RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ADCY10Q96PN6 1610 aa13□□□□□ -0.33
CDC42SE1-204ENST00000483763 CFDP1Q9UEE9 299 aaPredicted RBP12.99□□□□□ -0.33
CDC42SE1-204ENST00000483763 FAM69CQ0P6D2 419 aa12.99□□□□□ -0.33
CDC42SE1-204ENST00000483763 ABCC5O15440 1437 aa12.97□□□□□ -0.33
CDC42SE1-204ENST00000483763 SIN3AQ96ST3 1273 aa12.97□□□□□ -0.33
CDC42SE1-204ENST00000483763 ZNF777Q9ULD5 760 aaPredicted RBP12.97□□□□□ -0.33
CDC42SE1-204ENST00000483763 ABCC10Q5T3U5 1492 aa12.97□□□□□ -0.33
CDC42SE1-204ENST00000483763 KCNH8Q96L42 1107 aa12.96□□□□□ -0.33
CDC42SE1-204ENST00000483763 ABCC2Q92887 1545 aa12.96□□□□□ -0.33
CDC42SE1-204ENST00000483763 DAPK1P53355 1430 aa12.96□□□□□ -0.33
CDC42SE1-204ENST00000483763 CAMSAP2Q08AD1 1489 aa12.94□□□□□ -0.34
CDC42SE1-204ENST00000483763 KDM6BO15054 1643 aa12.94□□□□□ -0.34
CDC42SE1-204ENST00000483763 ZNF316A6NFI3 1004 aaPredicted RBP12.92□□□□□ -0.34
CDC42SE1-204ENST00000483763 NEUROD1Q13562 356 aa12.92□□□□□ -0.34
CDC42SE1-204ENST00000483763 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
CDC42SE1-204ENST00000483763 AKNAQ7Z591 1439 aa12.91□□□□□ -0.34
CDC42SE1-204ENST00000483763 CDC42BPAQ5VT25 1732 aa12.91□□□□□ -0.34
CDC42SE1-204ENST00000483763 UHRF1BP1LA0JNW5 1464 aa12.9□□□□□ -0.34
CDC42SE1-204ENST00000483763 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
CDC42SE1-204ENST00000483763 ITSN2Q9NZM3 1697 aa12.9□□□□□ -0.34
CDC42SE1-204ENST00000483763 ROCK1Q13464 1354 aa12.89□□□□□ -0.35
CDC42SE1-204ENST00000483763 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
CDC42SE1-204ENST00000483763 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
CDC42SE1-204ENST00000483763 GCC2Q8IWJ2 1684 aa12.88□□□□□ -0.35
CDC42SE1-204ENST00000483763 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
CDC42SE1-204ENST00000483763 DIEXFQ68CQ4 756 aaKnown RBP12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 KDM5BQ9UGL1 1544 aa12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 HNRNPMP52272 730 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 NCOA1Q15788 1441 aa12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
CDC42SE1-204ENST00000483763 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.85□□□□□ -0.354e-7■■□□□ 13.5
CDC42SE1-204ENST00000483763 TTC37Q6PGP7 1564 aa12.85□□□□□ -0.35
CDC42SE1-204ENST00000483763 PLPPR3Q6T4P5 718 aa12.85□□□□□ -0.35
CDC42SE1-204ENST00000483763 FOXD1Q16676 465 aa12.84□□□□□ -0.35
CDC42SE1-204ENST00000483763 MPHOSPH9Q99550 1183 aa12.84□□□□□ -0.35
CDC42SE1-204ENST00000483763 MBD5Q9P267 1494 aa12.84□□□□□ -0.35
CDC42SE1-204ENST00000483763 CDC42BPBQ9Y5S2 1711 aa12.83□□□□□ -0.36
CDC42SE1-204ENST00000483763 SAMD9LQ8IVG5 1584 aa12.82□□□□□ -0.36
CDC42SE1-204ENST00000483763 ADGRL2O95490 1459 aa12.81□□□□□ -0.36
CDC42SE1-204ENST00000483763 PREX2Q70Z35 1606 aa12.81□□□□□ -0.36
CDC42SE1-204ENST00000483763 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
CDC42SE1-204ENST00000483763 CROCC2H7BZ55 1655 aa12.8□□□□□ -0.36
CDC42SE1-204ENST00000483763 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 PPP1R15AO75807 674 aaPredicted RBP12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 ARHGAP5Q13017 1502 aa12.79□□□□□ -0.36
CDC42SE1-204ENST00000483763 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
CDC42SE1-204ENST00000483763 ANKRD50Q9ULJ7 1429 aa12.77□□□□□ -0.36
CDC42SE1-204ENST00000483763 PLCH2O75038 1416 aa12.77□□□□□ -0.37
CDC42SE1-204ENST00000483763 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
CDC42SE1-204ENST00000483763 SHANK2Q9UPX8 1470 aa12.77□□□□□ -0.37
CDC42SE1-204ENST00000483763 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
CDC42SE1-204ENST00000483763 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
CDC42SE1-204ENST00000483763 ARHGEF12Q9NZN5 1544 aa12.76□□□□□ -0.37
CDC42SE1-204ENST00000483763 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
CDC42SE1-204ENST00000483763 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
CDC42SE1-204ENST00000483763 MYO5CQ9NQX4 1742 aa12.75□□□□□ -0.37
CDC42SE1-204ENST00000483763 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
CDC42SE1-204ENST00000483763 PZPP20742 1482 aa12.75□□□□□ -0.37
CDC42SE1-204ENST00000483763 KIF15Q9NS87 1388 aa12.74□□□□□ -0.37
CDC42SE1-204ENST00000483763 ANKRD30BQ9BXX2 1392 aa12.74□□□□□ -0.37
CDC42SE1-204ENST00000483763 RSPH4AQ5TD94 716 aa12.73□□□□□ -0.37
CDC42SE1-204ENST00000483763 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
CDC42SE1-204ENST00000483763 EFCAB2Q5VUJ9 269 aa12.72□□□□□ -0.37
CDC42SE1-204ENST00000483763 COL17A1Q9UMD9 1497 aaPredicted RBP12.71□□□□□ -0.38
CDC42SE1-204ENST00000483763 MIER1Q8N108 512 aa12.7□□□□□ -0.38
CDC42SE1-204ENST00000483763 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
CDC42SE1-204ENST00000483763 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
CDC42SE1-204ENST00000483763 NUP155O75694 1391 aa12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 ACIN1Q9UKV3 1341 aaKnown RBP12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 PKD2Q13563 968 aa12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 AFAP1Q8N556 730 aa12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 L3MBTL2Q969R5 705 aa12.69□□□□□ -0.38
CDC42SE1-204ENST00000483763 PPRC1Q5VV67 1664 aaKnown RBP12.68□□□□□ -0.38
CDC42SE1-204ENST00000483763 PLEKHH2Q8IVE3 1493 aa12.68□□□□□ -0.38
CDC42SE1-204ENST00000483763 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
CDC42SE1-204ENST00000483763 ABCC1P33527 1531 aa12.67□□□□□ -0.38
CDC42SE1-204ENST00000483763 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
CDC42SE1-204ENST00000483763 RPRD2Q5VT52 1461 aaKnown RBP12.66□□□□□ -0.38
CDC42SE1-204ENST00000483763 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
CDC42SE1-204ENST00000483763 FANCAO15360 1455 aa12.65□□□□□ -0.39
CDC42SE1-204ENST00000483763 ARAP3Q8WWN8 1544 aa12.64□□□□□ -0.39
CDC42SE1-204ENST00000483763 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
CDC42SE1-204ENST00000483763 RTN4Q9NQC3 1192 aaKnown RBP12.63□□□□□ -0.39
CDC42SE1-204ENST00000483763 GLI2P10070 1586 aa12.62□□□□□ -0.39
CDC42SE1-204ENST00000483763 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
CDC42SE1-204ENST00000483763 KDM5DQ9BY66 1539 aa12.62□□□□□ -0.39
CDC42SE1-204ENST00000483763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.62□□□□□ -0.394e-8■■□□□ 14.5
CDC42SE1-204ENST00000483763 PLXNC1O60486 1568 aa12.61□□□□□ -0.39
CDC42SE1-204ENST00000483763 NBPF8Q3BBV2 869 aa12.61□□□□□ -0.39
CDC42SE1-204ENST00000483763 SPAG9O60271 1321 aaKnown RBP12.61□□□□□ -0.39
CDC42SE1-204ENST00000483763 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
CDC42SE1-204ENST00000483763 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
CDC42SE1-204ENST00000483763 ADGRL1O94910 1474 aa12.59□□□□□ -0.39
CDC42SE1-204ENST00000483763 MYT1LQ9UL68 1186 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms