68
BRCA1-216ENST00000484087 ARID4BQ4LE39 1312 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-216ENST00000484087 MLECQ14165 292 aa10.78□□□□□ -0.68
BRCA1-216ENST00000484087 FER1L4A9Z1Z3 1794 aa10.78□□□□□ -0.68
BRCA1-216ENST00000484087 HNRNPMP52272 730 aaKnown RBP eCLIP10.77□□□□□ -0.69
BRCA1-216ENST00000484087 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
BRCA1-216ENST00000484087 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-216ENST00000484087 RBM42Q9BTD8 480 aaKnown RBP10.76□□□□□ -0.69
BRCA1-216ENST00000484087 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-216ENST00000484087 CAMSAP2Q08AD1 1489 aa10.76□□□□□ -0.69
BRCA1-216ENST00000484087 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
BRCA1-216ENST00000484087 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
BRCA1-216ENST00000484087 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
BRCA1-216ENST00000484087 ATP7AQ04656 1500 aa10.75□□□□□ -0.69
BRCA1-216ENST00000484087 ATP10AO60312 1499 aa10.74□□□□□ -0.69
BRCA1-216ENST00000484087 ADGBQ8N7X0 1667 aa10.74□□□□□ -0.69
BRCA1-216ENST00000484087 PTPRMP28827 1452 aa10.74□□□□□ -0.69
BRCA1-216ENST00000484087 MLH3Q9UHC1 1453 aa10.73□□□□□ -0.69
BRCA1-216ENST00000484087 MAP3K1Q13233 1512 aa10.72□□□□□ -0.69
BRCA1-216ENST00000484087 MBD5Q9P267 1494 aa10.72□□□□□ -0.69
BRCA1-216ENST00000484087 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-216ENST00000484087 PPARGC1BQ86YN6 1023 aaKnown RBP10.7□□□□□ -0.7
BRCA1-216ENST00000484087 PLEKHH2Q8IVE3 1493 aa10.7□□□□□ -0.7
BRCA1-216ENST00000484087 REREQ9P2R6 1566 aa10.7□□□□□ -0.7
BRCA1-216ENST00000484087 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
BRCA1-216ENST00000484087 PLXNC1O60486 1568 aa10.69□□□□□ -0.7
BRCA1-216ENST00000484087 MYOM3Q5VTT5 1437 aa10.69□□□□□ -0.7
BRCA1-216ENST00000484087 KIAA1107Q9UPP5 1409 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms