RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
TVP23B-203ENST00000482741 ABCC10Q5T3U5 1492 aa12.73□□□□□ -0.37
TVP23B-203ENST00000482741 AKNAQ7Z591 1439 aa12.73□□□□□ -0.37
TVP23B-203ENST00000482741 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
TVP23B-203ENST00000482741 SHANK2Q9UPX8 1470 aa12.7□□□□□ -0.38
TVP23B-203ENST00000482741 KDM5CP41229 1560 aa12.7□□□□□ -0.38
TVP23B-203ENST00000482741 CEP162Q5TB80 1403 aa12.7□□□□□ -0.38
TVP23B-203ENST00000482741 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
TVP23B-203ENST00000482741 RICTORQ6R327 1708 aa12.68□□□□□ -0.38
TVP23B-203ENST00000482741 TSHZ2Q9NRE2 1034 aa12.68□□□□□ -0.38
TVP23B-203ENST00000482741 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
TVP23B-203ENST00000482741 KDM5AP29375 1690 aaKnown RBP12.67□□□□□ -0.38
TVP23B-203ENST00000482741 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
TVP23B-203ENST00000482741 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
TVP23B-203ENST00000482741 KIF14Q15058 1648 aa12.67□□□□□ -0.38
TVP23B-203ENST00000482741 ERCC6L2Q5T890 1561 aa12.66□□□□□ -0.38
TVP23B-203ENST00000482741 MAGI3Q5TCQ9 1506 aa12.66□□□□□ -0.38
TVP23B-203ENST00000482741 RNF17Q9BXT8 1623 aaKnown RBP12.65□□□□□ -0.38
TVP23B-203ENST00000482741 ZC3H13Q5T200 1668 aaKnown RBP12.64□□□□□ -0.39
TVP23B-203ENST00000482741 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
TVP23B-203ENST00000482741 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
TVP23B-203ENST00000482741 MAGI2Q86UL8 1455 aa12.63□□□□□ -0.39
TVP23B-203ENST00000482741 UBTFP17480 764 aaKnown RBP12.62□□□□□ -0.39
TVP23B-203ENST00000482741 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
TVP23B-203ENST00000482741 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
TVP23B-203ENST00000482741 UNC13BO14795 1591 aa12.61□□□□□ -0.39
TVP23B-203ENST00000482741 MROH2AA6NES4 1674 aa12.61□□□□□ -0.39
TVP23B-203ENST00000482741 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
TVP23B-203ENST00000482741 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
TVP23B-203ENST00000482741 VWDEQ8N2E2 1590 aa12.59□□□□□ -0.39
TVP23B-203ENST00000482741 MIA2Q96PC5 1412 aa12.59□□□□□ -0.39
TVP23B-203ENST00000482741 TRIM26Q12899 539 aaPredicted RBP12.59□□□□□ -0.39
TVP23B-203ENST00000482741 LRRC9Q6ZRR7 1453 aa12.58□□□□□ -0.4
TVP23B-203ENST00000482741 CLIP1P30622 1438 aa12.58□□□□□ -0.4
TVP23B-203ENST00000482741 NPM2Q86SE8 214 aaKnown RBP12.57□□□□□ -0.4
TVP23B-203ENST00000482741 ABCC1P33527 1531 aa12.57□□□□□ -0.4
TVP23B-203ENST00000482741 NBR1Q14596 966 aa12.57□□□□□ -0.4
TVP23B-203ENST00000482741 PTPN23Q9H3S7 1636 aa12.57□□□□□ -0.4
TVP23B-203ENST00000482741 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
TVP23B-203ENST00000482741 UACAQ9BZF9 1416 aa12.56□□□□□ -0.4
TVP23B-203ENST00000482741 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
TVP23B-203ENST00000482741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.55□□□□□ -0.4
TVP23B-203ENST00000482741 NPM1P06748 294 aaKnown RBP eCLIP12.54□□□□□ -0.4
TVP23B-203ENST00000482741 TRIM41Q8WV44 630 aa12.54□□□□□ -0.4
TVP23B-203ENST00000482741 TTC37Q6PGP7 1564 aa12.53□□□□□ -0.4
TVP23B-203ENST00000482741 PLB1Q6P1J6 1458 aa12.52□□□□□ -0.41
TVP23B-203ENST00000482741 NEO1Q92859 1461 aa12.52□□□□□ -0.41
TVP23B-203ENST00000482741 SAMD9LQ8IVG5 1584 aa12.51□□□□□ -0.41
TVP23B-203ENST00000482741 ATP10BO94823 1461 aa12.5□□□□□ -0.41
TVP23B-203ENST00000482741 KIAA1107Q9UPP5 1409 aa12.5□□□□□ -0.41
TVP23B-203ENST00000482741 PKD2Q13563 968 aa12.5□□□□□ -0.41
TVP23B-203ENST00000482741 PLEKHH2Q8IVE3 1493 aa12.49□□□□□ -0.41
TVP23B-203ENST00000482741 LMTK2Q8IWU2 1503 aa12.48□□□□□ -0.41
TVP23B-203ENST00000482741 TROQ12816 1431 aaPredicted RBP12.48□□□□□ -0.41
TVP23B-203ENST00000482741 PRG4Q92954 1404 aaPredicted RBP12.47□□□□□ -0.41
TVP23B-203ENST00000482741 AGLP35573 1532 aa12.47□□□□□ -0.41
TVP23B-203ENST00000482741 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.47□□□□□ -0.41
TVP23B-203ENST00000482741 CAMSAP2Q08AD1 1489 aa12.46□□□□□ -0.41
TVP23B-203ENST00000482741 MAPK8IP2Q13387 824 aaPredicted RBP12.46□□□□□ -0.42
TVP23B-203ENST00000482741 ARID3AQ99856 593 aa12.45□□□□□ -0.42
TVP23B-203ENST00000482741 IQGAP3Q86VI3 1631 aa12.45□□□□□ -0.42
TVP23B-203ENST00000482741 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
TVP23B-203ENST00000482741 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
TVP23B-203ENST00000482741 RTEL1-TNFRSF6BF6WH68 1400 aa12.43□□□□□ -0.42
TVP23B-203ENST00000482741 MROH1Q8NDA8 1641 aa12.42□□□□□ -0.42
TVP23B-203ENST00000482741 IFT172Q9UG01 1749 aa12.42□□□□□ -0.42
TVP23B-203ENST00000482741 IFNLR1Q8IU57 520 aaPredicted RBP12.41□□□□□ -0.42
TVP23B-203ENST00000482741 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
TVP23B-203ENST00000482741 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
TVP23B-203ENST00000482741 ARHGEF40Q8TER5 1519 aa12.4□□□□□ -0.42
TVP23B-203ENST00000482741 ZFYVE16Q7Z3T8 1539 aa12.39□□□□□ -0.43
TVP23B-203ENST00000482741 ROCK1Q13464 1354 aa12.39□□□□□ -0.43
TVP23B-203ENST00000482741 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
TVP23B-203ENST00000482741 HECW2Q9P2P5 1572 aa12.38□□□□□ -0.43
TVP23B-203ENST00000482741 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
TVP23B-203ENST00000482741 NCOA2Q15596 1464 aa12.37□□□□□ -0.43
TVP23B-203ENST00000482741 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
TVP23B-203ENST00000482741 LAMC1P11047 1609 aa12.36□□□□□ -0.43
TVP23B-203ENST00000482741 MBD5Q9P267 1494 aa12.36□□□□□ -0.43
TVP23B-203ENST00000482741 MLH3Q9UHC1 1453 aa12.35□□□□□ -0.43
TVP23B-203ENST00000482741 ATF5Q9Y2D1 282 aaPredicted RBP12.35□□□□□ -0.43
TVP23B-203ENST00000482741 GPATCH8Q9UKJ3 1502 aaKnown RBP12.34□□□□□ -0.43
TVP23B-203ENST00000482741 PTPRGP23470 1445 aa12.34□□□□□ -0.43
TVP23B-203ENST00000482741 FHOD3Q2V2M9 1422 aa12.34□□□□□ -0.43
TVP23B-203ENST00000482741 HRCP23327 699 aa12.34□□□□□ -0.43
TVP23B-203ENST00000482741 PLCH2O75038 1416 aa12.33□□□□□ -0.43
TVP23B-203ENST00000482741 ATP10AO60312 1499 aa12.33□□□□□ -0.44
TVP23B-203ENST00000482741 MYOM3Q5VTT5 1437 aa12.33□□□□□ -0.44
TVP23B-203ENST00000482741 KIAA1210Q9ULL0 1709 aa12.32□□□□□ -0.44
TVP23B-203ENST00000482741 TET3O43151 1660 aa12.32□□□□□ -0.44
TVP23B-203ENST00000482741 CEP152O94986 1710 aa12.31□□□□□ -0.44
TVP23B-203ENST00000482741 ABCA6Q8N139 1617 aa12.3□□□□□ -0.44
TVP23B-203ENST00000482741 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
TVP23B-203ENST00000482741 TEX14Q8IWB6 1497 aa12.3□□□□□ -0.44
TVP23B-203ENST00000482741 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
TVP23B-203ENST00000482741 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
TVP23B-203ENST00000482741 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
TVP23B-203ENST00000482741 APLP2Q06481 763 aa12.29□□□□□ -0.44
TVP23B-203ENST00000482741 SIGLEC1Q9BZZ2 1709 aa12.27□□□□□ -0.45
TVP23B-203ENST00000482741 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms