RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 ARHGAP5Q13017 1502 aa26.19■■□□□ 1.78
SF1-215ENST00000482693 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
SF1-215ENST00000482693 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
SF1-215ENST00000482693 CFDP1Q9UEE9 299 aaPredicted RBP26.16■■□□□ 1.78
SF1-215ENST00000482693 PREX2Q70Z35 1606 aa26.16■■□□□ 1.78
SF1-215ENST00000482693 SUPT6HQ7KZ85 1726 aaKnown RBP26.16■■□□□ 1.78
SF1-215ENST00000482693 DENND4BO75064 1496 aaPredicted RBP26.13■■□□□ 1.77
SF1-215ENST00000482693 ADGRL1O94910 1474 aa26.13■■□□□ 1.77
SF1-215ENST00000482693 RAPGEF3O95398 923 aa26.13■■□□□ 1.77
SF1-215ENST00000482693 CDC42BPAQ5VT25 1732 aa26.13■■□□□ 1.77
SF1-215ENST00000482693 CDC42BPBQ9Y5S2 1711 aa26.13■■□□□ 1.77
SF1-215ENST00000482693 SCAPERQ9BY12 1400 aa26.12■■□□□ 1.77
SF1-215ENST00000482693 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
SF1-215ENST00000482693 ITSN2Q9NZM3 1697 aa26.04■■□□□ 1.76
SF1-215ENST00000482693 POGZQ7Z3K3 1410 aa26.04■■□□□ 1.76
SF1-215ENST00000482693 PLEKHH2Q8IVE3 1493 aa26.03■■□□□ 1.76
SF1-215ENST00000482693 KIAA1107Q9UPP5 1409 aa26.02■■□□□ 1.76
SF1-215ENST00000482693 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
SF1-215ENST00000482693 ABCC1P33527 1531 aa26■■□□□ 1.75
SF1-215ENST00000482693 SAMD9LQ8IVG5 1584 aa25.99■■□□□ 1.75
SF1-215ENST00000482693 ZNF518AQ6AHZ1 1483 aa25.99■■□□□ 1.75
SF1-215ENST00000482693 MYOM3Q5VTT5 1437 aa25.99■■□□□ 1.75
SF1-215ENST00000482693 AFAP1Q8N556 730 aa25.99■■□□□ 1.75
SF1-215ENST00000482693 RICTORQ6R327 1708 aa25.99■■□□□ 1.75
SF1-215ENST00000482693 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
SF1-215ENST00000482693 ZNF644Q9H582 1327 aaPredicted RBP25.98■■□□□ 1.75
SF1-215ENST00000482693 MIA2Q96PC5 1412 aa25.97■■□□□ 1.75
SF1-215ENST00000482693 HNRNPMP52272 730 aaKnown RBP eCLIP25.97■■□□□ 1.75
SF1-215ENST00000482693 MAGI2Q86UL8 1455 aa25.96■■□□□ 1.75
SF1-215ENST00000482693 ZMYM4Q5VZL5 1548 aa25.95■■□□□ 1.74
SF1-215ENST00000482693 TRAPPC8Q9Y2L5 1435 aa25.95■■□□□ 1.74
SF1-215ENST00000482693 SYCP2Q9BX26 1530 aa25.92■■□□□ 1.74
SF1-215ENST00000482693 RSPH4AQ5TD94 716 aa25.91■■□□□ 1.74
SF1-215ENST00000482693 CAMSAP2Q08AD1 1489 aa25.91■■□□□ 1.74
SF1-215ENST00000482693 KDM5CP41229 1560 aa25.9■■□□□ 1.74
SF1-215ENST00000482693 MBD5Q9P267 1494 aa25.89■■□□□ 1.73
SF1-215ENST00000482693 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
SF1-215ENST00000482693 MLH3Q9UHC1 1453 aa25.87■■□□□ 1.73
SF1-215ENST00000482693 MYT1LQ9UL68 1186 aa25.87■■□□□ 1.73
SF1-215ENST00000482693 ZFYVE16Q7Z3T8 1539 aa25.87■■□□□ 1.73
SF1-215ENST00000482693 FGD6Q6ZV73 1430 aa25.86■■□□□ 1.73
SF1-215ENST00000482693 SPAG9O60271 1321 aaKnown RBP25.86■■□□□ 1.73
SF1-215ENST00000482693 YEATS2Q9ULM3 1422 aa25.85■■□□□ 1.73
SF1-215ENST00000482693 ARHGEF40Q8TER5 1519 aa25.83■■□□□ 1.73
SF1-215ENST00000482693 HECW2Q9P2P5 1572 aa25.82■■□□□ 1.72
SF1-215ENST00000482693 ATP10AO60312 1499 aa25.8■■□□□ 1.72
SF1-215ENST00000482693 CCDC141Q6ZP82 1450 aa25.8■■□□□ 1.72
SF1-215ENST00000482693 ARHGEF5Q12774 1597 aa25.79■■□□□ 1.72
SF1-215ENST00000482693 TSPY4P0CV99 314 aa25.79■■□□□ 1.72
SF1-215ENST00000482693 TSPY10P0CW01 314 aa25.79■■□□□ 1.72
SF1-215ENST00000482693 TCOF1Q13428 1488 aaKnown RBP25.79■■□□□ 1.72
SF1-215ENST00000482693 PTPN23Q9H3S7 1636 aa25.78■■□□□ 1.72
SF1-215ENST00000482693 RTEL1-TNFRSF6BF6WH68 1400 aa25.77■■□□□ 1.72
SF1-215ENST00000482693 C9orf84Q5VXU9 1444 aa25.74■■□□□ 1.71
SF1-215ENST00000482693 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
SF1-215ENST00000482693 ATP7AQ04656 1500 aa25.73■■□□□ 1.71
SF1-215ENST00000482693 KIDINS220Q9ULH0 1771 aa25.73■■□□□ 1.71
SF1-215ENST00000482693 FAM50AQ14320 339 aaKnown RBP25.72■■□□□ 1.71
SF1-215ENST00000482693 INO80Q9ULG1 1556 aaPredicted RBP25.72■■□□□ 1.71
SF1-215ENST00000482693 DIP2CQ9Y2E4 1556 aa25.72■■□□□ 1.71
SF1-215ENST00000482693 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
SF1-215ENST00000482693 KDM4FA0A1W2PPD8 638 aa25.68■■□□□ 1.7
SF1-215ENST00000482693 ABCC5O15440 1437 aa25.68■■□□□ 1.7
SF1-215ENST00000482693 REREQ9P2R6 1566 aa25.68■■□□□ 1.7
SF1-215ENST00000482693 DAPK1P53355 1430 aa25.65■■□□□ 1.7
SF1-215ENST00000482693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.65■■□□□ 1.7
SF1-215ENST00000482693 MAST1Q9Y2H9 1570 aa25.64■■□□□ 1.69
SF1-215ENST00000482693 SHANK2Q9UPX8 1470 aa25.63■■□□□ 1.69
SF1-215ENST00000482693 DNMT1P26358 1616 aaKnown RBP25.63■■□□□ 1.69
SF1-215ENST00000482693 A2MP01023 1474 aa25.62■■□□□ 1.69
SF1-215ENST00000482693 AGLP35573 1532 aa25.61■■□□□ 1.69
SF1-215ENST00000482693 DHX29Q7Z478 1369 aaKnown RBP25.6■■□□□ 1.69
SF1-215ENST00000482693 RRBP1Q9P2E9 1410 aaKnown RBP25.6■■□□□ 1.69
SF1-215ENST00000482693 SIGLEC1Q9BZZ2 1709 aa25.59■■□□□ 1.69
SF1-215ENST00000482693 ADGBQ8N7X0 1667 aa25.58■■□□□ 1.68
SF1-215ENST00000482693 MLECQ14165 292 aa25.57■■□□□ 1.68
SF1-215ENST00000482693 BCORL1Q5H9F3 1711 aa25.57■■□□□ 1.68
SF1-215ENST00000482693 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
SF1-215ENST00000482693 CHIC2Q9UKJ5 165 aa25.55■■□□□ 1.68
SF1-215ENST00000482693 PLXNC1O60486 1568 aa25.55■■□□□ 1.68
SF1-215ENST00000482693 ANKRD30AQ9BXX3 1397 aa25.54■■□□□ 1.68
SF1-215ENST00000482693 ADAMTSL3P82987 1691 aa25.53■■□□□ 1.68
SF1-215ENST00000482693 RRP7BPQ9NSQ0 103 aa25.52■■□□□ 1.68
SF1-215ENST00000482693 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
SF1-215ENST00000482693 KIF15Q9NS87 1388 aa25.51■■□□□ 1.67
SF1-215ENST00000482693 NCOA1Q15788 1441 aa25.51■■□□□ 1.67
SF1-215ENST00000482693 ADGRL2O95490 1459 aa25.49■■□□□ 1.67
SF1-215ENST00000482693 PTPRKQ15262 1439 aa25.48■■□□□ 1.67
SF1-215ENST00000482693 ITGAEP38570 1179 aa25.48■■□□□ 1.67
SF1-215ENST00000482693 DUOX2Q9NRD8 1548 aa25.47■■□□□ 1.67
SF1-215ENST00000482693 KIF3BO15066 747 aa25.47■■□□□ 1.67
SF1-215ENST00000482693 PPP6R1Q9UPN7 881 aa25.47■■□□□ 1.67
SF1-215ENST00000482693 ROCK1Q13464 1354 aa25.45■■□□□ 1.67
SF1-215ENST00000482693 GGT6Q6P531 493 aa25.45■■□□□ 1.66
SF1-215ENST00000482693 ESF1Q9H501 851 aaKnown RBP25.45■■□□□ 1.66
SF1-215ENST00000482693 MADDQ8WXG6 1647 aa25.44■■□□□ 1.66
SF1-215ENST00000482693 ERBINQ96RT1 1412 aa25.42■■□□□ 1.66
SF1-215ENST00000482693 PTPRMP28827 1452 aa25.41■■□□□ 1.66
SF1-215ENST00000482693 CNTLNQ9NXG0 1405 aa25.39■■□□□ 1.66
SF1-215ENST00000482693 EIF2AK4Q9P2K8 1649 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms