RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 NEO1Q92859 1461 aa7.04□□□□□ -1.28
SHANK2-216ENST00000482659 KANK4Q5T7N3 995 aaPredicted RBP7.04□□□□□ -1.28
SHANK2-216ENST00000482659 PCF11O94913 1555 aaKnown RBP7.03□□□□□ -1.28
SHANK2-216ENST00000482659 ZNF777Q9ULD5 760 aaPredicted RBP7.03□□□□□ -1.28
SHANK2-216ENST00000482659 FANCAO15360 1455 aa7.03□□□□□ -1.28
SHANK2-216ENST00000482659 AKNAQ7Z591 1439 aa7.02□□□□□ -1.29
SHANK2-216ENST00000482659 RAPGEF3O95398 923 aa7.02□□□□□ -1.29
SHANK2-216ENST00000482659 LRRC9Q6ZRR7 1453 aa7.02□□□□□ -1.29
SHANK2-216ENST00000482659 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.01□□□□□ -1.29
SHANK2-216ENST00000482659 ARAP3Q8WWN8 1544 aa7.01□□□□□ -1.29
SHANK2-216ENST00000482659 DENND4BO75064 1496 aaPredicted RBP7.01□□□□□ -1.29
SHANK2-216ENST00000482659 DCAF8L1A6NGE4 600 aa7.01□□□□□ -1.29
SHANK2-216ENST00000482659 ABCA9Q8IUA7 1624 aa7.01□□□□□ -1.29
SHANK2-216ENST00000482659 GPATCH8Q9UKJ3 1502 aaKnown RBP7.01□□□□□ -1.29
SHANK2-216ENST00000482659 SCAPERQ9BY12 1400 aa7.01□□□□□ -1.29
SHANK2-216ENST00000482659 MYT1LQ9UL68 1186 aa7□□□□□ -1.29
SHANK2-216ENST00000482659 KIF14Q15058 1648 aa7□□□□□ -1.29
SHANK2-216ENST00000482659 EHBP1L1Q8N3D4 1523 aa7□□□□□ -1.29
SHANK2-216ENST00000482659 KIAA1107Q9UPP5 1409 aa7□□□□□ -1.29
SHANK2-216ENST00000482659 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 MAP3K4Q9Y6R4 1608 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 TSPY4P0CV99 314 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 TSPY10P0CW01 314 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 AFAP1Q8N556 730 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 MIA2Q96PC5 1412 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 TIAM1Q13009 1591 aa6.99□□□□□ -1.29
SHANK2-216ENST00000482659 ADGRL1O94910 1474 aa6.98□□□□□ -1.29
SHANK2-216ENST00000482659 NCOA2Q15596 1464 aa6.98□□□□□ -1.29
SHANK2-216ENST00000482659 COL17A1Q9UMD9 1497 aaPredicted RBP6.98□□□□□ -1.29
SHANK2-216ENST00000482659 ARHGAP5Q13017 1502 aa6.98□□□□□ -1.29
SHANK2-216ENST00000482659 CFAP43Q8NDM7 1665 aa6.98□□□□□ -1.29
SHANK2-216ENST00000482659 HNRNPMP52272 730 aaKnown RBP eCLIP6.98□□□□□ -1.296e-7■■■□□ 19.1
SHANK2-216ENST00000482659 MAGI2Q86UL8 1455 aa6.98□□□□□ -1.29
SHANK2-216ENST00000482659 SPAG9O60271 1321 aaKnown RBP6.97□□□□□ -1.29
SHANK2-216ENST00000482659 MYOM3Q5VTT5 1437 aa6.96□□□□□ -1.3
SHANK2-216ENST00000482659 KDM6BO15054 1643 aa6.96□□□□□ -1.3
SHANK2-216ENST00000482659 ZNF518AQ6AHZ1 1483 aa6.96□□□□□ -1.3
SHANK2-216ENST00000482659 ZNF644Q9H582 1327 aaPredicted RBP6.96□□□□□ -1.3
SHANK2-216ENST00000482659 POGZQ7Z3K3 1410 aa6.95□□□□□ -1.3
SHANK2-216ENST00000482659 ARID4BQ4LE39 1312 aaPredicted RBP6.95□□□□□ -1.3
SHANK2-216ENST00000482659 TTC37Q6PGP7 1564 aa6.95□□□□□ -1.3
SHANK2-216ENST00000482659 CFAP74Q9C0B2 1584 aa6.95□□□□□ -1.3
SHANK2-216ENST00000482659 MLH3Q9UHC1 1453 aa6.93□□□□□ -1.3
SHANK2-216ENST00000482659 KIF13AQ9H1H9 1805 aa6.93□□□□□ -1.3
SHANK2-216ENST00000482659 FAM50AQ14320 339 aaKnown RBP6.93□□□□□ -1.3
SHANK2-216ENST00000482659 RTEL1-TNFRSF6BF6WH68 1400 aa6.93□□□□□ -1.3
SHANK2-216ENST00000482659 TRAPPC8Q9Y2L5 1435 aa6.93□□□□□ -1.3
SHANK2-216ENST00000482659 PPARGC1BQ86YN6 1023 aaKnown RBP6.92□□□□□ -1.3
SHANK2-216ENST00000482659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.92□□□□□ -1.3
SHANK2-216ENST00000482659 FGD6Q6ZV73 1430 aa6.92□□□□□ -1.3
SHANK2-216ENST00000482659 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
SHANK2-216ENST00000482659 ESF1Q9H501 851 aaKnown RBP6.91□□□□□ -1.3
SHANK2-216ENST00000482659 ATP10AO60312 1499 aa6.91□□□□□ -1.3
SHANK2-216ENST00000482659 ARHGEF12Q9NZN5 1544 aa6.91□□□□□ -1.3
SHANK2-216ENST00000482659 SUPT6HQ7KZ85 1726 aaKnown RBP6.9□□□□□ -1.3
SHANK2-216ENST00000482659 CCDC141Q6ZP82 1450 aa6.9□□□□□ -1.31
SHANK2-216ENST00000482659 ABCC1P33527 1531 aa6.9□□□□□ -1.31
SHANK2-216ENST00000482659 PPRC1Q5VV67 1664 aaKnown RBP6.9□□□□□ -1.31
SHANK2-216ENST00000482659 DHX29Q7Z478 1369 aaKnown RBP6.89□□□□□ -1.31
SHANK2-216ENST00000482659 C9orf84Q5VXU9 1444 aa6.89□□□□□ -1.31
SHANK2-216ENST00000482659 YEATS2Q9ULM3 1422 aa6.89□□□□□ -1.31
SHANK2-216ENST00000482659 CAMSAP2Q08AD1 1489 aa6.89□□□□□ -1.31
SHANK2-216ENST00000482659 PREX2Q70Z35 1606 aa6.89□□□□□ -1.31
SHANK2-216ENST00000482659 ZMYM4Q5VZL5 1548 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 ZFYVE16Q7Z3T8 1539 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 TCOF1Q13428 1488 aaKnown RBP6.88□□□□□ -1.31
SHANK2-216ENST00000482659 ANKRD30AQ9BXX3 1397 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 KDM4FA0A1W2PPD8 638 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 SLC4A2P04920 1241 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 RRP7BPQ9NSQ0 103 aa6.88□□□□□ -1.31
SHANK2-216ENST00000482659 SAMD9LQ8IVG5 1584 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 SYCP2Q9BX26 1530 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 ABCC5O15440 1437 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 KIF3BO15066 747 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 ZBTB22O15209 634 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 MLECQ14165 292 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 LRRIQ1Q96JM4 1722 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 MYO5CQ9NQX4 1742 aa6.87□□□□□ -1.31
SHANK2-216ENST00000482659 KDM5CP41229 1560 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 A2MP01023 1474 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 DAPK1P53355 1430 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 TSPOAP1O95153 1857 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 ACIN1Q9UKV3 1341 aaKnown RBP6.86□□□□□ -1.31
SHANK2-216ENST00000482659 ITGAEP38570 1179 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 GGT6Q6P531 493 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 FOXD4L1Q9NU39 408 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
SHANK2-216ENST00000482659 RRBP1Q9P2E9 1410 aaKnown RBP6.85□□□□□ -1.31
SHANK2-216ENST00000482659 ROCK1Q13464 1354 aa6.85□□□□□ -1.31
SHANK2-216ENST00000482659 ITSN2Q9NZM3 1697 aa6.85□□□□□ -1.31
SHANK2-216ENST00000482659 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.85□□□□□ -1.31
SHANK2-216ENST00000482659 SHANK2Q9UPX8 1470 aa6.85□□□□□ -1.31
SHANK2-216ENST00000482659 NCOA1Q15788 1441 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 KIF15Q9NS87 1388 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 WASHC2CQ9Y4E1 1318 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 ARHGEF5Q12774 1597 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 FRMPD1Q5SYB0 1578 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 AGLP35573 1532 aa6.84□□□□□ -1.31
SHANK2-216ENST00000482659 HECW2Q9P2P5 1572 aa6.83□□□□□ -1.32
SHANK2-216ENST00000482659 ATP7AQ04656 1500 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms