RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 PLCH2O75038 1416 aa22.81■■□□□ 1.24
PHGDH-205ENST00000482968 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
PHGDH-205ENST00000482968 PREX2Q70Z35 1606 aa22.8■■□□□ 1.24
PHGDH-205ENST00000482968 ARHGAP5Q13017 1502 aa22.79■■□□□ 1.24
PHGDH-205ENST00000482968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.78■■□□□ 1.24
PHGDH-205ENST00000482968 TCOF1Q13428 1488 aaKnown RBP22.78■■□□□ 1.24
PHGDH-205ENST00000482968 CD109Q6YHK3 1445 aa22.77■■□□□ 1.24
PHGDH-205ENST00000482968 EFCAB2Q5VUJ9 269 aa22.76■■□□□ 1.23
PHGDH-205ENST00000482968 DIP2BQ9P265 1576 aa22.75■■□□□ 1.23
PHGDH-205ENST00000482968 CAMSAP2Q08AD1 1489 aa22.74■■□□□ 1.23
PHGDH-205ENST00000482968 GLI2P10070 1586 aa22.74■■□□□ 1.23
PHGDH-205ENST00000482968 HNRNPMP52272 730 aaKnown RBP eCLIP22.71■■□□□ 1.23
PHGDH-205ENST00000482968 SAMD9LQ8IVG5 1584 aa22.7■■□□□ 1.22
PHGDH-205ENST00000482968 ARAP3Q8WWN8 1544 aa22.7■■□□□ 1.22
PHGDH-205ENST00000482968 FANCAO15360 1455 aa22.69■■□□□ 1.22
PHGDH-205ENST00000482968 MAP3K4Q9Y6R4 1608 aa22.69■■□□□ 1.22
PHGDH-205ENST00000482968 KIF13AQ9H1H9 1805 aa22.67■■□□□ 1.22
PHGDH-205ENST00000482968 TSPOAP1O95153 1857 aa22.64■■□□□ 1.22
PHGDH-205ENST00000482968 PTPRKQ15262 1439 aa22.64■■□□□ 1.22
PHGDH-205ENST00000482968 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.22
PHGDH-205ENST00000482968 TRHP20396 242 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-205ENST00000482968 AEBP2Q6ZN18 517 aaPredicted RBP22.63■■□□□ 1.21
PHGDH-205ENST00000482968 ABCC5O15440 1437 aa22.63■■□□□ 1.21
PHGDH-205ENST00000482968 DAPK1P53355 1430 aa22.63■■□□□ 1.21
PHGDH-205ENST00000482968 PLEKHH2Q8IVE3 1493 aa22.63■■□□□ 1.21
PHGDH-205ENST00000482968 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
PHGDH-205ENST00000482968 SYCP2Q9BX26 1530 aa22.62■■□□□ 1.21
PHGDH-205ENST00000482968 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
PHGDH-205ENST00000482968 KIAA1107Q9UPP5 1409 aa22.62■■□□□ 1.21
PHGDH-205ENST00000482968 MBD5Q9P267 1494 aa22.61■■□□□ 1.21
PHGDH-205ENST00000482968 RSPH4AQ5TD94 716 aa22.61■■□□□ 1.21
PHGDH-205ENST00000482968 ARHGEF12Q9NZN5 1544 aa22.6■■□□□ 1.21
PHGDH-205ENST00000482968 ABCC1P33527 1531 aa22.59■■□□□ 1.21
PHGDH-205ENST00000482968 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
PHGDH-205ENST00000482968 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
PHGDH-205ENST00000482968 ADGRL1O94910 1474 aa22.58■■□□□ 1.21
PHGDH-205ENST00000482968 SCAPERQ9BY12 1400 aa22.58■■□□□ 1.2
PHGDH-205ENST00000482968 CFAP74Q9C0B2 1584 aa22.57■■□□□ 1.2
PHGDH-205ENST00000482968 ARHGEF5Q12774 1597 aa22.57■■□□□ 1.2
PHGDH-205ENST00000482968 NEO1Q92859 1461 aa22.56■■□□□ 1.2
PHGDH-205ENST00000482968 AFAP1Q8N556 730 aa22.55■■□□□ 1.2
PHGDH-205ENST00000482968 TRAPPC8Q9Y2L5 1435 aa22.55■■□□□ 1.2
PHGDH-205ENST00000482968 CCDC141Q6ZP82 1450 aa22.55■■□□□ 1.2
PHGDH-205ENST00000482968 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
PHGDH-205ENST00000482968 RRP7BPQ9NSQ0 103 aa22.54■■□□□ 1.2
PHGDH-205ENST00000482968 CROCC2H7BZ55 1655 aa22.53■■□□□ 1.2
PHGDH-205ENST00000482968 TEX14Q8IWB6 1497 aa22.53■■□□□ 1.2
PHGDH-205ENST00000482968 C9orf84Q5VXU9 1444 aa22.51■■□□□ 1.19
PHGDH-205ENST00000482968 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
PHGDH-205ENST00000482968 RAPGEF3O95398 923 aa22.48■■□□□ 1.19
PHGDH-205ENST00000482968 ROCK1Q13464 1354 aa22.47■■□□□ 1.19
PHGDH-205ENST00000482968 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
PHGDH-205ENST00000482968 SPAG9O60271 1321 aaKnown RBP22.46■■□□□ 1.19
PHGDH-205ENST00000482968 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
PHGDH-205ENST00000482968 MYT1LQ9UL68 1186 aa22.46■■□□□ 1.19
PHGDH-205ENST00000482968 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
PHGDH-205ENST00000482968 DENND4BO75064 1496 aaPredicted RBP22.45■■□□□ 1.18
PHGDH-205ENST00000482968 HFM1A2PYH4 1435 aa22.45■■□□□ 1.18
PHGDH-205ENST00000482968 ADGBQ8N7X0 1667 aa22.45■■□□□ 1.18
PHGDH-205ENST00000482968 NAIPQ13075 1403 aa22.44■■□□□ 1.18
PHGDH-205ENST00000482968 ZNF518AQ6AHZ1 1483 aa22.44■■□□□ 1.18
PHGDH-205ENST00000482968 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
PHGDH-205ENST00000482968 POGZQ7Z3K3 1410 aa22.43■■□□□ 1.18
PHGDH-205ENST00000482968 RAB3GAP2Q9H2M9 1393 aa22.42■■□□□ 1.18
PHGDH-205ENST00000482968 MAST1Q9Y2H9 1570 aa22.42■■□□□ 1.18
PHGDH-205ENST00000482968 RTEL1-TNFRSF6BF6WH68 1400 aa22.39■■□□□ 1.17
PHGDH-205ENST00000482968 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
PHGDH-205ENST00000482968 RICTORQ6R327 1708 aa22.37■■□□□ 1.17
PHGDH-205ENST00000482968 GCC2Q8IWJ2 1684 aa22.37■■□□□ 1.17
PHGDH-205ENST00000482968 COL17A1Q9UMD9 1497 aaPredicted RBP22.36■■□□□ 1.17
PHGDH-205ENST00000482968 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
PHGDH-205ENST00000482968 KDM5CP41229 1560 aa22.36■■□□□ 1.17
PHGDH-205ENST00000482968 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
PHGDH-205ENST00000482968 INO80Q9ULG1 1556 aaPredicted RBP22.34■■□□□ 1.17
PHGDH-205ENST00000482968 HRCP23327 699 aa22.33■■□□□ 1.17
PHGDH-205ENST00000482968 KIDINS220Q9ULH0 1771 aa22.33■■□□□ 1.17
PHGDH-205ENST00000482968 KDM6BO15054 1643 aa22.33■■□□□ 1.17
PHGDH-205ENST00000482968 PLXNC1O60486 1568 aa22.33■■□□□ 1.17
PHGDH-205ENST00000482968 MLH3Q9UHC1 1453 aa22.33■■□□□ 1.16
PHGDH-205ENST00000482968 FRMPD1Q5SYB0 1578 aa22.32■■□□□ 1.16
PHGDH-205ENST00000482968 ANKRD50Q9ULJ7 1429 aa22.32■■□□□ 1.16
PHGDH-205ENST00000482968 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
PHGDH-205ENST00000482968 TRIM52Q96A61 297 aa22.27■■□□□ 1.16
PHGDH-205ENST00000482968 DUOX2Q9NRD8 1548 aa22.27■■□□□ 1.16
PHGDH-205ENST00000482968 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-205ENST00000482968 ZMYM4Q5VZL5 1548 aa22.25■■□□□ 1.15
PHGDH-205ENST00000482968 YEATS2Q9ULM3 1422 aa22.24■■□□□ 1.15
PHGDH-205ENST00000482968 DHX29Q7Z478 1369 aaKnown RBP22.23■■□□□ 1.15
PHGDH-205ENST00000482968 ABCA6Q8N139 1617 aa22.22■■□□□ 1.15
PHGDH-205ENST00000482968 MAGI2Q86UL8 1455 aa22.22■■□□□ 1.15
PHGDH-205ENST00000482968 ERBINQ96RT1 1412 aa22.21■■□□□ 1.15
PHGDH-205ENST00000482968 A2MP01023 1474 aa22.21■■□□□ 1.15
PHGDH-205ENST00000482968 DIP2CQ9Y2E4 1556 aa22.2■■□□□ 1.14
PHGDH-205ENST00000482968 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
PHGDH-205ENST00000482968 DHX57Q6P158 1386 aaKnown RBP22.19■■□□□ 1.14
PHGDH-205ENST00000482968 KIF3BO15066 747 aa22.18■■□□□ 1.14
PHGDH-205ENST00000482968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
PHGDH-205ENST00000482968 NUP155O75694 1391 aa22.15■■□□□ 1.14
PHGDH-205ENST00000482968 ATP10AO60312 1499 aa22.15■■□□□ 1.14
PHGDH-205ENST00000482968 MPHOSPH9Q99550 1183 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms