RNA–Protein interactions for RNA: ENST00000483136.1

CACNA1C-226, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-226ENST00000483136 ARHGEF12Q9NZN5 1544 aa10.39□□□□□ -0.75
CACNA1C-226ENST00000483136 SENP3Q9H4L4 574 aaPredicted RBP10.39□□□□□ -0.75
CACNA1C-226ENST00000483136 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
CACNA1C-226ENST00000483136 UGGT2Q9NYU1 1516 aa10.38□□□□□ -0.75
CACNA1C-226ENST00000483136 FRMPD1Q5SYB0 1578 aa10.37□□□□□ -0.75
CACNA1C-226ENST00000483136 ZFYVE16Q7Z3T8 1539 aa10.37□□□□□ -0.75
CACNA1C-226ENST00000483136 UPF1Q92900 1129 aaKnown RBP eCLIP10.35□□□□□ -0.75
CACNA1C-226ENST00000483136 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
CACNA1C-226ENST00000483136 ATP10AO60312 1499 aa10.35□□□□□ -0.75
CACNA1C-226ENST00000483136 ZMYM4Q5VZL5 1548 aa10.34□□□□□ -0.75
CACNA1C-226ENST00000483136 KIAA0556O60303 1618 aa10.34□□□□□ -0.75
CACNA1C-226ENST00000483136 POTEAQ6S8J7 498 aa10.34□□□□□ -0.75
CACNA1C-226ENST00000483136 GOLGA3Q08378 1498 aa10.33□□□□□ -0.76
CACNA1C-226ENST00000483136 CPS1P31327 1500 aa10.33□□□□□ -0.76
CACNA1C-226ENST00000483136 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
CACNA1C-226ENST00000483136 C9orf84Q5VXU9 1444 aa10.32□□□□□ -0.76
CACNA1C-226ENST00000483136 RICTORQ6R327 1708 aa10.31□□□□□ -0.76
CACNA1C-226ENST00000483136 ABCA8O94911 1581 aa10.31□□□□□ -0.76
CACNA1C-226ENST00000483136 CAMSAP1Q5T5Y3 1602 aa10.3□□□□□ -0.76
CACNA1C-226ENST00000483136 PLA2R1Q13018 1463 aa10.3□□□□□ -0.76
CACNA1C-226ENST00000483136 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
CACNA1C-226ENST00000483136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
CACNA1C-226ENST00000483136 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
CACNA1C-226ENST00000483136 NPATQ14207 1427 aa10.27□□□□□ -0.77
CACNA1C-226ENST00000483136 CNTLNQ9NXG0 1405 aa10.27□□□□□ -0.77
CACNA1C-226ENST00000483136 ATP10BO94823 1461 aa10.27□□□□□ -0.77
CACNA1C-226ENST00000483136 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
CACNA1C-226ENST00000483136 PLEKHD1A6NEE1 506 aa10.25□□□□□ -0.77
CACNA1C-226ENST00000483136 RAPGEF2Q9Y4G8 1499 aa10.24□□□□□ -0.77
CACNA1C-226ENST00000483136 SHANK2Q9UPX8 1470 aa10.23□□□□□ -0.77
CACNA1C-226ENST00000483136 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
CACNA1C-226ENST00000483136 TCOF1Q13428 1488 aaKnown RBP10.23□□□□□ -0.77
CACNA1C-226ENST00000483136 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
CACNA1C-226ENST00000483136 SIGLEC1Q9BZZ2 1709 aa10.22□□□□□ -0.77
CACNA1C-226ENST00000483136 ZNF772Q68DY9 489 aaPredicted RBP10.21□□□□□ -0.77
CACNA1C-226ENST00000483136 SCAPERQ9BY12 1400 aa10.21□□□□□ -0.78
CACNA1C-226ENST00000483136 C3P01024 1663 aa10.21□□□□□ -0.78
CACNA1C-226ENST00000483136 ARID3CA6NKF2 412 aa10.2□□□□□ -0.78
CACNA1C-226ENST00000483136 MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
CACNA1C-226ENST00000483136 AGLP35573 1532 aa10.19□□□□□ -0.78
CACNA1C-226ENST00000483136 SRCAPQ6ZRS2 3230 aa10.18□□□□□ -0.78
CACNA1C-226ENST00000483136 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
CACNA1C-226ENST00000483136 ZMYM3Q14202 1370 aa10.15□□□□□ -0.78
CACNA1C-226ENST00000483136 RXRBP28702 533 aa10.15□□□□□ -0.78
CACNA1C-226ENST00000483136 ANKLE2Q86XL3 938 aa10.15□□□□□ -0.78
CACNA1C-226ENST00000483136 RBM33Q96EV2 1170 aaKnown RBP10.15□□□□□ -0.78
CACNA1C-226ENST00000483136 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
CACNA1C-226ENST00000483136 TRIM52Q96A61 297 aa10.13□□□□□ -0.79
CACNA1C-226ENST00000483136 FAM135BQ49AJ0 1406 aa10.13□□□□□ -0.79
CACNA1C-226ENST00000483136 ZNF518AQ6AHZ1 1483 aa10.12□□□□□ -0.79
CACNA1C-226ENST00000483136 SETD1AO15047 1707 aaKnown RBP10.12□□□□□ -0.79
CACNA1C-226ENST00000483136 SUPT6HQ7KZ85 1726 aaKnown RBP10.11□□□□□ -0.79
CACNA1C-226ENST00000483136 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
CACNA1C-226ENST00000483136 PLCH2O75038 1416 aa10.1□□□□□ -0.79
CACNA1C-226ENST00000483136 CDK12Q9NYV4 1490 aaPredicted RBP10.1□□□□□ -0.79
CACNA1C-226ENST00000483136 ZNF142P52746 1687 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-226ENST00000483136 THEMISQ8N1K5 641 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-226ENST00000483136 CEP170BQ9Y4F5 1589 aaPredicted RBP10.09□□□□□ -0.79
CACNA1C-226ENST00000483136 MROH2AA6NES4 1674 aa10.08□□□□□ -0.8
CACNA1C-226ENST00000483136 AFAP1Q8N556 730 aa10.07□□□□□ -0.8
CACNA1C-226ENST00000483136 RNF17Q9BXT8 1623 aaKnown RBP10.07□□□□□ -0.8
CACNA1C-226ENST00000483136 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.07□□□□□ -0.8
CACNA1C-226ENST00000483136 A2ML1A8K2U0 1454 aa10.06□□□□□ -0.8
CACNA1C-226ENST00000483136 JCADQ9P266 1359 aa10.06□□□□□ -0.8
CACNA1C-226ENST00000483136 MEX3CQ5U5Q3 659 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-226ENST00000483136 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
CACNA1C-226ENST00000483136 MLH3Q9UHC1 1453 aa10.05□□□□□ -0.8
CACNA1C-226ENST00000483136 LRRC7Q96NW7 1537 aa10.05□□□□□ -0.8
CACNA1C-226ENST00000483136 SPATA31A6Q5VVP1 1343 aa10.04□□□□□ -0.8
CACNA1C-226ENST00000483136 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.03□□□□□ -0.8
CACNA1C-226ENST00000483136 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
CACNA1C-226ENST00000483136 VWDEQ8N2E2 1590 aa10.03□□□□□ -0.8
CACNA1C-226ENST00000483136 MYO3AQ8NEV4 1616 aa10.03□□□□□ -0.8
CACNA1C-226ENST00000483136 RAPGEF6Q8TEU7 1601 aa10.02□□□□□ -0.81
CACNA1C-226ENST00000483136 MED14O60244 1454 aa10.02□□□□□ -0.81
CACNA1C-226ENST00000483136 KDM5CP41229 1560 aa10.01□□□□□ -0.81
CACNA1C-226ENST00000483136 NPHP4O75161 1426 aaPredicted RBP10.01□□□□□ -0.81
CACNA1C-226ENST00000483136 CTTNBP2Q8WZ74 1663 aa10.01□□□□□ -0.81
CACNA1C-226ENST00000483136 SYNMO15061 1565 aa10.01□□□□□ -0.81
CACNA1C-226ENST00000483136 DIP2CQ9Y2E4 1556 aa10.01□□□□□ -0.81
CACNA1C-226ENST00000483136 POLR1AO95602 1720 aaPredicted RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 NUTM2BA6NNL0 878 aaPredicted RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 NUTM2EB1AL46 878 aaPredicted RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 NUTM2DQ5VT03 806 aaPredicted RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 NUTM2AQ8IVF1 878 aaPredicted RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 DNMT1P26358 1616 aaKnown RBP10□□□□□ -0.81
CACNA1C-226ENST00000483136 CDK11AQ9UQ88 783 aaPredicted RBP9.99□□□□□ -0.81
CACNA1C-226ENST00000483136 ATAD2Q6PL18 1390 aa9.99□□□□□ -0.81
CACNA1C-226ENST00000483136 CDK13Q14004 1512 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-226ENST00000483136 YY1P25490 414 aa9.98□□□□□ -0.81
CACNA1C-226ENST00000483136 RBM6P78332 1123 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-226ENST00000483136 NGLY1Q96IV0 654 aa9.98□□□□□ -0.81
CACNA1C-226ENST00000483136 NUP153P49790 1475 aaKnown RBP9.98□□□□□ -0.81
CACNA1C-226ENST00000483136 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
CACNA1C-226ENST00000483136 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
CACNA1C-226ENST00000483136 FGD6Q6ZV73 1430 aa9.95□□□□□ -0.82
CACNA1C-226ENST00000483136 LRRC9Q6ZRR7 1453 aa9.95□□□□□ -0.82
CACNA1C-226ENST00000483136 DEPDC5O75140 1603 aa9.95□□□□□ -0.82
CACNA1C-226ENST00000483136 FAM135AQ9P2D6 1515 aa9.94□□□□□ -0.82
CACNA1C-226ENST00000483136 SETBP1Q9Y6X0 1596 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms