RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 ZNF644Q9H582 1327 aaPredicted RBP25.83■■□□□ 1.73
MRPL28-210ENST00000483764 PLCH2O75038 1416 aa25.83■■□□□ 1.73
MRPL28-210ENST00000483764 ABCA9Q8IUA7 1624 aa25.82■■□□□ 1.72
MRPL28-210ENST00000483764 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
MRPL28-210ENST00000483764 MYO5CQ9NQX4 1742 aa25.79■■□□□ 1.72
MRPL28-210ENST00000483764 ARHGAP5Q13017 1502 aa25.78■■□□□ 1.72
MRPL28-210ENST00000483764 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
MRPL28-210ENST00000483764 CDC42BPBQ9Y5S2 1711 aa25.78■■□□□ 1.72
MRPL28-210ENST00000483764 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
MRPL28-210ENST00000483764 ARAP3Q8WWN8 1544 aa25.74■■□□□ 1.71
MRPL28-210ENST00000483764 CD109Q6YHK3 1445 aa25.73■■□□□ 1.71
MRPL28-210ENST00000483764 FAM69CQ0P6D2 419 aa25.71■■□□□ 1.71
MRPL28-210ENST00000483764 GLI2P10070 1586 aa25.71■■□□□ 1.71
MRPL28-210ENST00000483764 SAMD9LQ8IVG5 1584 aa25.69■■□□□ 1.7
MRPL28-210ENST00000483764 PTPRKQ15262 1439 aa25.69■■□□□ 1.7
MRPL28-210ENST00000483764 ABCC5O15440 1437 aa25.67■■□□□ 1.7
MRPL28-210ENST00000483764 DAPK1P53355 1430 aa25.67■■□□□ 1.7
MRPL28-210ENST00000483764 PLEKHH2Q8IVE3 1493 aa25.67■■□□□ 1.7
MRPL28-210ENST00000483764 HNRNPMP52272 730 aaKnown RBP eCLIP25.67■■□□□ 1.73e-8■■■□□ 15.8
MRPL28-210ENST00000483764 DIP2BQ9P265 1576 aa25.66■■□□□ 1.7
MRPL28-210ENST00000483764 FANCAO15360 1455 aa25.66■■□□□ 1.7
MRPL28-210ENST00000483764 KIAA1107Q9UPP5 1409 aa25.65■■□□□ 1.7
MRPL28-210ENST00000483764 DNMT1P26358 1616 aaKnown RBP25.65■■□□□ 1.7
MRPL28-210ENST00000483764 RSPH4AQ5TD94 716 aa25.64■■□□□ 1.7
MRPL28-210ENST00000483764 MBD5Q9P267 1494 aa25.64■■□□□ 1.7
MRPL28-210ENST00000483764 CHIC2Q9UKJ5 165 aa25.63■■□□□ 1.69
MRPL28-210ENST00000483764 MAP3K4Q9Y6R4 1608 aa25.61■■□□□ 1.69
MRPL28-210ENST00000483764 SYCP2Q9BX26 1530 aa25.6■■□□□ 1.69
MRPL28-210ENST00000483764 ARHGEF5Q12774 1597 aa25.6■■□□□ 1.69
MRPL28-210ENST00000483764 TSPY4P0CV99 314 aa25.58■■□□□ 1.69
MRPL28-210ENST00000483764 TSPY10P0CW01 314 aa25.58■■□□□ 1.69
MRPL28-210ENST00000483764 ABCC1P33527 1531 aa25.58■■□□□ 1.68
MRPL28-210ENST00000483764 ARHGEF12Q9NZN5 1544 aa25.58■■□□□ 1.68
MRPL28-210ENST00000483764 AKNAQ7Z591 1439 aa25.58■■□□□ 1.68
MRPL28-210ENST00000483764 CCDC141Q6ZP82 1450 aa25.57■■□□□ 1.68
MRPL28-210ENST00000483764 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
MRPL28-210ENST00000483764 ROCK1Q13464 1354 aa25.54■■□□□ 1.68
MRPL28-210ENST00000483764 ADGRL1O94910 1474 aa25.54■■□□□ 1.68
MRPL28-210ENST00000483764 NEO1Q92859 1461 aa25.54■■□□□ 1.68
MRPL28-210ENST00000483764 CFAP74Q9C0B2 1584 aa25.54■■□□□ 1.68
MRPL28-210ENST00000483764 RRP7BPQ9NSQ0 103 aa25.53■■□□□ 1.68
MRPL28-210ENST00000483764 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
MRPL28-210ENST00000483764 SCAPERQ9BY12 1400 aa25.53■■□□□ 1.68
MRPL28-210ENST00000483764 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
MRPL28-210ENST00000483764 C9orf84Q5VXU9 1444 aa25.52■■□□□ 1.68
MRPL28-210ENST00000483764 TRAPPC8Q9Y2L5 1435 aa25.51■■□□□ 1.67
MRPL28-210ENST00000483764 CROCC2H7BZ55 1655 aa25.51■■□□□ 1.67
MRPL28-210ENST00000483764 KIF13AQ9H1H9 1805 aa25.5■■□□□ 1.67
MRPL28-210ENST00000483764 NAIPQ13075 1403 aa25.49■■□□□ 1.67
MRPL28-210ENST00000483764 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
MRPL28-210ENST00000483764 AFAP1Q8N556 730 aa25.48■■□□□ 1.67
MRPL28-210ENST00000483764 ANKRD30AQ9BXX3 1397 aa25.48■■□□□ 1.67
MRPL28-210ENST00000483764 RAB3GAP2Q9H2M9 1393 aa25.48■■□□□ 1.67
MRPL28-210ENST00000483764 ADGRL2O95490 1459 aa25.48■■□□□ 1.67
MRPL28-210ENST00000483764 TEX14Q8IWB6 1497 aa25.46■■□□□ 1.67
MRPL28-210ENST00000483764 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
MRPL28-210ENST00000483764 MAST1Q9Y2H9 1570 aa25.43■■□□□ 1.66
MRPL28-210ENST00000483764 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
MRPL28-210ENST00000483764 TRHP20396 242 aaPredicted RBP25.42■■□□□ 1.66
MRPL28-210ENST00000483764 PPRC1Q5VV67 1664 aaKnown RBP25.41■■□□□ 1.66
MRPL28-210ENST00000483764 TSPOAP1O95153 1857 aa25.41■■□□□ 1.66
MRPL28-210ENST00000483764 ZNF518AQ6AHZ1 1483 aa25.4■■□□□ 1.66
MRPL28-210ENST00000483764 RTEL1-TNFRSF6BF6WH68 1400 aa25.39■■□□□ 1.65
MRPL28-210ENST00000483764 POGZQ7Z3K3 1410 aa25.39■■□□□ 1.65
MRPL28-210ENST00000483764 DENND4BO75064 1496 aaPredicted RBP25.39■■□□□ 1.65
MRPL28-210ENST00000483764 GCC2Q8IWJ2 1684 aa25.38■■□□□ 1.65
MRPL28-210ENST00000483764 KIF15Q9NS87 1388 aa25.37■■□□□ 1.65
MRPL28-210ENST00000483764 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
MRPL28-210ENST00000483764 RAPGEF3O95398 923 aa25.35■■□□□ 1.65
MRPL28-210ENST00000483764 MYT1LQ9UL68 1186 aa25.33■■□□□ 1.65
MRPL28-210ENST00000483764 ANKRD50Q9ULJ7 1429 aa25.32■■□□□ 1.64
MRPL28-210ENST00000483764 PLXNC1O60486 1568 aa25.32■■□□□ 1.64
MRPL28-210ENST00000483764 ZFYVE16Q7Z3T8 1539 aa25.32■■□□□ 1.64
MRPL28-210ENST00000483764 KDM5CP41229 1560 aa25.31■■□□□ 1.64
MRPL28-210ENST00000483764 ATP7AQ04656 1500 aa25.3■■□□□ 1.64
MRPL28-210ENST00000483764 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
MRPL28-210ENST00000483764 KDM6BO15054 1643 aa25.3■■□□□ 1.64
MRPL28-210ENST00000483764 INO80Q9ULG1 1556 aaPredicted RBP25.29■■□□□ 1.64
MRPL28-210ENST00000483764 MLH3Q9UHC1 1453 aa25.29■■□□□ 1.64
MRPL28-210ENST00000483764 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
MRPL28-210ENST00000483764 DUOX2Q9NRD8 1548 aa25.26■■□□□ 1.63
MRPL28-210ENST00000483764 RICTORQ6R327 1708 aa25.25■■□□□ 1.63
MRPL28-210ENST00000483764 TRIM52Q96A61 297 aa25.24■■□□□ 1.63
MRPL28-210ENST00000483764 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
MRPL28-210ENST00000483764 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
MRPL28-210ENST00000483764 COL17A1Q9UMD9 1497 aaPredicted RBP25.22■■□□□ 1.63
MRPL28-210ENST00000483764 FRMPD1Q5SYB0 1578 aa25.21■■□□□ 1.63
MRPL28-210ENST00000483764 ERBINQ96RT1 1412 aa25.2■■□□□ 1.62
MRPL28-210ENST00000483764 DHX29Q7Z478 1369 aaKnown RBP25.19■■□□□ 1.62
MRPL28-210ENST00000483764 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
MRPL28-210ENST00000483764 MAGI2Q86UL8 1455 aa25.16■■□□□ 1.62
MRPL28-210ENST00000483764 A2MP01023 1474 aa25.14■■□□□ 1.61
MRPL28-210ENST00000483764 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
MRPL28-210ENST00000483764 YEATS2Q9ULM3 1422 aa25.12■■□□□ 1.61
MRPL28-210ENST00000483764 NUP155O75694 1391 aa25.12■■□□□ 1.61
MRPL28-210ENST00000483764 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
MRPL28-210ENST00000483764 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
MRPL28-210ENST00000483764 DIP2CQ9Y2E4 1556 aa25.1■■□□□ 1.61
MRPL28-210ENST00000483764 KIF3BO15066 747 aa25.08■■□□□ 1.61
MRPL28-210ENST00000483764 SLC4A1APQ9BWU0 796 aaKnown RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms