RNA–Protein interactions for RNA: ENST00000483081.1

CHN2-223, Transcript of chimerin 2, human

TSL 5

Gene CHN2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHN2-223	ENST00000483081	NLRP6	P59044	892 aa		11.82	□□□□□ -0.52
CHN2-223	ENST00000483081	NKX1-1	Q15270	411 aa	Predicted RBP	11.82	□□□□□ -0.52
CHN2-223	ENST00000483081	MAMSTR	Q6ZN01	415 aa		11.82	□□□□□ -0.52
CHN2-223	ENST00000483081	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.81	□□□□□ -0.52
CHN2-223	ENST00000483081	SCUBE2	Q9NQ36	999 aa		11.81	□□□□□ -0.52
CHN2-223	ENST00000483081	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.81	□□□□□ -0.52
CHN2-223	ENST00000483081	BOLA1	Q9Y3E2	137 aa		11.78	□□□□□ -0.52
CHN2-223	ENST00000483081	PPP1R37	O75864	691 aa		11.76	□□□□□ -0.53
CHN2-223	ENST00000483081	SLC24A1	O60721	1099 aa		11.74	□□□□□ -0.53
CHN2-223	ENST00000483081	DNAJC5	Q9H3Z4	198 aa		11.74	□□□□□ -0.53
CHN2-223	ENST00000483081	NES	P48681	1621 aa		11.74	□□□□□ -0.53
CHN2-223	ENST00000483081	SLAIN1	Q8ND83	568 aa		11.73	□□□□□ -0.53
CHN2-223	ENST00000483081	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.73	□□□□□ -0.53
CHN2-223	ENST00000483081		G3V3G9	751 aa		11.72	□□□□□ -0.53
CHN2-223	ENST00000483081	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.72	□□□□□ -0.53
CHN2-223	ENST00000483081	CUX2	O14529	1486 aa		11.71	□□□□□ -0.53
CHN2-223	ENST00000483081	C3orf67	Q6ZVT6	689 aa		11.71	□□□□□ -0.53
CHN2-223	ENST00000483081	MICALL2	Q8IY33	904 aa		11.71	□□□□□ -0.53
CHN2-223	ENST00000483081	WIZ	O95785	1651 aa		11.7	□□□□□ -0.54
CHN2-223	ENST00000483081	LAMC3	Q9Y6N6	1575 aa		11.69	□□□□□ -0.54
CHN2-223	ENST00000483081	ERCC6	Q03468	1493 aa		11.69	□□□□□ -0.54
CHN2-223	ENST00000483081	GTPBP6	O43824	516 aa	Predicted RBP	11.66	□□□□□ -0.54
CHN2-223	ENST00000483081	RSF1	Q96T23	1441 aa	Predicted RBP	11.66	□□□□□ -0.54
CHN2-223	ENST00000483081	TMEM92	Q6UXU6	159 aa		11.64	□□□□□ -0.55
CHN2-223	ENST00000483081	THOC2	Q8NI27	1593 aa	Known RBP	11.63	□□□□□ -0.55
CHN2-223	ENST00000483081	BBX	Q8WY36	941 aa	Predicted RBP	11.63	□□□□□ -0.55
CHN2-223	ENST00000483081	CADPS	Q9ULU8	1353 aa		11.62	□□□□□ -0.55
CHN2-223	ENST00000483081	FAM163A	Q96GL9	167 aa	Predicted RBP	11.6	□□□□□ -0.55
CHN2-223	ENST00000483081	PDS5B	Q9NTI5	1447 aa		11.6	□□□□□ -0.55
CHN2-223	ENST00000483081	KIF21A	Q7Z4S6	1674 aa		11.59	□□□□□ -0.55
CHN2-223	ENST00000483081	TOP2A	P11388	1531 aa	Known RBP	11.58	□□□□□ -0.56
CHN2-223	ENST00000483081	RYDEN	Q9NUL5	291 aa	Known RBP	11.55	□□□□□ -0.56
CHN2-223	ENST00000483081	CFTR	P13569	1480 aa		11.53	□□□□□ -0.56
CHN2-223	ENST00000483081	LCE2D	Q5TA82	110 aa	Predicted RBP	11.52	□□□□□ -0.57
CHN2-223	ENST00000483081	C2orf72	A6NCS6	295 aa		11.51	□□□□□ -0.57
CHN2-223	ENST00000483081	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.51	□□□□□ -0.57
CHN2-223	ENST00000483081	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.51	□□□□□ -0.57
CHN2-223	ENST00000483081	SPRYD3	Q8NCJ5	442 aa		11.5	□□□□□ -0.57
CHN2-223	ENST00000483081	CFAP44	Q96MT7	982 aa		11.5	□□□□□ -0.57
CHN2-223	ENST00000483081	MRC2	Q9UBG0	1479 aa		11.5	□□□□□ -0.57
CHN2-223	ENST00000483081	WDR62	O43379	1518 aa		11.5	□□□□□ -0.57
CHN2-223	ENST00000483081	KIF3C	O14782	793 aa		11.48	□□□□□ -0.57
CHN2-223	ENST00000483081	ST18	O60284	1047 aa		11.47	□□□□□ -0.57
CHN2-223	ENST00000483081	FANCD2	Q9BXW9	1451 aa		11.46	□□□□□ -0.57
CHN2-223	ENST00000483081	HOXB3	P14651	431 aa	Predicted RBP	11.46	□□□□□ -0.57
CHN2-223	ENST00000483081	TMC2	Q8TDI7	906 aa		11.46	□□□□□ -0.57
CHN2-223	ENST00000483081	CEP164	Q9UPV0	1460 aa		11.45	□□□□□ -0.58
CHN2-223	ENST00000483081	SNPH	O15079	494 aa		11.45	□□□□□ -0.58
CHN2-223	ENST00000483081	CADPS2	Q86UW7	1296 aa		11.45	□□□□□ -0.58
CHN2-223	ENST00000483081	CCDC88B	A6NC98	1476 aa		11.44	□□□□□ -0.58
CHN2-223	ENST00000483081	GPHN	Q9NQX3	736 aa	Predicted RBP	11.41	□□□□□ -0.58
CHN2-223	ENST00000483081	PRDM2	Q13029	1718 aa		11.4	□□□□□ -0.58
CHN2-223	ENST00000483081	NCKAP5L	Q9HCH0	1330 aa		11.4	□□□□□ -0.58
CHN2-223	ENST00000483081	URB2	Q14146	1524 aa	Known RBP	11.4	□□□□□ -0.59
CHN2-223	ENST00000483081	DSG2	Q14126	1118 aa		11.38	□□□□□ -0.59
CHN2-223	ENST00000483081	CRISPLD2	Q9H0B8	497 aa		11.38	□□□□□ -0.59
CHN2-223	ENST00000483081	MARVELD3	Q96A59	401 aa		11.37	□□□□□ -0.59
CHN2-223	ENST00000483081	POTEM	A6NI47	508 aa		11.36	□□□□□ -0.59
CHN2-223	ENST00000483081	DOK7	Q18PE1	504 aa		11.36	□□□□□ -0.59
CHN2-223	ENST00000483081	POTEG	Q6S5H5	508 aa		11.36	□□□□□ -0.59
CHN2-223	ENST00000483081	PLPP6	Q8IY26	295 aa		11.36	□□□□□ -0.59
CHN2-223	ENST00000483081	ZNF710	Q8N1W2	664 aa		11.36	□□□□□ -0.59
CHN2-223	ENST00000483081	PDE4A	P27815	886 aa		11.35	□□□□□ -0.59
CHN2-223	ENST00000483081	FOXK1	P85037	733 aa		11.35	□□□□□ -0.59
CHN2-223	ENST00000483081	LARP6	Q9BRS8	491 aa	Known RBP	11.35	□□□□□ -0.59
CHN2-223	ENST00000483081	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
CHN2-223	ENST00000483081	ARSI	Q5FYB1	569 aa		11.32	□□□□□ -0.6
CHN2-223	ENST00000483081	GPR153	Q6NV75	609 aa		11.31	□□□□□ -0.6
CHN2-223	ENST00000483081	HOXB1	P14653	301 aa	Predicted RBP	11.3	□□□□□ -0.6
CHN2-223	ENST00000483081	TSHZ2	Q9NRE2	1034 aa		11.3	□□□□□ -0.6
CHN2-223	ENST00000483081	RIMBP2	O15034	1052 aa		11.29	□□□□□ -0.6
CHN2-223	ENST00000483081	PPP1R15B	Q5SWA1	713 aa		11.29	□□□□□ -0.6
CHN2-223	ENST00000483081	TOPBP1	Q92547	1522 aa		11.28	□□□□□ -0.6
CHN2-223	ENST00000483081	DDX27	Q96GQ7	796 aa	Known RBP	11.27	□□□□□ -0.61
CHN2-223	ENST00000483081	ABCC8	Q09428	1581 aa		11.26	□□□□□ -0.61
CHN2-223	ENST00000483081	SLC34A2	O95436	690 aa		11.26	□□□□□ -0.61
CHN2-223	ENST00000483081	EMP3	P54852	163 aa		11.26	□□□□□ -0.61
CHN2-223	ENST00000483081	PCDHGA4	Q9Y5G9	962 aa		11.26	□□□□□ -0.61
CHN2-223	ENST00000483081	POTEB3	A0JP26	581 aa		11.25	□□□□□ -0.61
CHN2-223	ENST00000483081	MFSD10	Q14728	455 aa		11.25	□□□□□ -0.61
CHN2-223	ENST00000483081	POTEB	Q6S5H4	581 aa		11.25	□□□□□ -0.61
CHN2-223	ENST00000483081	ZSWIM6	Q9HCJ5	1215 aa		11.25	□□□□□ -0.61
CHN2-223	ENST00000483081	IFT140	Q96RY7	1462 aa		11.25	□□□□□ -0.61
CHN2-223	ENST00000483081	DNMBP	Q6XZF7	1577 aa		11.24	□□□□□ -0.61
CHN2-223	ENST00000483081	FAM205C	A6NFA0	338 aa		11.24	□□□□□ -0.61
CHN2-223	ENST00000483081	PLCB2	Q00722	1185 aa		11.23	□□□□□ -0.61
CHN2-223	ENST00000483081	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
CHN2-223	ENST00000483081	NUDT7	P0C024	238 aa		11.22	□□□□□ -0.61
CHN2-223	ENST00000483081	PTCD2	Q8WV60	388 aa	Known RBP	11.22	□□□□□ -0.61
CHN2-223	ENST00000483081	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.22	□□□□□ -0.61
CHN2-223	ENST00000483081	TARBP1	Q13395	1621 aa	Known RBP	11.2	□□□□□ -0.62
CHN2-223	ENST00000483081	HS3ST6	Q96QI5	342 aa		11.19	□□□□□ -0.62
CHN2-223	ENST00000483081	ERBB3	P21860	1342 aa		11.18	□□□□□ -0.62
CHN2-223	ENST00000483081	OXER1	Q8TDS5	423 aa		11.18	□□□□□ -0.62
CHN2-223	ENST00000483081	EMILIN3	Q9NT22	766 aa		11.18	□□□□□ -0.62
CHN2-223	ENST00000483081	POLA1	P09884	1462 aa	Predicted RBP	11.18	□□□□□ -0.62
CHN2-223	ENST00000483081	CDAN1	Q8IWY9	1227 aa		11.16	□□□□□ -0.62
CHN2-223	ENST00000483081	EIF4G3	O43432	1585 aa	Known RBP	11.16	□□□□□ -0.62
CHN2-223	ENST00000483081	KDM4F	A0A1W2PPD8	638 aa		11.15	□□□□□ -0.62
CHN2-223	ENST00000483081	VARS2	Q5ST30	1063 aa	Known RBP	11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms