RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ASXL2Q76L83 1435 aa23.16■■□□□ 1.3
RXRA-202ENST00000481739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.15■■□□□ 1.33e-6■■■■■ 32.7
RXRA-202ENST00000481739 TTC37Q6PGP7 1564 aa23.15■■□□□ 1.3
RXRA-202ENST00000481739 HFM1A2PYH4 1435 aa23.13■■□□□ 1.29
RXRA-202ENST00000481739 ZNF644Q9H582 1327 aaPredicted RBP23.13■■□□□ 1.29
RXRA-202ENST00000481739 AKNAQ7Z591 1439 aa23.1■■□□□ 1.29
RXRA-202ENST00000481739 CAMSAP2Q08AD1 1489 aa23.09■■□□□ 1.29
RXRA-202ENST00000481739 MYO5CQ9NQX4 1742 aa23.09■■□□□ 1.29
RXRA-202ENST00000481739 PREX2Q70Z35 1606 aa23.09■■□□□ 1.29
RXRA-202ENST00000481739 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.29
RXRA-202ENST00000481739 ARHGAP5Q13017 1502 aa23.06■■□□□ 1.28
RXRA-202ENST00000481739 MAPKBP1O60336 1514 aa23.04■■□□□ 1.28
RXRA-202ENST00000481739 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
RXRA-202ENST00000481739 ZNF316A6NFI3 1004 aaPredicted RBP23.03■■□□□ 1.28
RXRA-202ENST00000481739 CHIC2Q9UKJ5 165 aa23.03■■□□□ 1.28
RXRA-202ENST00000481739 ACIN1Q9UKV3 1341 aaKnown RBP23.03■■□□□ 1.28
RXRA-202ENST00000481739 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
RXRA-202ENST00000481739 PLCH2O75038 1416 aa23.01■■□□□ 1.27
RXRA-202ENST00000481739 DAPK1P53355 1430 aa23.01■■□□□ 1.27
RXRA-202ENST00000481739 NAIPQ13075 1403 aa23.01■■□□□ 1.27
RXRA-202ENST00000481739 ABCA9Q8IUA7 1624 aa23.01■■□□□ 1.27
RXRA-202ENST00000481739 ABCC5O15440 1437 aa22.98■■□□□ 1.27
RXRA-202ENST00000481739 SAMD9LQ8IVG5 1584 aa22.98■■□□□ 1.27
RXRA-202ENST00000481739 EFCAB2Q5VUJ9 269 aa22.98■■□□□ 1.27
RXRA-202ENST00000481739 HNRNPMP52272 730 aaKnown RBP eCLIP22.96■■□□□ 1.273e-6■■■■□ 24.7
RXRA-202ENST00000481739 GCC2Q8IWJ2 1684 aa22.96■■□□□ 1.27
RXRA-202ENST00000481739 TIMELESSQ9UNS1 1208 aa22.96■■□□□ 1.27
RXRA-202ENST00000481739 ROCK1Q13464 1354 aa22.95■■□□□ 1.26
RXRA-202ENST00000481739 RRP7BPQ9NSQ0 103 aa22.94■■□□□ 1.26
RXRA-202ENST00000481739 ARAP3Q8WWN8 1544 aa22.91■■□□□ 1.26
RXRA-202ENST00000481739 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
RXRA-202ENST00000481739 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
RXRA-202ENST00000481739 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
RXRA-202ENST00000481739 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
RXRA-202ENST00000481739 CD109Q6YHK3 1445 aa22.9■■□□□ 1.26
RXRA-202ENST00000481739 TSPY4P0CV99 314 aa22.89■■□□□ 1.26
RXRA-202ENST00000481739 TSPY10P0CW01 314 aa22.89■■□□□ 1.26
RXRA-202ENST00000481739 ARHGEF5Q12774 1597 aa22.89■■□□□ 1.25
RXRA-202ENST00000481739 FANCAO15360 1455 aa22.88■■□□□ 1.25
RXRA-202ENST00000481739 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
RXRA-202ENST00000481739 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
RXRA-202ENST00000481739 CCDC141Q6ZP82 1450 aa22.87■■□□□ 1.25
RXRA-202ENST00000481739 ADGBQ8N7X0 1667 aa22.86■■□□□ 1.25
RXRA-202ENST00000481739 KIAA1107Q9UPP5 1409 aa22.86■■□□□ 1.25
RXRA-202ENST00000481739 C9orf84Q5VXU9 1444 aa22.84■■□□□ 1.25
RXRA-202ENST00000481739 ABCC1P33527 1531 aa22.84■■□□□ 1.25
RXRA-202ENST00000481739 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.25
RXRA-202ENST00000481739 FAM69CQ0P6D2 419 aa22.83■■□□□ 1.25
RXRA-202ENST00000481739 ANKRD30AQ9BXX3 1397 aa22.82■■□□□ 1.24
RXRA-202ENST00000481739 ARHGEF12Q9NZN5 1544 aa22.82■■□□□ 1.24
RXRA-202ENST00000481739 GLI2P10070 1586 aa22.8■■□□□ 1.24
RXRA-202ENST00000481739 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
RXRA-202ENST00000481739 ADGRL2O95490 1459 aa22.8■■□□□ 1.24
RXRA-202ENST00000481739 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
RXRA-202ENST00000481739 ADGRL1O94910 1474 aa22.79■■□□□ 1.24
RXRA-202ENST00000481739 MAP3K4Q9Y6R4 1608 aa22.78■■□□□ 1.24
RXRA-202ENST00000481739 CFAP74Q9C0B2 1584 aa22.78■■□□□ 1.24
RXRA-202ENST00000481739 DNAJC5Q9H3Z4 198 aa22.77■■□□□ 1.24
RXRA-202ENST00000481739 TRAPPC8Q9Y2L5 1435 aa22.77■■□□□ 1.23
RXRA-202ENST00000481739 SCAPERQ9BY12 1400 aa22.76■■□□□ 1.23
RXRA-202ENST00000481739 KDM6BO15054 1643 aa22.75■■□□□ 1.23
RXRA-202ENST00000481739 AFAP1Q8N556 730 aa22.73■■□□□ 1.23
RXRA-202ENST00000481739 MAST1Q9Y2H9 1570 aa22.73■■□□□ 1.23
RXRA-202ENST00000481739 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
RXRA-202ENST00000481739 TSPOAP1O95153 1857 aa22.71■■□□□ 1.23
RXRA-202ENST00000481739 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
RXRA-202ENST00000481739 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
RXRA-202ENST00000481739 NEO1Q92859 1461 aa22.7■■□□□ 1.22
RXRA-202ENST00000481739 SIN3AQ96ST3 1273 aa22.7■■□□□ 1.22
RXRA-202ENST00000481739 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.22
RXRA-202ENST00000481739 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
RXRA-202ENST00000481739 NEUROD1Q13562 356 aa22.68■■□□□ 1.22
RXRA-202ENST00000481739 KIF13AQ9H1H9 1805 aa22.68■■□□□ 1.22
RXRA-202ENST00000481739 TONSLQ96HA7 1378 aa22.67■■□□□ 1.22
RXRA-202ENST00000481739 PLXNC1O60486 1568 aa22.65■■□□□ 1.22
RXRA-202ENST00000481739 ZNF518AQ6AHZ1 1483 aa22.63■■□□□ 1.21
RXRA-202ENST00000481739 RTEL1-TNFRSF6BF6WH68 1400 aa22.63■■□□□ 1.21
RXRA-202ENST00000481739 PPP1R15AO75807 674 aaPredicted RBP22.62■■□□□ 1.21
RXRA-202ENST00000481739 MPHOSPH9Q99550 1183 aa22.62■■□□□ 1.21
RXRA-202ENST00000481739 ZFYVE16Q7Z3T8 1539 aa22.62■■□□□ 1.21
RXRA-202ENST00000481739 POGZQ7Z3K3 1410 aa22.62■■□□□ 1.21
RXRA-202ENST00000481739 DENND4BO75064 1496 aaPredicted RBP22.61■■□□□ 1.21
RXRA-202ENST00000481739 TEX14Q8IWB6 1497 aa22.61■■□□□ 1.21
RXRA-202ENST00000481739 ATP7AQ04656 1500 aa22.6■■□□□ 1.21
RXRA-202ENST00000481739 PPRC1Q5VV67 1664 aaKnown RBP22.6■■□□□ 1.21
RXRA-202ENST00000481739 INO80Q9ULG1 1556 aaPredicted RBP22.59■■□□□ 1.21
RXRA-202ENST00000481739 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
RXRA-202ENST00000481739 RAPGEF3O95398 923 aa22.58■■□□□ 1.21
RXRA-202ENST00000481739 KDM5CP41229 1560 aa22.54■■□□□ 1.2
RXRA-202ENST00000481739 KIDINS220Q9ULH0 1771 aa22.53■■□□□ 1.2
RXRA-202ENST00000481739 TRHP20396 242 aaPredicted RBP22.53■■□□□ 1.2
RXRA-202ENST00000481739 SLC4A1APQ9BWU0 796 aaKnown RBP22.53■■□□□ 1.2
RXRA-202ENST00000481739 ERBINQ96RT1 1412 aa22.52■■□□□ 1.2
RXRA-202ENST00000481739 RICTORQ6R327 1708 aa22.52■■□□□ 1.2
RXRA-202ENST00000481739 NUP155O75694 1391 aa22.52■■□□□ 1.2
RXRA-202ENST00000481739 HECW2Q9P2P5 1572 aa22.51■■□□□ 1.19
RXRA-202ENST00000481739 ANKRD30BQ9BXX2 1392 aa22.51■■□□□ 1.19
RXRA-202ENST00000481739 PZPP20742 1482 aa22.5■■□□□ 1.19
RXRA-202ENST00000481739 MLH3Q9UHC1 1453 aa22.5■■□□□ 1.19
RXRA-202ENST00000481739 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms