RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 FANCAO15360 1455 aa19.3■□□□□ 0.68
TRA2B-212ENST00000480461 KANK4Q5T7N3 995 aaPredicted RBP19.3■□□□□ 0.68
TRA2B-212ENST00000480461 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
TRA2B-212ENST00000480461 ZMYM4Q5VZL5 1548 aa19.3■□□□□ 0.68
TRA2B-212ENST00000480461 CCDC18Q5T9S5 1454 aa19.29■□□□□ 0.68
TRA2B-212ENST00000480461 CFAP74Q9C0B2 1584 aa19.29■□□□□ 0.68
TRA2B-212ENST00000480461 CERKQ8TCT0 537 aa19.28■□□□□ 0.68
TRA2B-212ENST00000480461 AKNAQ7Z591 1439 aa19.27■□□□□ 0.68
TRA2B-212ENST00000480461 POGZQ7Z3K3 1410 aa19.26■□□□□ 0.67
TRA2B-212ENST00000480461 ZFYVE16Q7Z3T8 1539 aa19.26■□□□□ 0.67
TRA2B-212ENST00000480461 TTC37Q6PGP7 1564 aa19.26■□□□□ 0.67
TRA2B-212ENST00000480461 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
TRA2B-212ENST00000480461 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
TRA2B-212ENST00000480461 FER1L4A9Z1Z3 1794 aa19.24■□□□□ 0.67
TRA2B-212ENST00000480461 PLPPR3Q6T4P5 718 aa19.24■□□□□ 0.67
TRA2B-212ENST00000480461 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.24■□□□□ 0.672e-9■■■□□ 17.4
TRA2B-212ENST00000480461 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
TRA2B-212ENST00000480461 MAGI2Q86UL8 1455 aa19.21■□□□□ 0.67
TRA2B-212ENST00000480461 MAP3K1Q13233 1512 aa19.2■□□□□ 0.66
TRA2B-212ENST00000480461 MTUS2Q5JR59 1369 aa19.19■□□□□ 0.66
TRA2B-212ENST00000480461 PREX1Q8TCU6 1659 aa19.18■□□□□ 0.66
TRA2B-212ENST00000480461 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
TRA2B-212ENST00000480461 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
TRA2B-212ENST00000480461 KIF14Q15058 1648 aa19.18■□□□□ 0.66
TRA2B-212ENST00000480461 DISP3Q9P2K9 1392 aa19.18■□□□□ 0.66
TRA2B-212ENST00000480461 LRRC9Q6ZRR7 1453 aa19.17■□□□□ 0.66
TRA2B-212ENST00000480461 APLP2Q06481 763 aa19.17■□□□□ 0.66
TRA2B-212ENST00000480461 MLECQ14165 292 aa19.15■□□□□ 0.66
TRA2B-212ENST00000480461 PPARGC1BQ86YN6 1023 aaKnown RBP19.15■□□□□ 0.66
TRA2B-212ENST00000480461 SOCS7O14512 581 aa19.14■□□□□ 0.65
TRA2B-212ENST00000480461 STRCQ7RTU9 1775 aa19.12■□□□□ 0.65
TRA2B-212ENST00000480461 PLCH2O75038 1416 aa19.1■□□□□ 0.65
TRA2B-212ENST00000480461 C9orf84Q5VXU9 1444 aa19.1■□□□□ 0.65
TRA2B-212ENST00000480461 SPATA31D1Q6ZQQ2 1576 aa19.1■□□□□ 0.65
TRA2B-212ENST00000480461 EHBP1L1Q8N3D4 1523 aa19.1■□□□□ 0.65
TRA2B-212ENST00000480461 SCAPERQ9BY12 1400 aa19.09■□□□□ 0.65
TRA2B-212ENST00000480461 ATP10AO60312 1499 aa19.09■□□□□ 0.65
TRA2B-212ENST00000480461 GPATCH8Q9UKJ3 1502 aaKnown RBP19.08■□□□□ 0.64
TRA2B-212ENST00000480461 NCOA2Q15596 1464 aa19.08■□□□□ 0.64
TRA2B-212ENST00000480461 CCNB3Q8WWL7 1395 aa19.05■□□□□ 0.64
TRA2B-212ENST00000480461 CEBPAP49715 358 aaPredicted RBP19.04■□□□□ 0.64
TRA2B-212ENST00000480461 EFCAB2Q5VUJ9 269 aa19.04■□□□□ 0.64
TRA2B-212ENST00000480461 UHRF1BP1Q6BDS2 1440 aa19.04■□□□□ 0.64
TRA2B-212ENST00000480461 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
TRA2B-212ENST00000480461 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
TRA2B-212ENST00000480461 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
TRA2B-212ENST00000480461 CFDP1Q9UEE9 299 aaPredicted RBP19.01■□□□□ 0.63
TRA2B-212ENST00000480461 KDM5CP41229 1560 aa19■□□□□ 0.63
TRA2B-212ENST00000480461 SUPT6HQ7KZ85 1726 aaKnown RBP19■□□□□ 0.63
TRA2B-212ENST00000480461 ZNF518AQ6AHZ1 1483 aa18.99■□□□□ 0.63
TRA2B-212ENST00000480461 ZNF777Q9ULD5 760 aaPredicted RBP18.99■□□□□ 0.63
TRA2B-212ENST00000480461 CDC42BPBQ9Y5S2 1711 aa18.99■□□□□ 0.63
TRA2B-212ENST00000480461 PTPRTO14522 1441 aa18.99■□□□□ 0.63
TRA2B-212ENST00000480461 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
TRA2B-212ENST00000480461 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
TRA2B-212ENST00000480461 LTBP4Q8N2S1 1624 aa18.97■□□□□ 0.63
TRA2B-212ENST00000480461 ARHGAP5Q13017 1502 aa18.97■□□□□ 0.63
TRA2B-212ENST00000480461 REREQ9P2R6 1566 aa18.97■□□□□ 0.63
TRA2B-212ENST00000480461 C3P01024 1663 aa18.96■□□□□ 0.63
TRA2B-212ENST00000480461 PREX2Q70Z35 1606 aa18.95■□□□□ 0.62
TRA2B-212ENST00000480461 SETD1BQ9UPS6 1966 aaKnown RBP18.94■□□□□ 0.62
TRA2B-212ENST00000480461 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.621e-7■■■□□ 17.4
TRA2B-212ENST00000480461 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
TRA2B-212ENST00000480461 MYOM3Q5VTT5 1437 aa18.93■□□□□ 0.62
TRA2B-212ENST00000480461 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
TRA2B-212ENST00000480461 AFAP1Q8N556 730 aa18.92■□□□□ 0.62
TRA2B-212ENST00000480461 NCOA1Q15788 1441 aa18.9■□□□□ 0.62
TRA2B-212ENST00000480461 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.62
TRA2B-212ENST00000480461 TRAPPC8Q9Y2L5 1435 aa18.89■□□□□ 0.61
TRA2B-212ENST00000480461 MIA2Q96PC5 1412 aa18.88■□□□□ 0.61
TRA2B-212ENST00000480461 AGLP35573 1532 aa18.88■□□□□ 0.61
TRA2B-212ENST00000480461 FGD6Q6ZV73 1430 aa18.87■□□□□ 0.61
TRA2B-212ENST00000480461 MLH3Q9UHC1 1453 aa18.87■□□□□ 0.61
TRA2B-212ENST00000480461 MBD5Q9P267 1494 aa18.86■□□□□ 0.61
TRA2B-212ENST00000480461 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
TRA2B-212ENST00000480461 ABCC1P33527 1531 aa18.84■□□□□ 0.61
TRA2B-212ENST00000480461 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
TRA2B-212ENST00000480461 CAMSAP2Q08AD1 1489 aa18.84■□□□□ 0.61
TRA2B-212ENST00000480461 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
TRA2B-212ENST00000480461 SYCP2Q9BX26 1530 aa18.82■□□□□ 0.6
TRA2B-212ENST00000480461 CAMSAP1Q5T5Y3 1602 aa18.82■□□□□ 0.6
TRA2B-212ENST00000480461 CNTLNQ9NXG0 1405 aa18.81■□□□□ 0.6
TRA2B-212ENST00000480461 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
TRA2B-212ENST00000480461 PLEKHH2Q8IVE3 1493 aa18.8■□□□□ 0.6
TRA2B-212ENST00000480461 FAM50AQ14320 339 aaKnown RBP18.8■□□□□ 0.6
TRA2B-212ENST00000480461 KIDINS220Q9ULH0 1771 aa18.79■□□□□ 0.6
TRA2B-212ENST00000480461 ESF1Q9H501 851 aaKnown RBP18.79■□□□□ 0.6
TRA2B-212ENST00000480461 MROH2AA6NES4 1674 aa18.79■□□□□ 0.6
TRA2B-212ENST00000480461 PTPN23Q9H3S7 1636 aa18.78■□□□□ 0.6
TRA2B-212ENST00000480461 NPATQ14207 1427 aa18.77■□□□□ 0.6
TRA2B-212ENST00000480461 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
TRA2B-212ENST00000480461 ABCC5O15440 1437 aa18.75■□□□□ 0.59
TRA2B-212ENST00000480461 SPAG9O60271 1321 aaKnown RBP18.74■□□□□ 0.59
TRA2B-212ENST00000480461 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
TRA2B-212ENST00000480461 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
TRA2B-212ENST00000480461 ZNF142P52746 1687 aaPredicted RBP18.74■□□□□ 0.59
TRA2B-212ENST00000480461 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
TRA2B-212ENST00000480461 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
TRA2B-212ENST00000480461 ARHGEF5Q12774 1597 aa18.72■□□□□ 0.59
TRA2B-212ENST00000480461 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms