RNA–Protein interactions for RNA: ENST00000484078.5

SUPT20H-217, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 1,876 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-217ENST00000484078 ERCC6Q03468 1493 aa9.9□□□□□ -0.82
SUPT20H-217ENST00000484078 LAMC3Q9Y6N6 1575 aa9.9□□□□□ -0.82
SUPT20H-217ENST00000484078 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
SUPT20H-217ENST00000484078 E2F4Q16254 413 aa9.87□□□□□ -0.83
SUPT20H-217ENST00000484078 CLCN6P51797 869 aa9.87□□□□□ -0.83
SUPT20H-217ENST00000484078 NLRP6P59044 892 aa9.87□□□□□ -0.83
SUPT20H-217ENST00000484078 PHF12Q96QT6 1004 aa9.87□□□□□ -0.83
SUPT20H-217ENST00000484078 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
SUPT20H-217ENST00000484078 POTEMA6NI47 508 aa9.86□□□□□ -0.83
SUPT20H-217ENST00000484078 ARHGEF1Q92888 912 aaKnown RBP9.86□□□□□ -0.83
SUPT20H-217ENST00000484078 ZC3H15Q8WU90 426 aaKnown RBP9.85□□□□□ -0.83
SUPT20H-217ENST00000484078 PDS5BQ9NTI5 1447 aa9.85□□□□□ -0.83
SUPT20H-217ENST00000484078 SOX12O15370 315 aa9.84□□□□□ -0.83
SUPT20H-217ENST00000484078 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
SUPT20H-217ENST00000484078 TMEM132AQ24JP5 1023 aa9.84□□□□□ -0.83
SUPT20H-217ENST00000484078 TESPA1A2RU30 521 aaPredicted RBP9.83□□□□□ -0.84
SUPT20H-217ENST00000484078 KIF21AQ7Z4S6 1674 aa9.83□□□□□ -0.84
SUPT20H-217ENST00000484078 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
SUPT20H-217ENST00000484078 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
SUPT20H-217ENST00000484078 PAK3O75914 559 aaPredicted RBP9.81□□□□□ -0.84
SUPT20H-217ENST00000484078 ZRANB1Q9UGI0 708 aa9.81□□□□□ -0.84
SUPT20H-217ENST00000484078 CFTRP13569 1480 aa9.81□□□□□ -0.84
SUPT20H-217ENST00000484078 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
SUPT20H-217ENST00000484078 CRISPLD2Q9H0B8 497 aa9.79□□□□□ -0.84
SUPT20H-217ENST00000484078 SLC24A3Q9HC58 644 aa9.79□□□□□ -0.84
SUPT20H-217ENST00000484078 POTEGQ6S5H5 508 aa9.79□□□□□ -0.84
SUPT20H-217ENST00000484078 CD44P16070 742 aaKnown RBP9.78□□□□□ -0.84
SUPT20H-217ENST00000484078 THOC2Q8NI27 1593 aaKnown RBP9.77□□□□□ -0.85
SUPT20H-217ENST00000484078 PRDM2Q13029 1718 aa9.77□□□□□ -0.85
SUPT20H-217ENST00000484078 MFSD10Q14728 455 aa9.76□□□□□ -0.85
SUPT20H-217ENST00000484078 FANCD2Q9BXW9 1451 aa9.76□□□□□ -0.85
SUPT20H-217ENST00000484078 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
SUPT20H-217ENST00000484078 CEP164Q9UPV0 1460 aa9.75□□□□□ -0.85
SUPT20H-217ENST00000484078 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
SUPT20H-217ENST00000484078 MRC2Q9UBG0 1479 aa9.73□□□□□ -0.85
SUPT20H-217ENST00000484078 DDX27Q96GQ7 796 aaKnown RBP9.72□□□□□ -0.85
SUPT20H-217ENST00000484078 POTEIP0CG38 1075 aa9.72□□□□□ -0.85
SUPT20H-217ENST00000484078 PDE4AP27815 886 aa9.72□□□□□ -0.85
SUPT20H-217ENST00000484078 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.85
SUPT20H-217ENST00000484078 NEUROD2Q15784 382 aa9.71□□□□□ -0.85
SUPT20H-217ENST00000484078 ZMYND10O75800 440 aa9.7□□□□□ -0.86
SUPT20H-217ENST00000484078 WDR62O43379 1518 aa9.7□□□□□ -0.86
SUPT20H-217ENST00000484078 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
SUPT20H-217ENST00000484078 RBM26Q5T8P6 1007 aaKnown RBP9.68□□□□□ -0.86
SUPT20H-217ENST00000484078 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
SUPT20H-217ENST00000484078 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
SUPT20H-217ENST00000484078 DPY19L2Q6NUT2 758 aa9.66□□□□□ -0.86
SUPT20H-217ENST00000484078 GOLGA2Q08379 1002 aa9.65□□□□□ -0.86
SUPT20H-217ENST00000484078 TTLL13PA6NNM8 815 aa9.64□□□□□ -0.87
SUPT20H-217ENST00000484078 ILDR1Q86SU0 546 aaPredicted RBP9.64□□□□□ -0.87
SUPT20H-217ENST00000484078 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
SUPT20H-217ENST00000484078 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
SUPT20H-217ENST00000484078 C14orf37Q86TY3 774 aa9.63□□□□□ -0.87
SUPT20H-217ENST00000484078 PPP1R15BQ5SWA1 713 aa9.62□□□□□ -0.87
SUPT20H-217ENST00000484078 ABCC8Q09428 1581 aa9.62□□□□□ -0.87
SUPT20H-217ENST00000484078 BARGINQ6ZT62 677 aa9.62□□□□□ -0.87
SUPT20H-217ENST00000484078 GPBP1L1Q9HC44 474 aaPredicted RBP9.62□□□□□ -0.87
SUPT20H-217ENST00000484078 BMP2KQ9NSY1 1161 aaPredicted RBP9.62□□□□□ -0.87
SUPT20H-217ENST00000484078 GPHNQ9NQX3 736 aaPredicted RBP9.61□□□□□ -0.87
SUPT20H-217ENST00000484078 TOPBP1Q92547 1522 aa9.61□□□□□ -0.87
SUPT20H-217ENST00000484078 DPYSL4O14531 572 aa9.6□□□□□ -0.87
SUPT20H-217ENST00000484078 DSG2Q14126 1118 aa9.6□□□□□ -0.87
SUPT20H-217ENST00000484078 OTUD5Q96G74 571 aa9.6□□□□□ -0.87
SUPT20H-217ENST00000484078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.6□□□□□ -0.87
SUPT20H-217ENST00000484078 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
SUPT20H-217ENST00000484078 DCBLD2Q96PD2 775 aa9.59□□□□□ -0.87
SUPT20H-217ENST00000484078 GALR2O43603 387 aaPredicted RBP9.57□□□□□ -0.88
SUPT20H-217ENST00000484078 TRIM35Q9UPQ4 493 aa9.57□□□□□ -0.88
SUPT20H-217ENST00000484078 SMYD5Q6GMV2 418 aa9.57□□□□□ -0.88
SUPT20H-217ENST00000484078 TIE1P35590 1138 aa9.56□□□□□ -0.88
SUPT20H-217ENST00000484078 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
SUPT20H-217ENST00000484078 IFT140Q96RY7 1462 aa9.55□□□□□ -0.88
SUPT20H-217ENST00000484078 MICALL2Q8IY33 904 aa9.54□□□□□ -0.88
SUPT20H-217ENST00000484078 PDCD7Q8N8D1 485 aaKnown RBP9.54□□□□□ -0.88
SUPT20H-217ENST00000484078 GPR37O15354 613 aa9.53□□□□□ -0.88
SUPT20H-217ENST00000484078 CUX1P39880 1505 aa9.52□□□□□ -0.88
SUPT20H-217ENST00000484078 PDIA6Q15084 440 aa9.52□□□□□ -0.89
SUPT20H-217ENST00000484078 POLA1P09884 1462 aaPredicted RBP9.52□□□□□ -0.89
SUPT20H-217ENST00000484078 ZNF608Q9ULD9 1512 aaPredicted RBP9.51□□□□□ -0.89
SUPT20H-217ENST00000484078 AK7Q96M32 723 aa9.5□□□□□ -0.89
SUPT20H-217ENST00000484078 SOGA1O94964 1423 aa9.5□□□□□ -0.89
SUPT20H-217ENST00000484078 TARBP1Q13395 1621 aaKnown RBP9.5□□□□□ -0.89
SUPT20H-217ENST00000484078 FGD5Q6ZNL6 1462 aa9.49□□□□□ -0.89
SUPT20H-217ENST00000484078 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
SUPT20H-217ENST00000484078 RAD54L2Q9Y4B4 1467 aa9.49□□□□□ -0.89
SUPT20H-217ENST00000484078 C2orf72A6NCS6 295 aa9.48□□□□□ -0.89
SUPT20H-217ENST00000484078 TRIM66O15016 1216 aa9.48□□□□□ -0.89
SUPT20H-217ENST00000484078 ATN1P54259 1190 aaPredicted RBP9.48□□□□□ -0.89
SUPT20H-217ENST00000484078 FOXK1P85037 733 aa9.48□□□□□ -0.89
SUPT20H-217ENST00000484078 ERICH6Q7L0X2 663 aa9.47□□□□□ -0.89
SUPT20H-217ENST00000484078 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
SUPT20H-217ENST00000484078 KDM4CQ9H3R0 1056 aa9.47□□□□□ -0.89
SUPT20H-217ENST00000484078 AQRO60306 1485 aaKnown RBP eCLIP9.46□□□□□ -0.89
SUPT20H-217ENST00000484078 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.89
SUPT20H-217ENST00000484078 KIF3CO14782 793 aa9.46□□□□□ -0.9
SUPT20H-217ENST00000484078 PLPP6Q8IY26 295 aa9.46□□□□□ -0.9
SUPT20H-217ENST00000484078 EIF4G3O43432 1585 aaKnown RBP9.46□□□□□ -0.9
SUPT20H-217ENST00000484078 IRX5P78411 483 aaPredicted RBP9.45□□□□□ -0.9
SUPT20H-217ENST00000484078 PDE4DQ08499 809 aa9.45□□□□□ -0.9
SUPT20H-217ENST00000484078 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms