RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
PKNOX1-206ENST00000480179 KDM5BQ9UGL1 1544 aa21.5■■□□□ 1.03
PKNOX1-206ENST00000480179 ATP10BO94823 1461 aa21.49■■□□□ 1.03
PKNOX1-206ENST00000480179 KDM4FA0A1W2PPD8 638 aa21.47■■□□□ 1.03
PKNOX1-206ENST00000480179 ITSN2Q9NZM3 1697 aa21.47■■□□□ 1.03
PKNOX1-206ENST00000480179 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
PKNOX1-206ENST00000480179 ZCCHC11Q5TAX3 1644 aaKnown RBP21.42■■□□□ 1.02
PKNOX1-206ENST00000480179 TEX14Q8IWB6 1497 aa21.42■■□□□ 1.02
PKNOX1-206ENST00000480179 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
PKNOX1-206ENST00000480179 GCC2Q8IWJ2 1684 aa21.4■■□□□ 1.02
PKNOX1-206ENST00000480179 NAIPQ13075 1403 aa21.39■■□□□ 1.02
PKNOX1-206ENST00000480179 PPRC1Q5VV67 1664 aaKnown RBP21.39■■□□□ 1.01
PKNOX1-206ENST00000480179 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
PKNOX1-206ENST00000480179 GPATCH8Q9UKJ3 1502 aaKnown RBP21.39■■□□□ 1.01
PKNOX1-206ENST00000480179 WDR7Q9Y4E6 1490 aa21.38■■□□□ 1.01
PKNOX1-206ENST00000480179 CHIC2Q9UKJ5 165 aa21.38■■□□□ 1.01
PKNOX1-206ENST00000480179 CDC42BPAQ5VT25 1732 aa21.37■■□□□ 1.01
PKNOX1-206ENST00000480179 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
PKNOX1-206ENST00000480179 ZNF644Q9H582 1327 aaPredicted RBP21.37■■□□□ 1.01
PKNOX1-206ENST00000480179 MAP3K4Q9Y6R4 1608 aa21.36■■□□□ 1.01
PKNOX1-206ENST00000480179 DAPK1P53355 1430 aa21.36■■□□□ 1.01
PKNOX1-206ENST00000480179 KCNH8Q96L42 1107 aa21.35■■□□□ 1.01
PKNOX1-206ENST00000480179 RRP7BPQ9NSQ0 103 aa21.34■■□□□ 1.01
PKNOX1-206ENST00000480179 CFDP1Q9UEE9 299 aaPredicted RBP21.34■■□□□ 1.01
PKNOX1-206ENST00000480179 AKNAQ7Z591 1439 aa21.33■■□□□ 1.01
PKNOX1-206ENST00000480179 ABCC5O15440 1437 aa21.32■■□□□ 1
PKNOX1-206ENST00000480179 COL17A1Q9UMD9 1497 aaPredicted RBP21.32■■□□□ 1
PKNOX1-206ENST00000480179 CD109Q6YHK3 1445 aa21.29■■□□□ 1
PKNOX1-206ENST00000480179 ZNF777Q9ULD5 760 aaPredicted RBP21.29■■□□□ 1
PKNOX1-206ENST00000480179 CROCC2H7BZ55 1655 aa21.28■■□□□ 1
PKNOX1-206ENST00000480179 ADGRL1O94910 1474 aa21.26■□□□□ 0.99
PKNOX1-206ENST00000480179 ADGBQ8N7X0 1667 aa21.26■□□□□ 0.99
PKNOX1-206ENST00000480179 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
PKNOX1-206ENST00000480179 PREX2Q70Z35 1606 aa21.24■□□□□ 0.99
PKNOX1-206ENST00000480179 TTC37Q6PGP7 1564 aa21.24■□□□□ 0.99
PKNOX1-206ENST00000480179 ZNF316A6NFI3 1004 aaPredicted RBP21.23■□□□□ 0.99
PKNOX1-206ENST00000480179 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
PKNOX1-206ENST00000480179 SIN3AQ96ST3 1273 aa21.2■□□□□ 0.98
PKNOX1-206ENST00000480179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.19■□□□□ 0.983e-7■■■■□ 21.7
PKNOX1-206ENST00000480179 NEUROD1Q13562 356 aa21.18■□□□□ 0.98
PKNOX1-206ENST00000480179 MYO5CQ9NQX4 1742 aa21.17■□□□□ 0.98
PKNOX1-206ENST00000480179 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
PKNOX1-206ENST00000480179 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
PKNOX1-206ENST00000480179 ADGRL2O95490 1459 aa21.15■□□□□ 0.98
PKNOX1-206ENST00000480179 ARHGAP5Q13017 1502 aa21.14■□□□□ 0.97
PKNOX1-206ENST00000480179 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.97
PKNOX1-206ENST00000480179 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
PKNOX1-206ENST00000480179 NCOA1Q15788 1441 aa21.12■□□□□ 0.97
PKNOX1-206ENST00000480179 C9orf84Q5VXU9 1444 aa21.11■□□□□ 0.97
PKNOX1-206ENST00000480179 DIEXFQ68CQ4 756 aaKnown RBP21.1■□□□□ 0.97
PKNOX1-206ENST00000480179 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
PKNOX1-206ENST00000480179 DENND4BO75064 1496 aaPredicted RBP21.09■□□□□ 0.97
PKNOX1-206ENST00000480179 HNRNPMP52272 730 aaKnown RBP eCLIP21.08■□□□□ 0.972e-7■□□□□ 11.3
PKNOX1-206ENST00000480179 SYCP2Q9BX26 1530 aa21.08■□□□□ 0.96
PKNOX1-206ENST00000480179 ARAP3Q8WWN8 1544 aa21.07■□□□□ 0.96
PKNOX1-206ENST00000480179 MBD5Q9P267 1494 aa21.07■□□□□ 0.96
PKNOX1-206ENST00000480179 CCDC141Q6ZP82 1450 aa21.06■□□□□ 0.96
PKNOX1-206ENST00000480179 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
PKNOX1-206ENST00000480179 ABCA9Q8IUA7 1624 aa21.03■□□□□ 0.96
PKNOX1-206ENST00000480179 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
PKNOX1-206ENST00000480179 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.96
PKNOX1-206ENST00000480179 TSPY4P0CV99 314 aa21.02■□□□□ 0.96
PKNOX1-206ENST00000480179 TSPY10P0CW01 314 aa21.02■□□□□ 0.96
PKNOX1-206ENST00000480179 TIMELESSQ9UNS1 1208 aa21.02■□□□□ 0.96
PKNOX1-206ENST00000480179 PLCH2O75038 1416 aa21■□□□□ 0.95
PKNOX1-206ENST00000480179 PLEKHH2Q8IVE3 1493 aa21■□□□□ 0.95
PKNOX1-206ENST00000480179 RAPGEF3O95398 923 aa21■□□□□ 0.95
PKNOX1-206ENST00000480179 ANKRD50Q9ULJ7 1429 aa21■□□□□ 0.95
PKNOX1-206ENST00000480179 NEO1Q92859 1461 aa20.99■□□□□ 0.95
PKNOX1-206ENST00000480179 PZPP20742 1482 aa20.98■□□□□ 0.95
PKNOX1-206ENST00000480179 KIF15Q9NS87 1388 aa20.98■□□□□ 0.95
PKNOX1-206ENST00000480179 HECW2Q9P2P5 1572 aa20.97■□□□□ 0.95
PKNOX1-206ENST00000480179 MAST1Q9Y2H9 1570 aa20.97■□□□□ 0.95
PKNOX1-206ENST00000480179 FOXD1Q16676 465 aa20.97■□□□□ 0.95
PKNOX1-206ENST00000480179 KIAA1107Q9UPP5 1409 aa20.96■□□□□ 0.95
PKNOX1-206ENST00000480179 ABCC1P33527 1531 aa20.96■□□□□ 0.95
PKNOX1-206ENST00000480179 ARHGEF12Q9NZN5 1544 aa20.95■□□□□ 0.94
PKNOX1-206ENST00000480179 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
PKNOX1-206ENST00000480179 RSPH4AQ5TD94 716 aa20.94■□□□□ 0.94
PKNOX1-206ENST00000480179 PPP1R15AO75807 674 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-206ENST00000480179 EFCAB2Q5VUJ9 269 aa20.93■□□□□ 0.94
PKNOX1-206ENST00000480179 ILDR1Q86SU0 546 aaPredicted RBP20.93■□□□□ 0.94
PKNOX1-206ENST00000480179 ARID4BQ4LE39 1312 aaPredicted RBP20.92■□□□□ 0.94
PKNOX1-206ENST00000480179 PLXNC1O60486 1568 aa20.91■□□□□ 0.94
PKNOX1-206ENST00000480179 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
PKNOX1-206ENST00000480179 KDM5DQ9BY66 1539 aa20.87■□□□□ 0.93
PKNOX1-206ENST00000480179 NUP155O75694 1391 aa20.86■□□□□ 0.93
PKNOX1-206ENST00000480179 TRAPPC8Q9Y2L5 1435 aa20.86■□□□□ 0.93
PKNOX1-206ENST00000480179 FANCAO15360 1455 aa20.85■□□□□ 0.93
PKNOX1-206ENST00000480179 RPRD2Q5VT52 1461 aaKnown RBP20.84■□□□□ 0.93
PKNOX1-206ENST00000480179 PTPRMP28827 1452 aa20.83■□□□□ 0.92
PKNOX1-206ENST00000480179 PKD2Q13563 968 aa20.82■□□□□ 0.92
PKNOX1-206ENST00000480179 UNC13BO14795 1591 aa20.82■□□□□ 0.92
PKNOX1-206ENST00000480179 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
PKNOX1-206ENST00000480179 CFAP74Q9C0B2 1584 aa20.81■□□□□ 0.92
PKNOX1-206ENST00000480179 DUOX2Q9NRD8 1548 aa20.81■□□□□ 0.92
PKNOX1-206ENST00000480179 ADAMTSL3P82987 1691 aa20.81■□□□□ 0.92
PKNOX1-206ENST00000480179 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
PKNOX1-206ENST00000480179 FAM135AQ9P2D6 1515 aa20.78■□□□□ 0.92
PKNOX1-206ENST00000480179 L3MBTL2Q969R5 705 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms