RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 CCNB3Q8WWL7 1395 aa19.51■□□□□ 0.71
MRPL55-229ENST00000483159 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
MRPL55-229ENST00000483159 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
MRPL55-229ENST00000483159 FRMPD1Q5SYB0 1578 aa19.5■□□□□ 0.71
MRPL55-229ENST00000483159 KDM4FA0A1W2PPD8 638 aa19.5■□□□□ 0.71
MRPL55-229ENST00000483159 POGZQ7Z3K3 1410 aa19.5■□□□□ 0.71
MRPL55-229ENST00000483159 TIAM1Q13009 1591 aa19.49■□□□□ 0.71
MRPL55-229ENST00000483159 MAGI2Q86UL8 1455 aa19.48■□□□□ 0.71
MRPL55-229ENST00000483159 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
MRPL55-229ENST00000483159 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
MRPL55-229ENST00000483159 RICTORQ6R327 1708 aa19.47■□□□□ 0.71
MRPL55-229ENST00000483159 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
MRPL55-229ENST00000483159 ZMYM4Q5VZL5 1548 aa19.46■□□□□ 0.71
MRPL55-229ENST00000483159 APLP2Q06481 763 aa19.46■□□□□ 0.71
MRPL55-229ENST00000483159 ZNF518AQ6AHZ1 1483 aa19.46■□□□□ 0.71
MRPL55-229ENST00000483159 LRRC9Q6ZRR7 1453 aa19.45■□□□□ 0.7
MRPL55-229ENST00000483159 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
MRPL55-229ENST00000483159 ZNF777Q9ULD5 760 aaPredicted RBP19.44■□□□□ 0.7
MRPL55-229ENST00000483159 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
MRPL55-229ENST00000483159 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
MRPL55-229ENST00000483159 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
MRPL55-229ENST00000483159 NCOA2Q15596 1464 aa19.41■□□□□ 0.7
MRPL55-229ENST00000483159 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
MRPL55-229ENST00000483159 ABCC1P33527 1531 aa19.41■□□□□ 0.7
MRPL55-229ENST00000483159 ZFYVE16Q7Z3T8 1539 aa19.4■□□□□ 0.7
MRPL55-229ENST00000483159 ARHGEF12Q9NZN5 1544 aa19.4■□□□□ 0.7
MRPL55-229ENST00000483159 TRAPPC8Q9Y2L5 1435 aa19.39■□□□□ 0.69
MRPL55-229ENST00000483159 ARHGEF40Q8TER5 1519 aa19.39■□□□□ 0.69
MRPL55-229ENST00000483159 KDM5CP41229 1560 aa19.38■□□□□ 0.69
MRPL55-229ENST00000483159 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
MRPL55-229ENST00000483159 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
MRPL55-229ENST00000483159 MLH3Q9UHC1 1453 aa19.37■□□□□ 0.69
MRPL55-229ENST00000483159 ARID4BQ4LE39 1312 aaPredicted RBP19.37■□□□□ 0.69
MRPL55-229ENST00000483159 HNRNPMP52272 730 aaKnown RBP eCLIP19.37■□□□□ 0.69
MRPL55-229ENST00000483159 SAMD9LQ8IVG5 1584 aa19.36■□□□□ 0.69
MRPL55-229ENST00000483159 ATP10AO60312 1499 aa19.35■□□□□ 0.69
MRPL55-229ENST00000483159 MYT1LQ9UL68 1186 aa19.35■□□□□ 0.69
MRPL55-229ENST00000483159 ITSN2Q9NZM3 1697 aa19.34■□□□□ 0.69
MRPL55-229ENST00000483159 ZNF644Q9H582 1327 aaPredicted RBP19.34■□□□□ 0.69
MRPL55-229ENST00000483159 RSPH4AQ5TD94 716 aa19.33■□□□□ 0.68
MRPL55-229ENST00000483159 SYCP2Q9BX26 1530 aa19.32■□□□□ 0.68
MRPL55-229ENST00000483159 SPAG9O60271 1321 aaKnown RBP19.31■□□□□ 0.68
MRPL55-229ENST00000483159 C9orf84Q5VXU9 1444 aa19.31■□□□□ 0.68
MRPL55-229ENST00000483159 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
MRPL55-229ENST00000483159 MBD5Q9P267 1494 aa19.29■□□□□ 0.68
MRPL55-229ENST00000483159 MIA2Q96PC5 1412 aa19.28■□□□□ 0.68
MRPL55-229ENST00000483159 MYOM3Q5VTT5 1437 aa19.27■□□□□ 0.68
MRPL55-229ENST00000483159 REREQ9P2R6 1566 aa19.25■□□□□ 0.67
MRPL55-229ENST00000483159 CAMSAP2Q08AD1 1489 aa19.25■□□□□ 0.67
MRPL55-229ENST00000483159 ADAMTSL3P82987 1691 aa19.24■□□□□ 0.67
MRPL55-229ENST00000483159 DIP2CQ9Y2E4 1556 aa19.24■□□□□ 0.67
MRPL55-229ENST00000483159 RTEL1-TNFRSF6BF6WH68 1400 aa19.24■□□□□ 0.67
MRPL55-229ENST00000483159 BCORL1Q5H9F3 1711 aa19.23■□□□□ 0.67
MRPL55-229ENST00000483159 KIDINS220Q9ULH0 1771 aa19.22■□□□□ 0.67
MRPL55-229ENST00000483159 TSPY4P0CV99 314 aa19.21■□□□□ 0.67
MRPL55-229ENST00000483159 TSPY10P0CW01 314 aa19.21■□□□□ 0.67
MRPL55-229ENST00000483159 ABCA6Q8N139 1617 aa19.21■□□□□ 0.67
MRPL55-229ENST00000483159 CCDC141Q6ZP82 1450 aa19.21■□□□□ 0.67
MRPL55-229ENST00000483159 AGLP35573 1532 aa19.2■□□□□ 0.66
MRPL55-229ENST00000483159 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
MRPL55-229ENST00000483159 MLECQ14165 292 aa19.2■□□□□ 0.66
MRPL55-229ENST00000483159 PTPRMP28827 1452 aa19.19■□□□□ 0.66
MRPL55-229ENST00000483159 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
MRPL55-229ENST00000483159 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
MRPL55-229ENST00000483159 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
MRPL55-229ENST00000483159 A2MP01023 1474 aa19.16■□□□□ 0.66
MRPL55-229ENST00000483159 FGD6Q6ZV73 1430 aa19.15■□□□□ 0.66
MRPL55-229ENST00000483159 MADDQ8WXG6 1647 aa19.14■□□□□ 0.66
MRPL55-229ENST00000483159 DHX29Q7Z478 1369 aaKnown RBP19.12■□□□□ 0.65
MRPL55-229ENST00000483159 TCOF1Q13428 1488 aaKnown RBP19.11■□□□□ 0.65
MRPL55-229ENST00000483159 ESF1Q9H501 851 aaKnown RBP19.11■□□□□ 0.65
MRPL55-229ENST00000483159 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
MRPL55-229ENST00000483159 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
MRPL55-229ENST00000483159 PTPN23Q9H3S7 1636 aa19.09■□□□□ 0.65
MRPL55-229ENST00000483159 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.64
MRPL55-229ENST00000483159 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
MRPL55-229ENST00000483159 RIMS1Q86UR5 1692 aaKnown RBP19.07■□□□□ 0.64
MRPL55-229ENST00000483159 ABCC5O15440 1437 aa19.07■□□□□ 0.64
MRPL55-229ENST00000483159 CNTLNQ9NXG0 1405 aa19.06■□□□□ 0.64
MRPL55-229ENST00000483159 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
MRPL55-229ENST00000483159 FER1L4A9Z1Z3 1794 aa19.04■□□□□ 0.64
MRPL55-229ENST00000483159 GGT6Q6P531 493 aa19.04■□□□□ 0.64
MRPL55-229ENST00000483159 DAPK1P53355 1430 aa19.03■□□□□ 0.64
MRPL55-229ENST00000483159 KIF3BO15066 747 aa19.03■□□□□ 0.64
MRPL55-229ENST00000483159 FAM50AQ14320 339 aaKnown RBP19.02■□□□□ 0.64
MRPL55-229ENST00000483159 CEBPAP49715 358 aaPredicted RBP19.01■□□□□ 0.63
MRPL55-229ENST00000483159 PPARGC1BQ86YN6 1023 aaKnown RBP19.01■□□□□ 0.63
MRPL55-229ENST00000483159 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
MRPL55-229ENST00000483159 DNMT1P26358 1616 aaKnown RBP19■□□□□ 0.63
MRPL55-229ENST00000483159 ZMYM3Q14202 1370 aa18.97■□□□□ 0.63
MRPL55-229ENST00000483159 ANKRD30AQ9BXX3 1397 aa18.97■□□□□ 0.63
MRPL55-229ENST00000483159 KIF15Q9NS87 1388 aa18.97■□□□□ 0.63
MRPL55-229ENST00000483159 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
MRPL55-229ENST00000483159 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.96■□□□□ 0.63
MRPL55-229ENST00000483159 DUOX2Q9NRD8 1548 aa18.96■□□□□ 0.63
MRPL55-229ENST00000483159 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
MRPL55-229ENST00000483159 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
MRPL55-229ENST00000483159 CROCC2H7BZ55 1655 aa18.94■□□□□ 0.62
MRPL55-229ENST00000483159 WASHC2CQ9Y4E1 1318 aa18.94■□□□□ 0.62
MRPL55-229ENST00000483159 FAM135AQ9P2D6 1515 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms