RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 DENND4BO75064 1496 aaPredicted RBP32.8■■■□□ 2.84
SEC13-217ENST00000482647 LRRC9Q6ZRR7 1453 aa32.8■■■□□ 2.84
SEC13-217ENST00000482647 GPATCH8Q9UKJ3 1502 aaKnown RBP32.79■■■□□ 2.84
SEC13-217ENST00000482647 KANK4Q5T7N3 995 aaPredicted RBP32.79■■■□□ 2.84
SEC13-217ENST00000482647 ADGRL1O94910 1474 aa32.79■■■□□ 2.84
SEC13-217ENST00000482647 SCAPERQ9BY12 1400 aa32.77■■■□□ 2.84
SEC13-217ENST00000482647 CFDP1Q9UEE9 299 aaPredicted RBP32.77■■■□□ 2.84
SEC13-217ENST00000482647 PREX2Q70Z35 1606 aa32.73■■■□□ 2.83
SEC13-217ENST00000482647 ZNF777Q9ULD5 760 aaPredicted RBP32.73■■■□□ 2.83
SEC13-217ENST00000482647 NCOA2Q15596 1464 aa32.72■■■□□ 2.83
SEC13-217ENST00000482647 CDC42BPBQ9Y5S2 1711 aa32.71■■■□□ 2.83
SEC13-217ENST00000482647 CDC42BPAQ5VT25 1732 aa32.69■■■□□ 2.82
SEC13-217ENST00000482647 SUPT6HQ7KZ85 1726 aaKnown RBP32.68■■■□□ 2.82
SEC13-217ENST00000482647 POGZQ7Z3K3 1410 aa32.66■■■□□ 2.82
SEC13-217ENST00000482647 FRMPD1Q5SYB0 1578 aa32.64■■■□□ 2.82
SEC13-217ENST00000482647 AFAP1Q8N556 730 aa32.62■■■□□ 2.81
SEC13-217ENST00000482647 RICTORQ6R327 1708 aa32.6■■■□□ 2.81
SEC13-217ENST00000482647 ZNF518AQ6AHZ1 1483 aa32.59■■■□□ 2.81
SEC13-217ENST00000482647 ABCC1P33527 1531 aa32.57■■■□□ 2.8
SEC13-217ENST00000482647 PLEKHH2Q8IVE3 1493 aa32.57■■■□□ 2.8
SEC13-217ENST00000482647 KIAA1107Q9UPP5 1409 aa32.57■■■□□ 2.8
SEC13-217ENST00000482647 ARHGEF12Q9NZN5 1544 aa32.56■■■□□ 2.8
SEC13-217ENST00000482647 HNRNPMP52272 730 aaKnown RBP eCLIP32.56■■■□□ 2.8
SEC13-217ENST00000482647 ITSN2Q9NZM3 1697 aa32.56■■■□□ 2.8
SEC13-217ENST00000482647 MAGI2Q86UL8 1455 aa32.55■■■□□ 2.8
SEC13-217ENST00000482647 ZNF644Q9H582 1327 aaPredicted RBP32.55■■■□□ 2.8
SEC13-217ENST00000482647 ZMYM4Q5VZL5 1548 aa32.55■■■□□ 2.8
SEC13-217ENST00000482647 SAMD9LQ8IVG5 1584 aa32.54■■■□□ 2.8
SEC13-217ENST00000482647 TRAPPC8Q9Y2L5 1435 aa32.53■■■□□ 2.8
SEC13-217ENST00000482647 MYT1LQ9UL68 1186 aa32.52■■■□□ 2.8
SEC13-217ENST00000482647 MYOM3Q5VTT5 1437 aa32.48■■■□□ 2.79
SEC13-217ENST00000482647 ZFYVE16Q7Z3T8 1539 aa32.47■■■□□ 2.79
SEC13-217ENST00000482647 SYCP2Q9BX26 1530 aa32.47■■■□□ 2.79
SEC13-217ENST00000482647 KDM5CP41229 1560 aa32.46■■■□□ 2.79
SEC13-217ENST00000482647 YEATS2Q9ULM3 1422 aa32.46■■■□□ 2.79
SEC13-217ENST00000482647 MIA2Q96PC5 1412 aa32.44■■■□□ 2.78
SEC13-217ENST00000482647 MLH3Q9UHC1 1453 aa32.43■■■□□ 2.78
SEC13-217ENST00000482647 ARHGEF40Q8TER5 1519 aa32.43■■■□□ 2.78
SEC13-217ENST00000482647 RSPH4AQ5TD94 716 aa32.42■■■□□ 2.78
SEC13-217ENST00000482647 SPAG9O60271 1321 aaKnown RBP32.42■■■□□ 2.78
SEC13-217ENST00000482647 ARID4BQ4LE39 1312 aaPredicted RBP32.41■■■□□ 2.78
SEC13-217ENST00000482647 CAMSAP2Q08AD1 1489 aa32.41■■■□□ 2.78
SEC13-217ENST00000482647 KDM4FA0A1W2PPD8 638 aa32.4■■■□□ 2.78
SEC13-217ENST00000482647 MBD5Q9P267 1494 aa32.4■■■□□ 2.78
SEC13-217ENST00000482647 ATP10AO60312 1499 aa32.38■■■□□ 2.77
SEC13-217ENST00000482647 HECW2Q9P2P5 1572 aa32.36■■■□□ 2.77
SEC13-217ENST00000482647 AEBP2Q6ZN18 517 aaPredicted RBP32.32■■■□□ 2.76
SEC13-217ENST00000482647 PPARGC1BQ86YN6 1023 aaKnown RBP32.32■■■□□ 2.76
SEC13-217ENST00000482647 C9orf84Q5VXU9 1444 aa32.32■■■□□ 2.76
SEC13-217ENST00000482647 TSPY4P0CV99 314 aa32.3■■■□□ 2.76
SEC13-217ENST00000482647 TSPY10P0CW01 314 aa32.3■■■□□ 2.76
SEC13-217ENST00000482647 FGD6Q6ZV73 1430 aa32.3■■■□□ 2.76
SEC13-217ENST00000482647 CCDC141Q6ZP82 1450 aa32.29■■■□□ 2.76
SEC13-217ENST00000482647 RTEL1-TNFRSF6BF6WH68 1400 aa32.25■■■□□ 2.75
SEC13-217ENST00000482647 DIP2CQ9Y2E4 1556 aa32.24■■■□□ 2.75
SEC13-217ENST00000482647 ATP7AQ04656 1500 aa32.24■■■□□ 2.75
SEC13-217ENST00000482647 KIDINS220Q9ULH0 1771 aa32.24■■■□□ 2.75
SEC13-217ENST00000482647 ARHGEF5Q12774 1597 aa32.24■■■□□ 2.75
SEC13-217ENST00000482647 ABCA6Q8N139 1617 aa32.22■■■□□ 2.75
SEC13-217ENST00000482647 PTPN23Q9H3S7 1636 aa32.21■■■□□ 2.75
SEC13-217ENST00000482647 INO80Q9ULG1 1556 aaPredicted RBP32.19■■■□□ 2.74
SEC13-217ENST00000482647 TCOF1Q13428 1488 aaKnown RBP32.19■■■□□ 2.74
SEC13-217ENST00000482647 MLECQ14165 292 aa32.18■■■□□ 2.74
SEC13-217ENST00000482647 REREQ9P2R6 1566 aa32.18■■■□□ 2.74
SEC13-217ENST00000482647 FAM50AQ14320 339 aaKnown RBP32.16■■■□□ 2.74
SEC13-217ENST00000482647 BCORL1Q5H9F3 1711 aa32.12■■■□□ 2.73
SEC13-217ENST00000482647 SIGLEC1Q9BZZ2 1709 aa32.12■■■□□ 2.73
SEC13-217ENST00000482647 A2MP01023 1474 aa32.12■■■□□ 2.73
SEC13-217ENST00000482647 ABCC5O15440 1437 aa32.11■■■□□ 2.73
SEC13-217ENST00000482647 AGLP35573 1532 aa32.1■■■□□ 2.73
SEC13-217ENST00000482647 ADAMTSL3P82987 1691 aa32.08■■■□□ 2.73
SEC13-217ENST00000482647 DHX29Q7Z478 1369 aaKnown RBP32.07■■■□□ 2.73
SEC13-217ENST00000482647 DAPK1P53355 1430 aa32.07■■■□□ 2.72
SEC13-217ENST00000482647 MAST1Q9Y2H9 1570 aa32.05■■■□□ 2.72
SEC13-217ENST00000482647 SHANK2Q9UPX8 1470 aa32.03■■■□□ 2.72
SEC13-217ENST00000482647 ADGBQ8N7X0 1667 aa32.02■■■□□ 2.72
SEC13-217ENST00000482647 PLXNC1O60486 1568 aa32.01■■■□□ 2.71
SEC13-217ENST00000482647 DNMT1P26358 1616 aaKnown RBP32■■■□□ 2.71
SEC13-217ENST00000482647 ESF1Q9H501 851 aaKnown RBP31.99■■■□□ 2.71
SEC13-217ENST00000482647 CHIC2Q9UKJ5 165 aa31.99■■■□□ 2.71
SEC13-217ENST00000482647 MADDQ8WXG6 1647 aa31.99■■■□□ 2.71
SEC13-217ENST00000482647 PTPRMP28827 1452 aa31.98■■■□□ 2.71
SEC13-217ENST00000482647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.97■■■□□ 2.71
SEC13-217ENST00000482647 GGT6Q6P531 493 aa31.96■■■□□ 2.71
SEC13-217ENST00000482647 RRP7BPQ9NSQ0 103 aa31.96■■■□□ 2.71
SEC13-217ENST00000482647 KIF3BO15066 747 aa31.95■■■□□ 2.71
SEC13-217ENST00000482647 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
SEC13-217ENST00000482647 KIF15Q9NS87 1388 aa31.93■■■□□ 2.7
SEC13-217ENST00000482647 PPP6R1Q9UPN7 881 aa31.92■■■□□ 2.7
SEC13-217ENST00000482647 CROCC2H7BZ55 1655 aa31.92■■■□□ 2.7
SEC13-217ENST00000482647 RRBP1Q9P2E9 1410 aaKnown RBP31.9■■■□□ 2.7
SEC13-217ENST00000482647 NCOA1Q15788 1441 aa31.89■■■□□ 2.7
SEC13-217ENST00000482647 RIMS1Q86UR5 1692 aaKnown RBP31.88■■■□□ 2.69
SEC13-217ENST00000482647 DUOX2Q9NRD8 1548 aa31.87■■■□□ 2.69
SEC13-217ENST00000482647 ITGAEP38570 1179 aa31.87■■■□□ 2.69
SEC13-217ENST00000482647 PLPPR3Q6T4P5 718 aa31.87■■■□□ 2.69
SEC13-217ENST00000482647 FER1L4A9Z1Z3 1794 aa31.86■■■□□ 2.69
SEC13-217ENST00000482647 CNTLNQ9NXG0 1405 aa31.86■■■□□ 2.69
SEC13-217ENST00000482647 ADGRL2O95490 1459 aa31.84■■■□□ 2.69
SEC13-217ENST00000482647 PTPRKQ15262 1439 aa31.83■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms