RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 ARHGEF40Q8TER5 1519 aa15.77■□□□□ 0.11
TMEM39A-207ENST00000482162 YEATS2Q9ULM3 1422 aa15.77■□□□□ 0.11
TMEM39A-207ENST00000482162 MYO5CQ9NQX4 1742 aa15.75■□□□□ 0.11
TMEM39A-207ENST00000482162 PTPRMP28827 1452 aa15.74■□□□□ 0.11
TMEM39A-207ENST00000482162 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
TMEM39A-207ENST00000482162 HECW2Q9P2P5 1572 aa15.73■□□□□ 0.11
TMEM39A-207ENST00000482162 BCORL1Q5H9F3 1711 aa15.73■□□□□ 0.11
TMEM39A-207ENST00000482162 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
TMEM39A-207ENST00000482162 AFAP1Q8N556 730 aa15.72■□□□□ 0.11
TMEM39A-207ENST00000482162 ARID4BQ4LE39 1312 aaPredicted RBP15.71■□□□□ 0.11
TMEM39A-207ENST00000482162 ARHGAP5Q13017 1502 aa15.71■□□□□ 0.11
TMEM39A-207ENST00000482162 ATP10AO60312 1499 aa15.71■□□□□ 0.1
TMEM39A-207ENST00000482162 CDC42BPBQ9Y5S2 1711 aa15.7■□□□□ 0.1
TMEM39A-207ENST00000482162 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
TMEM39A-207ENST00000482162 KDM5CP41229 1560 aa15.7■□□□□ 0.1
TMEM39A-207ENST00000482162 ARHGEF12Q9NZN5 1544 aa15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 SIGLEC1Q9BZZ2 1709 aa15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 MLH3Q9UHC1 1453 aa15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 PREX2Q70Z35 1606 aa15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 CEP162Q5TB80 1403 aa15.68■□□□□ 0.1
TMEM39A-207ENST00000482162 TRAPPC8Q9Y2L5 1435 aa15.67■□□□□ 0.1
TMEM39A-207ENST00000482162 MADDQ8WXG6 1647 aa15.66■□□□□ 0.1
TMEM39A-207ENST00000482162 C9orf84Q5VXU9 1444 aa15.66■□□□□ 0.1
TMEM39A-207ENST00000482162 ABCC1P33527 1531 aa15.64■□□□□ 0.09
TMEM39A-207ENST00000482162 CDC42BPAQ5VT25 1732 aa15.64■□□□□ 0.09
TMEM39A-207ENST00000482162 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
TMEM39A-207ENST00000482162 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
TMEM39A-207ENST00000482162 REREQ9P2R6 1566 aa15.62■□□□□ 0.09
TMEM39A-207ENST00000482162 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
TMEM39A-207ENST00000482162 DIP2CQ9Y2E4 1556 aa15.59■□□□□ 0.09
TMEM39A-207ENST00000482162 CFDP1Q9UEE9 299 aaPredicted RBP15.59■□□□□ 0.09
TMEM39A-207ENST00000482162 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
TMEM39A-207ENST00000482162 AGLP35573 1532 aa15.58■□□□□ 0.09
TMEM39A-207ENST00000482162 SAMD9LQ8IVG5 1584 aa15.58■□□□□ 0.09
TMEM39A-207ENST00000482162 ITSN2Q9NZM3 1697 aa15.58■□□□□ 0.08
TMEM39A-207ENST00000482162 MLECQ14165 292 aa15.58■□□□□ 0.08
TMEM39A-207ENST00000482162 PLEKHH2Q8IVE3 1493 aa15.58■□□□□ 0.08
TMEM39A-207ENST00000482162 LMTK3Q96Q04 1460 aa15.58■□□□□ 0.08
TMEM39A-207ENST00000482162 RIMS1Q86UR5 1692 aaKnown RBP15.57■□□□□ 0.08
TMEM39A-207ENST00000482162 HNRNPMP52272 730 aaKnown RBP eCLIP15.57■□□□□ 0.088e-7■■■□□ 16.7
TMEM39A-207ENST00000482162 ZNF777Q9ULD5 760 aaPredicted RBP15.56■□□□□ 0.08
TMEM39A-207ENST00000482162 KIDINS220Q9ULH0 1771 aa15.56■□□□□ 0.08
TMEM39A-207ENST00000482162 ABCA6Q8N139 1617 aa15.55■□□□□ 0.08
TMEM39A-207ENST00000482162 EHBP1L1Q8N3D4 1523 aa15.55■□□□□ 0.08
TMEM39A-207ENST00000482162 SPAG9O60271 1321 aaKnown RBP15.54■□□□□ 0.08
TMEM39A-207ENST00000482162 MBD5Q9P267 1494 aa15.53■□□□□ 0.08
TMEM39A-207ENST00000482162 VPS8Q8N3P4 1428 aa15.53■□□□□ 0.08
TMEM39A-207ENST00000482162 ZNF644Q9H582 1327 aaPredicted RBP15.53■□□□□ 0.08
TMEM39A-207ENST00000482162 SYCP2Q9BX26 1530 aa15.53■□□□□ 0.08
TMEM39A-207ENST00000482162 MYT1LQ9UL68 1186 aa15.52■□□□□ 0.08
TMEM39A-207ENST00000482162 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
TMEM39A-207ENST00000482162 FER1L4A9Z1Z3 1794 aa15.51■□□□□ 0.07
TMEM39A-207ENST00000482162 MAP3K1Q13233 1512 aa15.49■□□□□ 0.07
TMEM39A-207ENST00000482162 NCOA2Q15596 1464 aa15.49■□□□□ 0.07
TMEM39A-207ENST00000482162 CEBPAP49715 358 aaPredicted RBP15.49■□□□□ 0.07
TMEM39A-207ENST00000482162 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
TMEM39A-207ENST00000482162 RTEL1-TNFRSF6BF6WH68 1400 aa15.47■□□□□ 0.07
TMEM39A-207ENST00000482162 RSPH4AQ5TD94 716 aa15.47■□□□□ 0.07
TMEM39A-207ENST00000482162 INO80Q9ULG1 1556 aaPredicted RBP15.47■□□□□ 0.07
TMEM39A-207ENST00000482162 ATP7AQ04656 1500 aa15.47■□□□□ 0.07
TMEM39A-207ENST00000482162 LRRC9Q6ZRR7 1453 aa15.46■□□□□ 0.07
TMEM39A-207ENST00000482162 HSPA2P54652 639 aa15.46■□□□□ 0.07
TMEM39A-207ENST00000482162 PLXNC1O60486 1568 aa15.45■□□□□ 0.06
TMEM39A-207ENST00000482162 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
TMEM39A-207ENST00000482162 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
TMEM39A-207ENST00000482162 A2MP01023 1474 aa15.45■□□□□ 0.06
TMEM39A-207ENST00000482162 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
TMEM39A-207ENST00000482162 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
TMEM39A-207ENST00000482162 SUPT6HQ7KZ85 1726 aaKnown RBP15.43■□□□□ 0.06
TMEM39A-207ENST00000482162 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
TMEM39A-207ENST00000482162 DHX29Q7Z478 1369 aaKnown RBP15.4■□□□□ 0.06
TMEM39A-207ENST00000482162 ESF1Q9H501 851 aaKnown RBP15.4■□□□□ 0.06
TMEM39A-207ENST00000482162 CAMSAP2Q08AD1 1489 aa15.4■□□□□ 0.06
TMEM39A-207ENST00000482162 C3P01024 1663 aa15.39■□□□□ 0.05
TMEM39A-207ENST00000482162 NPATQ14207 1427 aa15.39■□□□□ 0.05
TMEM39A-207ENST00000482162 CCDC141Q6ZP82 1450 aa15.39■□□□□ 0.05
TMEM39A-207ENST00000482162 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
TMEM39A-207ENST00000482162 ARHGEF5Q12774 1597 aa15.37■□□□□ 0.05
TMEM39A-207ENST00000482162 UHRF1BP1Q6BDS2 1440 aa15.37■□□□□ 0.05
TMEM39A-207ENST00000482162 MIA2Q96PC5 1412 aa15.37■□□□□ 0.05
TMEM39A-207ENST00000482162 MROH2AA6NES4 1674 aa15.36■□□□□ 0.05
TMEM39A-207ENST00000482162 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
TMEM39A-207ENST00000482162 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
TMEM39A-207ENST00000482162 GGT6Q6P531 493 aa15.35■□□□□ 0.05
TMEM39A-207ENST00000482162 MYOM3Q5VTT5 1437 aa15.34■□□□□ 0.05
TMEM39A-207ENST00000482162 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
TMEM39A-207ENST00000482162 TSPY4P0CV99 314 aa15.33■□□□□ 0.04
TMEM39A-207ENST00000482162 TSPY10P0CW01 314 aa15.33■□□□□ 0.04
TMEM39A-207ENST00000482162 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
TMEM39A-207ENST00000482162 STRCQ7RTU9 1775 aa15.31■□□□□ 0.04
TMEM39A-207ENST00000482162 KIF3BO15066 747 aa15.31■□□□□ 0.04
TMEM39A-207ENST00000482162 MAST1Q9Y2H9 1570 aa15.3■□□□□ 0.04
TMEM39A-207ENST00000482162 PTPRTO14522 1441 aa15.29■□□□□ 0.04
TMEM39A-207ENST00000482162 FAM135AQ9P2D6 1515 aa15.28■□□□□ 0.04
TMEM39A-207ENST00000482162 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
TMEM39A-207ENST00000482162 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
TMEM39A-207ENST00000482162 APLP2Q06481 763 aa15.27■□□□□ 0.04
TMEM39A-207ENST00000482162 CERKQ8TCT0 537 aa15.26■□□□□ 0.03
TMEM39A-207ENST00000482162 ABCC5O15440 1437 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms