RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 CDC42BPBQ9Y5S2 1711 aa25.65■■□□□ 1.7
COL2A1-206ENST00000483376 DENND4BO75064 1496 aaPredicted RBP25.65■■□□□ 1.7
COL2A1-206ENST00000483376 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
COL2A1-206ENST00000483376 ADGRL1O94910 1474 aa25.64■■□□□ 1.69
COL2A1-206ENST00000483376 FRMPD1Q5SYB0 1578 aa25.61■■□□□ 1.69
COL2A1-206ENST00000483376 CCNB3Q8WWL7 1395 aa25.61■■□□□ 1.69
COL2A1-206ENST00000483376 SUPT6HQ7KZ85 1726 aaKnown RBP25.61■■□□□ 1.69
COL2A1-206ENST00000483376 NCOA2Q15596 1464 aa25.6■■□□□ 1.69
COL2A1-206ENST00000483376 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
COL2A1-206ENST00000483376 RICTORQ6R327 1708 aa25.59■■□□□ 1.69
COL2A1-206ENST00000483376 POGZQ7Z3K3 1410 aa25.58■■□□□ 1.69
COL2A1-206ENST00000483376 APLP2Q06481 763 aa25.58■■□□□ 1.69
COL2A1-206ENST00000483376 ZMYM4Q5VZL5 1548 aa25.58■■□□□ 1.68
COL2A1-206ENST00000483376 RAPGEF3O95398 923 aa25.57■■□□□ 1.68
COL2A1-206ENST00000483376 KANK4Q5T7N3 995 aaPredicted RBP25.56■■□□□ 1.68
COL2A1-206ENST00000483376 ABCC1P33527 1531 aa25.56■■□□□ 1.68
COL2A1-206ENST00000483376 ITSN2Q9NZM3 1697 aa25.55■■□□□ 1.68
COL2A1-206ENST00000483376 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
COL2A1-206ENST00000483376 MAGI2Q86UL8 1455 aa25.53■■□□□ 1.68
COL2A1-206ENST00000483376 CFDP1Q9UEE9 299 aaPredicted RBP25.53■■□□□ 1.68
COL2A1-206ENST00000483376 KIAA1107Q9UPP5 1409 aa25.53■■□□□ 1.68
COL2A1-206ENST00000483376 PLEKHH2Q8IVE3 1493 aa25.53■■□□□ 1.68
COL2A1-206ENST00000483376 KDM5CP41229 1560 aa25.5■■□□□ 1.67
COL2A1-206ENST00000483376 SAMD9LQ8IVG5 1584 aa25.5■■□□□ 1.67
COL2A1-206ENST00000483376 ARHGEF12Q9NZN5 1544 aa25.48■■□□□ 1.67
COL2A1-206ENST00000483376 ARHGEF40Q8TER5 1519 aa25.46■■□□□ 1.67
COL2A1-206ENST00000483376 MIA2Q96PC5 1412 aa25.44■■□□□ 1.66
COL2A1-206ENST00000483376 MLH3Q9UHC1 1453 aa25.43■■□□□ 1.66
COL2A1-206ENST00000483376 TRAPPC8Q9Y2L5 1435 aa25.43■■□□□ 1.66
COL2A1-206ENST00000483376 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
COL2A1-206ENST00000483376 SYCP2Q9BX26 1530 aa25.42■■□□□ 1.66
COL2A1-206ENST00000483376 ZNF777Q9ULD5 760 aaPredicted RBP25.41■■□□□ 1.66
COL2A1-206ENST00000483376 ZFYVE16Q7Z3T8 1539 aa25.41■■□□□ 1.66
COL2A1-206ENST00000483376 AFAP1Q8N556 730 aa25.4■■□□□ 1.66
COL2A1-206ENST00000483376 MBD5Q9P267 1494 aa25.39■■□□□ 1.65
COL2A1-206ENST00000483376 HECW2Q9P2P5 1572 aa25.38■■□□□ 1.65
COL2A1-206ENST00000483376 YEATS2Q9ULM3 1422 aa25.37■■□□□ 1.65
COL2A1-206ENST00000483376 CAMSAP2Q08AD1 1489 aa25.36■■□□□ 1.65
COL2A1-206ENST00000483376 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
COL2A1-206ENST00000483376 ZNF644Q9H582 1327 aaPredicted RBP25.35■■□□□ 1.65
COL2A1-206ENST00000483376 HNRNPMP52272 730 aaKnown RBP eCLIP25.34■■□□□ 1.65
COL2A1-206ENST00000483376 ATP10AO60312 1499 aa25.32■■□□□ 1.64
COL2A1-206ENST00000483376 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
COL2A1-206ENST00000483376 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
COL2A1-206ENST00000483376 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
COL2A1-206ENST00000483376 CCDC141Q6ZP82 1450 aa25.29■■□□□ 1.64
COL2A1-206ENST00000483376 RTEL1-TNFRSF6BF6WH68 1400 aa25.29■■□□□ 1.64
COL2A1-206ENST00000483376 KIDINS220Q9ULH0 1771 aa25.28■■□□□ 1.64
COL2A1-206ENST00000483376 INO80Q9ULG1 1556 aaPredicted RBP25.28■■□□□ 1.64
COL2A1-206ENST00000483376 DIP2CQ9Y2E4 1556 aa25.28■■□□□ 1.64
COL2A1-206ENST00000483376 SPAG9O60271 1321 aaKnown RBP25.28■■□□□ 1.64
COL2A1-206ENST00000483376 FGD6Q6ZV73 1430 aa25.28■■□□□ 1.64
COL2A1-206ENST00000483376 TCOF1Q13428 1488 aaKnown RBP25.27■■□□□ 1.64
COL2A1-206ENST00000483376 KDM4FA0A1W2PPD8 638 aa25.26■■□□□ 1.63
COL2A1-206ENST00000483376 ATP7AQ04656 1500 aa25.26■■□□□ 1.63
COL2A1-206ENST00000483376 ABCA6Q8N139 1617 aa25.25■■□□□ 1.63
COL2A1-206ENST00000483376 PTPN23Q9H3S7 1636 aa25.23■■□□□ 1.63
COL2A1-206ENST00000483376 AGLP35573 1532 aa25.21■■□□□ 1.63
COL2A1-206ENST00000483376 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
COL2A1-206ENST00000483376 BCORL1Q5H9F3 1711 aa25.18■■□□□ 1.62
COL2A1-206ENST00000483376 SIGLEC1Q9BZZ2 1709 aa25.18■■□□□ 1.62
COL2A1-206ENST00000483376 MYT1LQ9UL68 1186 aa25.18■■□□□ 1.62
COL2A1-206ENST00000483376 ADAMTSL3P82987 1691 aa25.17■■□□□ 1.62
COL2A1-206ENST00000483376 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
COL2A1-206ENST00000483376 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
COL2A1-206ENST00000483376 SHANK2Q9UPX8 1470 aa25.15■■□□□ 1.62
COL2A1-206ENST00000483376 ARID4BQ4LE39 1312 aaPredicted RBP25.15■■□□□ 1.62
COL2A1-206ENST00000483376 PLXNC1O60486 1568 aa25.15■■□□□ 1.62
COL2A1-206ENST00000483376 A2MP01023 1474 aa25.13■■□□□ 1.61
COL2A1-206ENST00000483376 ADGBQ8N7X0 1667 aa25.12■■□□□ 1.61
COL2A1-206ENST00000483376 ABCC5O15440 1437 aa25.12■■□□□ 1.61
COL2A1-206ENST00000483376 DNMT1P26358 1616 aaKnown RBP25.11■■□□□ 1.61
COL2A1-206ENST00000483376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.1■■□□□ 1.61
COL2A1-206ENST00000483376 DAPK1P53355 1430 aa25.1■■□□□ 1.61
COL2A1-206ENST00000483376 DHX29Q7Z478 1369 aaKnown RBP25.08■■□□□ 1.61
COL2A1-206ENST00000483376 CROCC2H7BZ55 1655 aa25.07■■□□□ 1.6
COL2A1-206ENST00000483376 AEBP2Q6ZN18 517 aaPredicted RBP25.05■■□□□ 1.6
COL2A1-206ENST00000483376 MADDQ8WXG6 1647 aa25.04■■□□□ 1.6
COL2A1-206ENST00000483376 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
COL2A1-206ENST00000483376 PTPRMP28827 1452 aa25.01■■□□□ 1.59
COL2A1-206ENST00000483376 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
COL2A1-206ENST00000483376 ADGRL2O95490 1459 aa25■■□□□ 1.59
COL2A1-206ENST00000483376 FAM50AQ14320 339 aaKnown RBP24.99■■□□□ 1.59
COL2A1-206ENST00000483376 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
COL2A1-206ENST00000483376 FER1L4A9Z1Z3 1794 aa24.97■■□□□ 1.59
COL2A1-206ENST00000483376 DUOX2Q9NRD8 1548 aa24.96■■□□□ 1.59
COL2A1-206ENST00000483376 MLECQ14165 292 aa24.96■■□□□ 1.59
COL2A1-206ENST00000483376 NCOA1Q15788 1441 aa24.95■■□□□ 1.59
COL2A1-206ENST00000483376 CNTLNQ9NXG0 1405 aa24.95■■□□□ 1.59
COL2A1-206ENST00000483376 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.59
COL2A1-206ENST00000483376 FAM135AQ9P2D6 1515 aa24.95■■□□□ 1.58
COL2A1-206ENST00000483376 KIF15Q9NS87 1388 aa24.94■■□□□ 1.58
COL2A1-206ENST00000483376 EIF2AK4Q9P2K8 1649 aaKnown RBP24.94■■□□□ 1.58
COL2A1-206ENST00000483376 RIMS1Q86UR5 1692 aaKnown RBP24.94■■□□□ 1.58
COL2A1-206ENST00000483376 ERBINQ96RT1 1412 aa24.93■■□□□ 1.58
COL2A1-206ENST00000483376 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
COL2A1-206ENST00000483376 PTPRKQ15262 1439 aa24.89■■□□□ 1.58
COL2A1-206ENST00000483376 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.57
COL2A1-206ENST00000483376 KIF3BO15066 747 aa24.88■■□□□ 1.57
COL2A1-206ENST00000483376 MROH2AA6NES4 1674 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms