RNA–Protein interactions for RNA: ENST00000484032.1

ZNF90-205, Transcript of zinc finger protein 90, human

TSL 3

Gene ZNF90, Length 661 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF90-205	ENST00000484032	PRX	Q9BXM0	1461 aa		14.1	□□□□□ -0.15
ZNF90-205	ENST00000484032	HECW2	Q9P2P5	1572 aa		14.09	□□□□□ -0.15
ZNF90-205	ENST00000484032	CD109	Q6YHK3	1445 aa		14.09	□□□□□ -0.15
ZNF90-205	ENST00000484032	ILDR1	Q86SU0	546 aa	Predicted RBP	14.07	□□□□□ -0.16
ZNF90-205	ENST00000484032	KCNH8	Q96L42	1107 aa		14.06	□□□□□ -0.16
ZNF90-205	ENST00000484032	KIF21B	O75037	1637 aa		14.04	□□□□□ -0.16
ZNF90-205	ENST00000484032	ARAP3	Q8WWN8	1544 aa		14.02	□□□□□ -0.16
ZNF90-205	ENST00000484032	ATP10B	O94823	1461 aa		14.01	□□□□□ -0.17
ZNF90-205	ENST00000484032	ABCA9	Q8IUA7	1624 aa		14.01	□□□□□ -0.17
ZNF90-205	ENST00000484032	SAMD9	Q5K651	1589 aa		14	□□□□□ -0.17
ZNF90-205	ENST00000484032	ARID3C	A6NKF2	412 aa		13.98	□□□□□ -0.17
ZNF90-205	ENST00000484032	P3H3	Q8IVL6	736 aa		13.98	□□□□□ -0.17
ZNF90-205	ENST00000484032	RAPGEF6	Q8TEU7	1601 aa		13.97	□□□□□ -0.17
ZNF90-205	ENST00000484032	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.94	□□□□□ -0.18
ZNF90-205	ENST00000484032	CLEC11A	Q9Y240	323 aa		13.94	□□□□□ -0.18
ZNF90-205	ENST00000484032	ADAMTSL3	P82987	1691 aa		13.93	□□□□□ -0.18
ZNF90-205	ENST00000484032	PHLDB1	Q86UU1	1377 aa		13.93	□□□□□ -0.18
ZNF90-205	ENST00000484032	FRMPD1	Q5SYB0	1578 aa		13.92	□□□□□ -0.18
ZNF90-205	ENST00000484032	NEO1	Q92859	1461 aa		13.92	□□□□□ -0.18
ZNF90-205	ENST00000484032	CSRNP3	Q8WYN3	585 aa		13.91	□□□□□ -0.18
ZNF90-205	ENST00000484032	NUP153	P49790	1475 aa	Known RBP	13.91	□□□□□ -0.18
ZNF90-205	ENST00000484032	PTPRM	P28827	1452 aa		13.89	□□□□□ -0.19
ZNF90-205	ENST00000484032	RAPGEF3	O95398	923 aa		13.89	□□□□□ -0.19
ZNF90-205	ENST00000484032	BCORL1	Q5H9F3	1711 aa		13.89	□□□□□ -0.19
ZNF90-205	ENST00000484032	POTEI	P0CG38	1075 aa		13.88	□□□□□ -0.19
ZNF90-205	ENST00000484032	FHOD3	Q2V2M9	1422 aa		13.87	□□□□□ -0.19
ZNF90-205	ENST00000484032	MADD	Q8WXG6	1647 aa		13.86	□□□□□ -0.19
ZNF90-205	ENST00000484032	RICTOR	Q6R327	1708 aa		13.85	□□□□□ -0.19
ZNF90-205	ENST00000484032	SPDYE2B	A6NHP3	402 aa		13.85	□□□□□ -0.19
ZNF90-205	ENST00000484032	SPDYE6	P0CI01	402 aa		13.85	□□□□□ -0.19
ZNF90-205	ENST00000484032	SPDYE2	Q495Y8	402 aa		13.85	□□□□□ -0.19
ZNF90-205	ENST00000484032	ARHGEF40	Q8TER5	1519 aa		13.85	□□□□□ -0.19
ZNF90-205	ENST00000484032	EEA1	Q15075	1411 aa		13.84	□□□□□ -0.19
ZNF90-205	ENST00000484032	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.83	□□□□□ -0.2
ZNF90-205	ENST00000484032	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
ZNF90-205	ENST00000484032	RANGAP1	P46060	587 aa	Predicted RBP	13.82	□□□□□ -0.2
ZNF90-205	ENST00000484032	CFAP74	Q9C0B2	1584 aa		13.82	□□□□□ -0.2
ZNF90-205	ENST00000484032	PCF11	O94913	1555 aa	Known RBP	13.81	□□□□□ -0.2
ZNF90-205	ENST00000484032	TTC37	Q6PGP7	1564 aa		13.81	□□□□□ -0.2
ZNF90-205	ENST00000484032	CHADL	Q6NUI6	762 aa		13.81	□□□□□ -0.2
ZNF90-205	ENST00000484032	RIMS1	Q86UR5	1692 aa	Known RBP	13.81	□□□□□ -0.2
ZNF90-205	ENST00000484032	FANCA	O15360	1455 aa		13.8	□□□□□ -0.2
ZNF90-205	ENST00000484032	DENND4B	O75064	1496 aa	Predicted RBP	13.8	□□□□□ -0.2
ZNF90-205	ENST00000484032	EFCAB5	A4FU69	1503 aa		13.8	□□□□□ -0.2
ZNF90-205	ENST00000484032	AKNA	Q7Z591	1439 aa		13.8	□□□□□ -0.2
ZNF90-205	ENST00000484032	LMTK3	Q96Q04	1460 aa		13.8	□□□□□ -0.2
ZNF90-205	ENST00000484032	SIGLEC1	Q9BZZ2	1709 aa		13.79	□□□□□ -0.2
ZNF90-205	ENST00000484032	PLEKHD1	A6NEE1	506 aa		13.79	□□□□□ -0.2
ZNF90-205	ENST00000484032	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.79	□□□□□ -0.2
ZNF90-205	ENST00000484032	ZMYM4	Q5VZL5	1548 aa		13.79	□□□□□ -0.2
ZNF90-205	ENST00000484032	CDK13	Q14004	1512 aa	Known RBP	13.76	□□□□□ -0.21
ZNF90-205	ENST00000484032	FBXO41	Q8TF61	875 aa		13.76	□□□□□ -0.21
ZNF90-205	ENST00000484032	FOXD4L1	Q9NU39	408 aa		13.76	□□□□□ -0.21
ZNF90-205	ENST00000484032	ZFYVE16	Q7Z3T8	1539 aa		13.74	□□□□□ -0.21
ZNF90-205	ENST00000484032	YEATS2	Q9ULM3	1422 aa		13.74	□□□□□ -0.21
ZNF90-205	ENST00000484032	HECW1	Q76N89	1606 aa		13.73	□□□□□ -0.21
ZNF90-205	ENST00000484032	MAGI2	Q86UL8	1455 aa		13.73	□□□□□ -0.21
ZNF90-205	ENST00000484032	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.72	□□□□□ -0.21
ZNF90-205	ENST00000484032	POGZ	Q7Z3K3	1410 aa		13.72	□□□□□ -0.21
ZNF90-205	ENST00000484032	PLCH2	O75038	1416 aa		13.71	□□□□□ -0.22
ZNF90-205	ENST00000484032	FER1L4	A9Z1Z3	1794 aa		13.71	□□□□□ -0.22
ZNF90-205	ENST00000484032	MYO5C	Q9NQX4	1742 aa		13.7	□□□□□ -0.22
ZNF90-205	ENST00000484032	SCAPER	Q9BY12	1400 aa		13.69	□□□□□ -0.22
ZNF90-205	ENST00000484032	HSPA2	P54652	639 aa		13.67	□□□□□ -0.22
ZNF90-205	ENST00000484032	KIF14	Q15058	1648 aa		13.67	□□□□□ -0.22
ZNF90-205	ENST00000484032	FMN1	Q68DA7	1419 aa		13.66	□□□□□ -0.22
ZNF90-205	ENST00000484032	ARHGAP35	Q9NRY4	1499 aa		13.66	□□□□□ -0.22
ZNF90-205	ENST00000484032	ARHGEF12	Q9NZN5	1544 aa		13.65	□□□□□ -0.22
ZNF90-205	ENST00000484032	LRRIQ1	Q96JM4	1722 aa		13.64	□□□□□ -0.23
ZNF90-205	ENST00000484032	ATP10A	O60312	1499 aa		13.64	□□□□□ -0.23
ZNF90-205	ENST00000484032	MLEC	Q14165	292 aa		13.64	□□□□□ -0.23
ZNF90-205	ENST00000484032	C9orf84	Q5VXU9	1444 aa		13.64	□□□□□ -0.23
ZNF90-205	ENST00000484032	PREX1	Q8TCU6	1659 aa		13.63	□□□□□ -0.23
ZNF90-205	ENST00000484032	UBTF	P17480	764 aa	Known RBP	13.62	□□□□□ -0.23
ZNF90-205	ENST00000484032	EFCAB2	Q5VUJ9	269 aa		13.62	□□□□□ -0.23
ZNF90-205	ENST00000484032	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.62	□□□□□ -0.23
ZNF90-205	ENST00000484032	KDM5C	P41229	1560 aa		13.62	□□□□□ -0.23
ZNF90-205	ENST00000484032	EHMT2	Q96KQ7	1210 aa		13.61	□□□□□ -0.23
ZNF90-205	ENST00000484032	TRO	Q12816	1431 aa	Predicted RBP	13.61	□□□□□ -0.23
ZNF90-205	ENST00000484032	ZNF518A	Q6AHZ1	1483 aa		13.61	□□□□□ -0.23
ZNF90-205	ENST00000484032	ARHGAP5	Q13017	1502 aa		13.6	□□□□□ -0.23
ZNF90-205	ENST00000484032	CDC42BPB	Q9Y5S2	1711 aa		13.59	□□□□□ -0.23
ZNF90-205	ENST00000484032	CD44	P16070	742 aa	Known RBP	13.59	□□□□□ -0.23
ZNF90-205	ENST00000484032	ZNF692	Q9BU19	519 aa	Predicted RBP	13.59	□□□□□ -0.23
ZNF90-205	ENST00000484032	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.59	□□□□□ -0.23
ZNF90-205	ENST00000484032	DIP2C	Q9Y2E4	1556 aa		13.58	□□□□□ -0.23
ZNF90-205	ENST00000484032	SSUH2	Q9Y2M2	353 aa		13.58	□□□□□ -0.24
ZNF90-205	ENST00000484032	RERE	Q9P2R6	1566 aa		13.58	□□□□□ -0.24
ZNF90-205	ENST00000484032	ABCA6	Q8N139	1617 aa		13.57	□□□□□ -0.24
ZNF90-205	ENST00000484032	CLIP1	P30622	1438 aa		13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	STRC	Q7RTU9	1775 aa		13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	CEBPA	P49715	358 aa	Predicted RBP	13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	AFAP1	Q8N556	730 aa		13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	CERK	Q8TCT0	537 aa		13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	PREX2	Q70Z35	1606 aa		13.56	□□□□□ -0.24
ZNF90-205	ENST00000484032	ABCC1	P33527	1531 aa		13.54	□□□□□ -0.24
ZNF90-205	ENST00000484032	ITSN2	Q9NZM3	1697 aa		13.54	□□□□□ -0.24
ZNF90-205	ENST00000484032	PRR29	P0C7W0	189 aa		13.54	□□□□□ -0.24
ZNF90-205	ENST00000484032	DCBLD2	Q96PD2	775 aa		13.54	□□□□□ -0.24
ZNF90-205	ENST00000484032	MLH3	Q9UHC1	1453 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms