RNA–Protein interactions for RNA: ENST00000482116.1

LMO7-210, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-210ENST00000482116 ZCCHC6Q5VYS8 1495 aaKnown RBP13.38□□□□□ -0.27
LMO7-210ENST00000482116 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
LMO7-210ENST00000482116 PPP1R37O75864 691 aa13.35□□□□□ -0.27
LMO7-210ENST00000482116 ST18O60284 1047 aa13.33□□□□□ -0.28
LMO7-210ENST00000482116 POTEMA6NI47 508 aa13.32□□□□□ -0.28
LMO7-210ENST00000482116 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
LMO7-210ENST00000482116 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
LMO7-210ENST00000482116 DCAF1Q9Y4B6 1507 aa13.31□□□□□ -0.28
LMO7-210ENST00000482116 LCE2DQ5TA82 110 aaPredicted RBP13.3□□□□□ -0.28
LMO7-210ENST00000482116 DOK7Q18PE1 504 aa13.29□□□□□ -0.28
LMO7-210ENST00000482116 TMC2Q8TDI7 906 aa13.29□□□□□ -0.28
LMO7-210ENST00000482116 ZNF710Q8N1W2 664 aa13.28□□□□□ -0.28
LMO7-210ENST00000482116 SCRIBQ14160 1630 aa13.28□□□□□ -0.28
LMO7-210ENST00000482116 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
LMO7-210ENST00000482116 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
LMO7-210ENST00000482116 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
LMO7-210ENST00000482116 BBXQ8WY36 941 aaPredicted RBP13.23□□□□□ -0.29
LMO7-210ENST00000482116 HOXB3P14651 431 aaPredicted RBP13.22□□□□□ -0.29
LMO7-210ENST00000482116 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
LMO7-210ENST00000482116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.2□□□□□ -0.3
LMO7-210ENST00000482116 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
LMO7-210ENST00000482116 KIF3CO14782 793 aa13.18□□□□□ -0.3
LMO7-210ENST00000482116 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
LMO7-210ENST00000482116 EMP3P54852 163 aa13.17□□□□□ -0.3
LMO7-210ENST00000482116 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
LMO7-210ENST00000482116 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
LMO7-210ENST00000482116 ZSWIM6Q9HCJ5 1215 aa13.14□□□□□ -0.31
LMO7-210ENST00000482116 HOXB1P14653 301 aaPredicted RBP13.12□□□□□ -0.31
LMO7-210ENST00000482116 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
LMO7-210ENST00000482116 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
LMO7-210ENST00000482116 SPRYD3Q8NCJ5 442 aa13.1□□□□□ -0.31
LMO7-210ENST00000482116 PDE4AP27815 886 aa13.07□□□□□ -0.32
LMO7-210ENST00000482116 FOXK1P85037 733 aa13.07□□□□□ -0.32
LMO7-210ENST00000482116 FAM205CA6NFA0 338 aa13.06□□□□□ -0.32
LMO7-210ENST00000482116 CDAN1Q8IWY9 1227 aa13.06□□□□□ -0.32
LMO7-210ENST00000482116 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
LMO7-210ENST00000482116 ARSIQ5FYB1 569 aa13.05□□□□□ -0.32
LMO7-210ENST00000482116 ERBB3P21860 1342 aa13.05□□□□□ -0.32
LMO7-210ENST00000482116 DSG2Q14126 1118 aa13.04□□□□□ -0.32
LMO7-210ENST00000482116 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
LMO7-210ENST00000482116 CFAP44Q96MT7 982 aa13.04□□□□□ -0.32
LMO7-210ENST00000482116 SLC34A2O95436 690 aa13.03□□□□□ -0.32
LMO7-210ENST00000482116 PAXIP1Q6ZW49 1069 aaPredicted RBP13.03□□□□□ -0.32
LMO7-210ENST00000482116 CRISPLD2Q9H0B8 497 aa13.03□□□□□ -0.32
LMO7-210ENST00000482116 HS3ST6Q96QI5 342 aa13.01□□□□□ -0.33
LMO7-210ENST00000482116 LARP6Q9BRS8 491 aaKnown RBP13□□□□□ -0.33
LMO7-210ENST00000482116 NCKAP5LQ9HCH0 1330 aa12.99□□□□□ -0.33
LMO7-210ENST00000482116 PPP1R15BQ5SWA1 713 aa12.99□□□□□ -0.33
LMO7-210ENST00000482116 PCDHGA4Q9Y5G9 962 aa12.99□□□□□ -0.33
LMO7-210ENST00000482116 KHSRPQ92945 711 aaKnown RBP eCLIP12.98□□□□□ -0.339e-7■■□□□ 13.7
LMO7-210ENST00000482116 TBC1D12O60347 775 aa12.97□□□□□ -0.33
LMO7-210ENST00000482116 DDX27Q96GQ7 796 aaKnown RBP12.97□□□□□ -0.33
LMO7-210ENST00000482116 NUDT7P0C024 238 aa12.95□□□□□ -0.34
LMO7-210ENST00000482116 VARS2Q5ST30 1063 aaKnown RBP12.95□□□□□ -0.34
LMO7-210ENST00000482116 CADPS2Q86UW7 1296 aa12.94□□□□□ -0.34
LMO7-210ENST00000482116 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
LMO7-210ENST00000482116 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
LMO7-210ENST00000482116 POTEB3A0JP26 581 aa12.91□□□□□ -0.34
LMO7-210ENST00000482116 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
LMO7-210ENST00000482116 POTEBQ6S5H4 581 aa12.91□□□□□ -0.34
LMO7-210ENST00000482116 UPF1Q92900 1129 aaKnown RBP eCLIP12.91□□□□□ -0.34
LMO7-210ENST00000482116 MFSD10Q14728 455 aa12.89□□□□□ -0.35
LMO7-210ENST00000482116 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
LMO7-210ENST00000482116 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
LMO7-210ENST00000482116 ZNF687Q8N1G0 1237 aa12.83□□□□□ -0.36
LMO7-210ENST00000482116 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
LMO7-210ENST00000482116 MAP3K9P80192 1104 aa12.81□□□□□ -0.36
LMO7-210ENST00000482116 WDR70Q9NW82 654 aa12.79□□□□□ -0.36
LMO7-210ENST00000482116 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
LMO7-210ENST00000482116 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
LMO7-210ENST00000482116 KDM4FA0A1W2PPD8 638 aa12.76□□□□□ -0.37
LMO7-210ENST00000482116 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
LMO7-210ENST00000482116 EVI5O60447 810 aa12.74□□□□□ -0.37
LMO7-210ENST00000482116 EMILIN3Q9NT22 766 aa12.74□□□□□ -0.37
LMO7-210ENST00000482116 PBX2P40425 430 aa12.72□□□□□ -0.37
LMO7-210ENST00000482116 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
LMO7-210ENST00000482116 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
LMO7-210ENST00000482116 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
LMO7-210ENST00000482116 NCAPD3P42695 1498 aa12.7□□□□□ -0.38
LMO7-210ENST00000482116 ZNF454Q8N9F8 522 aa12.69□□□□□ -0.38
LMO7-210ENST00000482116 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
LMO7-210ENST00000482116 E2F4Q16254 413 aa12.67□□□□□ -0.38
LMO7-210ENST00000482116 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
LMO7-210ENST00000482116 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
LMO7-210ENST00000482116 DPYSL4O14531 572 aa12.66□□□□□ -0.38
LMO7-210ENST00000482116 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
LMO7-210ENST00000482116 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
LMO7-210ENST00000482116 PLCB2Q00722 1185 aa12.65□□□□□ -0.38
LMO7-210ENST00000482116 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
LMO7-210ENST00000482116 ARHGAP33O14559 1287 aa12.64□□□□□ -0.39
LMO7-210ENST00000482116 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
LMO7-210ENST00000482116 FOSBP53539 338 aa12.62□□□□□ -0.39
LMO7-210ENST00000482116 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
LMO7-210ENST00000482116 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
LMO7-210ENST00000482116 NESP48681 1621 aa12.59□□□□□ -0.39
LMO7-210ENST00000482116 POTEEQ6S8J3 1075 aa12.59□□□□□ -0.39
LMO7-210ENST00000482116 KCNK17Q96T54 332 aa12.59□□□□□ -0.39
LMO7-210ENST00000482116 ERCC6Q03468 1493 aa12.59□□□□□ -0.39
LMO7-210ENST00000482116 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
LMO7-210ENST00000482116 ZDHHC16Q969W1 377 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms