RNA–Protein interactions for RNA: ENST00000481807.3

MECP2-208, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-208ENST00000481807 PPARGC1BQ86YN6 1023 aaKnown RBP12.26□□□□□ -0.45
MECP2-208ENST00000481807 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
MECP2-208ENST00000481807 KIAA0556O60303 1618 aa12.24□□□□□ -0.45
MECP2-208ENST00000481807 MADDQ8WXG6 1647 aa12.23□□□□□ -0.45
MECP2-208ENST00000481807 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
MECP2-208ENST00000481807 SPATA31D1Q6ZQQ2 1576 aa12.22□□□□□ -0.45
MECP2-208ENST00000481807 LRRC9Q6ZRR7 1453 aa12.21□□□□□ -0.46
MECP2-208ENST00000481807 ABCA8O94911 1581 aa12.19□□□□□ -0.46
MECP2-208ENST00000481807 KANK4Q5T7N3 995 aaPredicted RBP12.19□□□□□ -0.46
MECP2-208ENST00000481807 CCDC18Q5T9S5 1454 aa12.18□□□□□ -0.46
MECP2-208ENST00000481807 NEO1Q92859 1461 aa12.18□□□□□ -0.46
MECP2-208ENST00000481807 HECW1Q76N89 1606 aa12.17□□□□□ -0.46
MECP2-208ENST00000481807 HSPA2P54652 639 aa12.16□□□□□ -0.46
MECP2-208ENST00000481807 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
MECP2-208ENST00000481807 RRBP1Q9P2E9 1410 aaKnown RBP12.16□□□□□ -0.46
MECP2-208ENST00000481807 ABCA9Q8IUA7 1624 aa12.15□□□□□ -0.46
MECP2-208ENST00000481807 FRMPD1Q5SYB0 1578 aa12.15□□□□□ -0.46
MECP2-208ENST00000481807 KCNH8Q96L42 1107 aa12.15□□□□□ -0.46
MECP2-208ENST00000481807 RIMS1Q86UR5 1692 aaKnown RBP12.14□□□□□ -0.47
MECP2-208ENST00000481807 ARHGEF40Q8TER5 1519 aa12.14□□□□□ -0.47
MECP2-208ENST00000481807 RAPGEF3O95398 923 aa12.13□□□□□ -0.47
MECP2-208ENST00000481807 LRRIQ1Q96JM4 1722 aa12.12□□□□□ -0.47
MECP2-208ENST00000481807 YEATS2Q9ULM3 1422 aa12.11□□□□□ -0.47
MECP2-208ENST00000481807 EHBP1L1Q8N3D4 1523 aa12.11□□□□□ -0.47
MECP2-208ENST00000481807 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
MECP2-208ENST00000481807 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
MECP2-208ENST00000481807 IQSEC2Q5JU85 1478 aa12.1□□□□□ -0.47
MECP2-208ENST00000481807 HRCP23327 699 aa12.1□□□□□ -0.47
MECP2-208ENST00000481807 POGZQ7Z3K3 1410 aa12.1□□□□□ -0.47
MECP2-208ENST00000481807 TTC37Q6PGP7 1564 aa12.09□□□□□ -0.47
MECP2-208ENST00000481807 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.47
MECP2-208ENST00000481807 MTUS2Q5JR59 1369 aa12.08□□□□□ -0.48
MECP2-208ENST00000481807 CCNB3Q8WWL7 1395 aa12.08□□□□□ -0.48
MECP2-208ENST00000481807 KCNA4P22459 653 aa12.08□□□□□ -0.48
MECP2-208ENST00000481807 ATP1B4Q9UN42 357 aaPredicted RBP12.08□□□□□ -0.48
MECP2-208ENST00000481807 FANCAO15360 1455 aa12.08□□□□□ -0.48
MECP2-208ENST00000481807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
MECP2-208ENST00000481807 STRCQ7RTU9 1775 aa12.06□□□□□ -0.48
MECP2-208ENST00000481807 ATP10BO94823 1461 aa12.06□□□□□ -0.48
MECP2-208ENST00000481807 ZMYM4Q5VZL5 1548 aa12.06□□□□□ -0.48
MECP2-208ENST00000481807 RICTORQ6R327 1708 aa12.06□□□□□ -0.48
MECP2-208ENST00000481807 PREX1Q8TCU6 1659 aa12.05□□□□□ -0.48
MECP2-208ENST00000481807 SUPT6HQ7KZ85 1726 aaKnown RBP12.05□□□□□ -0.48
MECP2-208ENST00000481807 PTPRTO14522 1441 aa12.04□□□□□ -0.48
MECP2-208ENST00000481807 AKNAQ7Z591 1439 aa12.04□□□□□ -0.48
MECP2-208ENST00000481807 MAGI2Q86UL8 1455 aa12.04□□□□□ -0.48
MECP2-208ENST00000481807 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
MECP2-208ENST00000481807 CDK13Q14004 1512 aaKnown RBP12.04□□□□□ -0.48
MECP2-208ENST00000481807 DENND4BO75064 1496 aaPredicted RBP12.03□□□□□ -0.48
MECP2-208ENST00000481807 NCOA2Q15596 1464 aa12.03□□□□□ -0.48
MECP2-208ENST00000481807 SETD1BQ9UPS6 1966 aaKnown RBP12.03□□□□□ -0.48
MECP2-208ENST00000481807 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.49
MECP2-208ENST00000481807 LTBP4Q8N2S1 1624 aa12.01□□□□□ -0.49
MECP2-208ENST00000481807 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
MECP2-208ENST00000481807 FGD6Q6ZV73 1430 aa12.01□□□□□ -0.49
MECP2-208ENST00000481807 ARHGEF12Q9NZN5 1544 aa12.01□□□□□ -0.49
MECP2-208ENST00000481807 ZEB1P37275 1124 aaPredicted RBP12□□□□□ -0.49
MECP2-208ENST00000481807 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
MECP2-208ENST00000481807 CDK11AQ9UQ88 783 aaPredicted RBP12□□□□□ -0.49
MECP2-208ENST00000481807 MYOM3Q5VTT5 1437 aa12□□□□□ -0.49
MECP2-208ENST00000481807 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
MECP2-208ENST00000481807 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
MECP2-208ENST00000481807 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
MECP2-208ENST00000481807 MIA2Q96PC5 1412 aa11.97□□□□□ -0.49
MECP2-208ENST00000481807 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
MECP2-208ENST00000481807 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
MECP2-208ENST00000481807 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
MECP2-208ENST00000481807 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
MECP2-208ENST00000481807 PTPN23Q9H3S7 1636 aa11.92□□□□□ -0.5
MECP2-208ENST00000481807 ATP10AO60312 1499 aa11.91□□□□□ -0.5
MECP2-208ENST00000481807 C9orf84Q5VXU9 1444 aa11.91□□□□□ -0.5
MECP2-208ENST00000481807 PLEKHD1A6NEE1 506 aa11.9□□□□□ -0.5
MECP2-208ENST00000481807 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.9□□□□□ -0.5
MECP2-208ENST00000481807 FAM50AQ14320 339 aaKnown RBP11.9□□□□□ -0.5
MECP2-208ENST00000481807 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.5
MECP2-208ENST00000481807 KIF14Q15058 1648 aa11.89□□□□□ -0.51
MECP2-208ENST00000481807 NCOA1Q15788 1441 aa11.89□□□□□ -0.51
MECP2-208ENST00000481807 ARID3CA6NKF2 412 aa11.89□□□□□ -0.51
MECP2-208ENST00000481807 ITSN2Q9NZM3 1697 aa11.89□□□□□ -0.51
MECP2-208ENST00000481807 MLECQ14165 292 aa11.88□□□□□ -0.51
MECP2-208ENST00000481807 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
MECP2-208ENST00000481807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.87□□□□□ -0.51
MECP2-208ENST00000481807 CEBPAP49715 358 aaPredicted RBP11.87□□□□□ -0.51
MECP2-208ENST00000481807 SETD5Q9C0A6 1442 aa11.86□□□□□ -0.51
MECP2-208ENST00000481807 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
MECP2-208ENST00000481807 MED1Q15648 1581 aaPredicted RBP11.85□□□□□ -0.51
MECP2-208ENST00000481807 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
MECP2-208ENST00000481807 HFM1A2PYH4 1435 aa11.85□□□□□ -0.51
MECP2-208ENST00000481807 TRAPPC8Q9Y2L5 1435 aa11.85□□□□□ -0.51
MECP2-208ENST00000481807 PTPRKQ15262 1439 aa11.84□□□□□ -0.51
MECP2-208ENST00000481807 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
MECP2-208ENST00000481807 ITGAEP38570 1179 aa11.83□□□□□ -0.52
MECP2-208ENST00000481807 SCAPERQ9BY12 1400 aa11.83□□□□□ -0.52
MECP2-208ENST00000481807 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
MECP2-208ENST00000481807 C3P01024 1663 aa11.82□□□□□ -0.52
MECP2-208ENST00000481807 UBAP1LF5GYI3 381 aa11.82□□□□□ -0.52
MECP2-208ENST00000481807 PLCH2O75038 1416 aa11.82□□□□□ -0.52
MECP2-208ENST00000481807 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
MECP2-208ENST00000481807 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
MECP2-208ENST00000481807 AGLP35573 1532 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms