RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 PREX2Q70Z35 1606 aa30.29■■■□□ 2.44
PKD1-217ENST00000483814 CDC42BPAQ5VT25 1732 aa30.28■■■□□ 2.44
PKD1-217ENST00000483814 EHBP1L1Q8N3D4 1523 aa30.24■■■□□ 2.43
PKD1-217ENST00000483814 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
PKD1-217ENST00000483814 SCAPERQ9BY12 1400 aa30.23■■■□□ 2.43
PKD1-217ENST00000483814 TIAM1Q13009 1591 aa30.21■■■□□ 2.43
PKD1-217ENST00000483814 POGZQ7Z3K3 1410 aa30.16■■■□□ 2.42
PKD1-217ENST00000483814 KDM4FA0A1W2PPD8 638 aa30.15■■■□□ 2.42
PKD1-217ENST00000483814 GPATCH8Q9UKJ3 1502 aaKnown RBP30.15■■■□□ 2.42
PKD1-217ENST00000483814 ZMYM4Q5VZL5 1548 aa30.14■■■□□ 2.42
PKD1-217ENST00000483814 CCNB3Q8WWL7 1395 aa30.14■■■□□ 2.41
PKD1-217ENST00000483814 SUPT6HQ7KZ85 1726 aaKnown RBP30.12■■■□□ 2.41
PKD1-217ENST00000483814 ARHGEF40Q8TER5 1519 aa30.12■■■□□ 2.41
PKD1-217ENST00000483814 ZNF777Q9ULD5 760 aaPredicted RBP30.11■■■□□ 2.41
PKD1-217ENST00000483814 ABCC1P33527 1531 aa30.11■■■□□ 2.41
PKD1-217ENST00000483814 ITSN2Q9NZM3 1697 aa30.09■■■□□ 2.41
PKD1-217ENST00000483814 ZFYVE16Q7Z3T8 1539 aa30.08■■■□□ 2.41
PKD1-217ENST00000483814 SAMD9LQ8IVG5 1584 aa30.07■■■□□ 2.4
PKD1-217ENST00000483814 ZNF518AQ6AHZ1 1483 aa30.07■■■□□ 2.4
PKD1-217ENST00000483814 LRRC9Q6ZRR7 1453 aa30.06■■■□□ 2.4
PKD1-217ENST00000483814 CFDP1Q9UEE9 299 aaPredicted RBP30.06■■■□□ 2.4
PKD1-217ENST00000483814 MAP3K1Q13233 1512 aa30.05■■■□□ 2.4
PKD1-217ENST00000483814 ARHGEF12Q9NZN5 1544 aa30.05■■■□□ 2.4
PKD1-217ENST00000483814 NCOA2Q15596 1464 aa30.05■■■□□ 2.4
PKD1-217ENST00000483814 MAGI2Q86UL8 1455 aa30.05■■■□□ 2.4
PKD1-217ENST00000483814 YEATS2Q9ULM3 1422 aa30.05■■■□□ 2.4
PKD1-217ENST00000483814 AFAP1Q8N556 730 aa30.04■■■□□ 2.4
PKD1-217ENST00000483814 KDM5CP41229 1560 aa30.02■■■□□ 2.4
PKD1-217ENST00000483814 APLP2Q06481 763 aa30.01■■■□□ 2.39
PKD1-217ENST00000483814 TRAPPC8Q9Y2L5 1435 aa30.01■■■□□ 2.39
PKD1-217ENST00000483814 KANK4Q5T7N3 995 aaPredicted RBP30■■■□□ 2.39
PKD1-217ENST00000483814 MYT1LQ9UL68 1186 aa30■■■□□ 2.39
PKD1-217ENST00000483814 SYCP2Q9BX26 1530 aa30■■■□□ 2.39
PKD1-217ENST00000483814 ARID4BQ4LE39 1312 aaPredicted RBP29.99■■■□□ 2.39
PKD1-217ENST00000483814 HECW2Q9P2P5 1572 aa29.98■■■□□ 2.39
PKD1-217ENST00000483814 HNRNPMP52272 730 aaKnown RBP eCLIP29.95■■■□□ 2.39
PKD1-217ENST00000483814 PLEKHH2Q8IVE3 1493 aa29.94■■■□□ 2.38
PKD1-217ENST00000483814 SIGLEC1Q9BZZ2 1709 aa29.93■■■□□ 2.38
PKD1-217ENST00000483814 BCORL1Q5H9F3 1711 aa29.92■■■□□ 2.38
PKD1-217ENST00000483814 ZNF644Q9H582 1327 aaPredicted RBP29.92■■■□□ 2.38
PKD1-217ENST00000483814 KIAA1107Q9UPP5 1409 aa29.9■■■□□ 2.38
PKD1-217ENST00000483814 ATP10AO60312 1499 aa29.9■■■□□ 2.38
PKD1-217ENST00000483814 MLH3Q9UHC1 1453 aa29.9■■■□□ 2.38
PKD1-217ENST00000483814 ABCA6Q8N139 1617 aa29.89■■■□□ 2.37
PKD1-217ENST00000483814 DIP2CQ9Y2E4 1556 aa29.88■■■□□ 2.37
PKD1-217ENST00000483814 ADAMTSL3P82987 1691 aa29.88■■■□□ 2.37
PKD1-217ENST00000483814 C9orf84Q5VXU9 1444 aa29.88■■■□□ 2.37
PKD1-217ENST00000483814 KIDINS220Q9ULH0 1771 aa29.87■■■□□ 2.37
PKD1-217ENST00000483814 CAMSAP2Q08AD1 1489 aa29.84■■■□□ 2.37
PKD1-217ENST00000483814 SPAG9O60271 1321 aaKnown RBP29.83■■■□□ 2.37
PKD1-217ENST00000483814 MADDQ8WXG6 1647 aa29.82■■■□□ 2.36
PKD1-217ENST00000483814 MBD5Q9P267 1494 aa29.8■■■□□ 2.36
PKD1-217ENST00000483814 MLECQ14165 292 aa29.79■■■□□ 2.36
PKD1-217ENST00000483814 ATP7AQ04656 1500 aa29.78■■■□□ 2.36
PKD1-217ENST00000483814 MYOM3Q5VTT5 1437 aa29.78■■■□□ 2.36
PKD1-217ENST00000483814 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
PKD1-217ENST00000483814 REREQ9P2R6 1566 aa29.76■■■□□ 2.35
PKD1-217ENST00000483814 RIMS1Q86UR5 1692 aaKnown RBP29.76■■■□□ 2.35
PKD1-217ENST00000483814 FER1L4A9Z1Z3 1794 aa29.73■■■□□ 2.35
PKD1-217ENST00000483814 CCDC141Q6ZP82 1450 aa29.72■■■□□ 2.35
PKD1-217ENST00000483814 PTPRMP28827 1452 aa29.71■■■□□ 2.35
PKD1-217ENST00000483814 MIA2Q96PC5 1412 aa29.71■■■□□ 2.35
PKD1-217ENST00000483814 ARHGEF5Q12774 1597 aa29.69■■■□□ 2.34
PKD1-217ENST00000483814 RSPH4AQ5TD94 716 aa29.66■■■□□ 2.34
PKD1-217ENST00000483814 ADGBQ8N7X0 1667 aa29.66■■■□□ 2.34
PKD1-217ENST00000483814 AGLP35573 1532 aa29.66■■■□□ 2.34
PKD1-217ENST00000483814 PTPN23Q9H3S7 1636 aa29.64■■■□□ 2.34
PKD1-217ENST00000483814 RTEL1-TNFRSF6BF6WH68 1400 aa29.63■■■□□ 2.33
PKD1-217ENST00000483814 A2MP01023 1474 aa29.62■■■□□ 2.33
PKD1-217ENST00000483814 PLPPR3Q6T4P5 718 aa29.62■■■□□ 2.33
PKD1-217ENST00000483814 TSPY4P0CV99 314 aa29.6■■■□□ 2.33
PKD1-217ENST00000483814 TSPY10P0CW01 314 aa29.6■■■□□ 2.33
PKD1-217ENST00000483814 FGD6Q6ZV73 1430 aa29.6■■■□□ 2.33
PKD1-217ENST00000483814 PLXNC1O60486 1568 aa29.6■■■□□ 2.33
PKD1-217ENST00000483814 MAST1Q9Y2H9 1570 aa29.53■■■□□ 2.32
PKD1-217ENST00000483814 PPARGC1BQ86YN6 1023 aaKnown RBP29.53■■■□□ 2.32
PKD1-217ENST00000483814 TCOF1Q13428 1488 aaKnown RBP29.52■■■□□ 2.32
PKD1-217ENST00000483814 CROCC2H7BZ55 1655 aa29.51■■■□□ 2.31
PKD1-217ENST00000483814 ESF1Q9H501 851 aaKnown RBP29.51■■■□□ 2.31
PKD1-217ENST00000483814 DHX29Q7Z478 1369 aaKnown RBP29.49■■■□□ 2.31
PKD1-217ENST00000483814 DNMT1P26358 1616 aaKnown RBP29.48■■■□□ 2.31
PKD1-217ENST00000483814 GGT6Q6P531 493 aa29.46■■■□□ 2.31
PKD1-217ENST00000483814 ABCC5O15440 1437 aa29.45■■■□□ 2.31
PKD1-217ENST00000483814 CEBPAP49715 358 aaPredicted RBP29.45■■■□□ 2.31
PKD1-217ENST00000483814 DAPK1P53355 1430 aa29.45■■■□□ 2.3
PKD1-217ENST00000483814 FAM50AQ14320 339 aaKnown RBP29.44■■■□□ 2.3
PKD1-217ENST00000483814 C3P01024 1663 aa29.44■■■□□ 2.3
PKD1-217ENST00000483814 CLTCQ00610 1675 aaKnown RBP29.42■■■□□ 2.3
PKD1-217ENST00000483814 SHANK2Q9UPX8 1470 aa29.42■■■□□ 2.3
PKD1-217ENST00000483814 KIF3BO15066 747 aa29.41■■■□□ 2.3
PKD1-217ENST00000483814 CNTLNQ9NXG0 1405 aa29.41■■■□□ 2.3
PKD1-217ENST00000483814 MROH2AA6NES4 1674 aa29.38■■■□□ 2.29
PKD1-217ENST00000483814 CHIC2Q9UKJ5 165 aa29.35■■■□□ 2.29
PKD1-217ENST00000483814 LMTK3Q96Q04 1460 aa29.33■■■□□ 2.29
PKD1-217ENST00000483814 DUOX2Q9NRD8 1548 aa29.33■■■□□ 2.29
PKD1-217ENST00000483814 PREX1Q8TCU6 1659 aa29.32■■■□□ 2.28
PKD1-217ENST00000483814 KIF15Q9NS87 1388 aa29.32■■■□□ 2.28
PKD1-217ENST00000483814 RRP7BPQ9NSQ0 103 aa29.32■■■□□ 2.28
PKD1-217ENST00000483814 EIF2AK4Q9P2K8 1649 aaKnown RBP29.31■■■□□ 2.28
PKD1-217ENST00000483814 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms