RNA–Protein interactions for RNA: ENST00000483440.1

VEPH1-213, Transcript of ventricular zone expressed PH domain containing 1, humanhuman

TSL 2

Gene VEPH1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEPH1-213ENST00000483440 ARID3CA6NKF2 412 aa13.43□□□□□ -0.26
VEPH1-213ENST00000483440 FMN1Q68DA7 1419 aa13.41□□□□□ -0.26
VEPH1-213ENST00000483440 PLEKHD1A6NEE1 506 aa13.4□□□□□ -0.26
VEPH1-213ENST00000483440 PHLDB1Q86UU1 1377 aa13.4□□□□□ -0.26
VEPH1-213ENST00000483440 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
VEPH1-213ENST00000483440 ABCA9Q8IUA7 1624 aa13.37□□□□□ -0.27
VEPH1-213ENST00000483440 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
VEPH1-213ENST00000483440 HECW1Q76N89 1606 aa13.35□□□□□ -0.27
VEPH1-213ENST00000483440 ATP1B4Q9UN42 357 aaPredicted RBP13.34□□□□□ -0.27
VEPH1-213ENST00000483440 NEO1Q92859 1461 aa13.33□□□□□ -0.28
VEPH1-213ENST00000483440 ARAP3Q8WWN8 1544 aa13.32□□□□□ -0.28
VEPH1-213ENST00000483440 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
VEPH1-213ENST00000483440 ARHGAP35Q9NRY4 1499 aa13.31□□□□□ -0.28
VEPH1-213ENST00000483440 COL17A1Q9UMD9 1497 aaPredicted RBP13.31□□□□□ -0.28
VEPH1-213ENST00000483440 CLIP1P30622 1438 aa13.29□□□□□ -0.28
VEPH1-213ENST00000483440 ADGRL1O94910 1474 aa13.27□□□□□ -0.29
VEPH1-213ENST00000483440 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
VEPH1-213ENST00000483440 CCDC18Q5T9S5 1454 aa13.26□□□□□ -0.29
VEPH1-213ENST00000483440 FANCAO15360 1455 aa13.25□□□□□ -0.29
VEPH1-213ENST00000483440 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
VEPH1-213ENST00000483440 KIF14Q15058 1648 aa13.24□□□□□ -0.29
VEPH1-213ENST00000483440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.24□□□□□ -0.29
VEPH1-213ENST00000483440 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
VEPH1-213ENST00000483440 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
VEPH1-213ENST00000483440 CASKIN1Q8WXD9 1431 aa13.22□□□□□ -0.29
VEPH1-213ENST00000483440 TROQ12816 1431 aaPredicted RBP13.22□□□□□ -0.29
VEPH1-213ENST00000483440 TTC37Q6PGP7 1564 aa13.21□□□□□ -0.29
VEPH1-213ENST00000483440 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
VEPH1-213ENST00000483440 FYCO1Q9BQS8 1478 aa13.21□□□□□ -0.3
VEPH1-213ENST00000483440 RAPGEF3O95398 923 aa13.2□□□□□ -0.3
VEPH1-213ENST00000483440 PLCH2O75038 1416 aa13.2□□□□□ -0.3
VEPH1-213ENST00000483440 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
VEPH1-213ENST00000483440 ZBTB12Q9Y330 459 aaPredicted RBP13.19□□□□□ -0.3
VEPH1-213ENST00000483440 PCF11O94913 1555 aaKnown RBP13.19□□□□□ -0.3
VEPH1-213ENST00000483440 MYO5CQ9NQX4 1742 aa13.19□□□□□ -0.3
VEPH1-213ENST00000483440 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
VEPH1-213ENST00000483440 MAGI2Q86UL8 1455 aa13.16□□□□□ -0.3
VEPH1-213ENST00000483440 POGZQ7Z3K3 1410 aa13.16□□□□□ -0.3
VEPH1-213ENST00000483440 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
VEPH1-213ENST00000483440 ARHGEF40Q8TER5 1519 aa13.16□□□□□ -0.3
VEPH1-213ENST00000483440 FRMPD1Q5SYB0 1578 aa13.15□□□□□ -0.3
VEPH1-213ENST00000483440 SCAPERQ9BY12 1400 aa13.14□□□□□ -0.31
VEPH1-213ENST00000483440 ZMYM4Q5VZL5 1548 aa13.14□□□□□ -0.31
VEPH1-213ENST00000483440 RICTORQ6R327 1708 aa13.14□□□□□ -0.31
VEPH1-213ENST00000483440 ZFYVE16Q7Z3T8 1539 aa13.13□□□□□ -0.31
VEPH1-213ENST00000483440 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
VEPH1-213ENST00000483440 MYT1LQ9UL68 1186 aa13.11□□□□□ -0.31
VEPH1-213ENST00000483440 CEP162Q5TB80 1403 aa13.1□□□□□ -0.31
VEPH1-213ENST00000483440 LRRIQ1Q96JM4 1722 aa13.1□□□□□ -0.31
VEPH1-213ENST00000483440 MTUS2Q5JR59 1369 aa13.09□□□□□ -0.31
VEPH1-213ENST00000483440 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
VEPH1-213ENST00000483440 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
VEPH1-213ENST00000483440 C9orf84Q5VXU9 1444 aa13.06□□□□□ -0.32
VEPH1-213ENST00000483440 ADAMTSL3P82987 1691 aa13.05□□□□□ -0.32
VEPH1-213ENST00000483440 ATP10AO60312 1499 aa13.05□□□□□ -0.32
VEPH1-213ENST00000483440 CCNB3Q8WWL7 1395 aa13.05□□□□□ -0.32
VEPH1-213ENST00000483440 PTPRMP28827 1452 aa13.04□□□□□ -0.32
VEPH1-213ENST00000483440 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
VEPH1-213ENST00000483440 HECW2Q9P2P5 1572 aa13.04□□□□□ -0.32
VEPH1-213ENST00000483440 YEATS2Q9ULM3 1422 aa13.04□□□□□ -0.32
VEPH1-213ENST00000483440 ABCC1P33527 1531 aa13.03□□□□□ -0.32
VEPH1-213ENST00000483440 EHBP1L1Q8N3D4 1523 aa13.03□□□□□ -0.32
VEPH1-213ENST00000483440 KDM5CP41229 1560 aa13.03□□□□□ -0.32
VEPH1-213ENST00000483440 CDC42BPBQ9Y5S2 1711 aa13.03□□□□□ -0.32
VEPH1-213ENST00000483440 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.33
VEPH1-213ENST00000483440 ZNF777Q9ULD5 760 aaPredicted RBP13.02□□□□□ -0.33
VEPH1-213ENST00000483440 MADDQ8WXG6 1647 aa13.02□□□□□ -0.33
VEPH1-213ENST00000483440 MLH3Q9UHC1 1453 aa13.01□□□□□ -0.33
VEPH1-213ENST00000483440 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
VEPH1-213ENST00000483440 ITSN2Q9NZM3 1697 aa13□□□□□ -0.33
VEPH1-213ENST00000483440 AFAP1Q8N556 730 aa13□□□□□ -0.33
VEPH1-213ENST00000483440 ESF1Q9H501 851 aaKnown RBP13□□□□□ -0.33
VEPH1-213ENST00000483440 MLECQ14165 292 aa12.99□□□□□ -0.33
VEPH1-213ENST00000483440 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
VEPH1-213ENST00000483440 REREQ9P2R6 1566 aa12.98□□□□□ -0.33
VEPH1-213ENST00000483440 GPATCH8Q9UKJ3 1502 aaKnown RBP12.98□□□□□ -0.33
VEPH1-213ENST00000483440 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
VEPH1-213ENST00000483440 KIAA1107Q9UPP5 1409 aa12.97□□□□□ -0.33
VEPH1-213ENST00000483440 FER1L4A9Z1Z3 1794 aa12.97□□□□□ -0.33
VEPH1-213ENST00000483440 SPAG9O60271 1321 aaKnown RBP12.96□□□□□ -0.33
VEPH1-213ENST00000483440 DIP2CQ9Y2E4 1556 aa12.96□□□□□ -0.33
VEPH1-213ENST00000483440 SYCP2Q9BX26 1530 aa12.96□□□□□ -0.33
VEPH1-213ENST00000483440 SUPT6HQ7KZ85 1726 aaKnown RBP12.96□□□□□ -0.34
VEPH1-213ENST00000483440 TRAPPC8Q9Y2L5 1435 aa12.96□□□□□ -0.34
VEPH1-213ENST00000483440 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
VEPH1-213ENST00000483440 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
VEPH1-213ENST00000483440 TIAM1Q13009 1591 aa12.94□□□□□ -0.34
VEPH1-213ENST00000483440 AGLP35573 1532 aa12.93□□□□□ -0.34
VEPH1-213ENST00000483440 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
VEPH1-213ENST00000483440 FKBP8Q14318 412 aa12.93□□□□□ -0.34
VEPH1-213ENST00000483440 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
VEPH1-213ENST00000483440 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
VEPH1-213ENST00000483440 HNRNPMP52272 730 aaKnown RBP eCLIP12.91□□□□□ -0.34
VEPH1-213ENST00000483440 RSPH4AQ5TD94 716 aa12.91□□□□□ -0.34
VEPH1-213ENST00000483440 ATP7AQ04656 1500 aa12.91□□□□□ -0.34
VEPH1-213ENST00000483440 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
VEPH1-213ENST00000483440 MAP3K1Q13233 1512 aa12.9□□□□□ -0.34
VEPH1-213ENST00000483440 SIGLEC1Q9BZZ2 1709 aa12.9□□□□□ -0.34
VEPH1-213ENST00000483440 KIDINS220Q9ULH0 1771 aa12.89□□□□□ -0.35
VEPH1-213ENST00000483440 SPDYE4A6NLX3 237 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms