RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 FGD1P98174 961 aa25.03■■□□□ 1.6
ABCA2-217ENST00000479446 SRPK2P78362 688 aaKnown RBP25.03■■□□□ 1.6
ABCA2-217ENST00000479446 FOXD1Q16676 465 aa25.03■■□□□ 1.6
ABCA2-217ENST00000479446 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
ABCA2-217ENST00000479446 MPHOSPH9Q99550 1183 aa25.02■■□□□ 1.6
ABCA2-217ENST00000479446 CFAP44Q96MT7 982 aa25.02■■□□□ 1.6
ABCA2-217ENST00000479446 LMOD2Q6P5Q4 547 aa25.01■■□□□ 1.59
ABCA2-217ENST00000479446 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
ABCA2-217ENST00000479446 TCERG1O14776 1098 aaKnown RBP24.99■■□□□ 1.59
ABCA2-217ENST00000479446 GOLGA6L6A8MZA4 724 aa24.98■■□□□ 1.59
ABCA2-217ENST00000479446 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
ABCA2-217ENST00000479446 MCCP23508 829 aa24.97■■□□□ 1.59
ABCA2-217ENST00000479446 IPO8O15397 1037 aaKnown RBP24.97■■□□□ 1.59
ABCA2-217ENST00000479446 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
ABCA2-217ENST00000479446 GOLGA6L4A6NEF3 574 aa24.95■■□□□ 1.58
ABCA2-217ENST00000479446 NRDCO43847 1150 aa24.95■■□□□ 1.58
ABCA2-217ENST00000479446 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
ABCA2-217ENST00000479446 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
ABCA2-217ENST00000479446 SPRYD3Q8NCJ5 442 aa24.92■■□□□ 1.58
ABCA2-217ENST00000479446 NUP155O75694 1391 aa24.92■■□□□ 1.58
ABCA2-217ENST00000479446 SAFB2Q14151 953 aaKnown RBP eCLIP24.91■■□□□ 1.58
ABCA2-217ENST00000479446 RWDD1Q9H446 243 aaPredicted RBP24.9■■□□□ 1.58
ABCA2-217ENST00000479446 TSHZ2Q9NRE2 1034 aa24.9■■□□□ 1.58
ABCA2-217ENST00000479446 MSNP26038 577 aaKnown RBP24.89■■□□□ 1.57
ABCA2-217ENST00000479446 ANKRD30AQ9BXX3 1397 aa24.88■■□□□ 1.57
ABCA2-217ENST00000479446 NAP1L2Q9ULW6 460 aaPredicted RBP24.88■■□□□ 1.57
ABCA2-217ENST00000479446 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
ABCA2-217ENST00000479446 U2AF1L5P0DN76 240 aaPredicted RBP24.87■■□□□ 1.57
ABCA2-217ENST00000479446 U2AF1Q01081 240 aaKnown RBP eCLIP24.87■■□□□ 1.57
ABCA2-217ENST00000479446 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
ABCA2-217ENST00000479446 CHAF1AQ13111 956 aaPredicted RBP24.85■■□□□ 1.57
ABCA2-217ENST00000479446 RTF1Q92541 710 aaKnown RBP24.85■■□□□ 1.57
ABCA2-217ENST00000479446 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
ABCA2-217ENST00000479446 TAOK2Q9UL54 1235 aa24.85■■□□□ 1.57
ABCA2-217ENST00000479446 CALD1Q05682 793 aaKnown RBP24.85■■□□□ 1.57
ABCA2-217ENST00000479446 SOX12O15370 315 aa24.85■■□□□ 1.57
ABCA2-217ENST00000479446 GBP4Q96PP9 640 aa24.84■■□□□ 1.57
ABCA2-217ENST00000479446 GGT6Q6P531 493 aa24.83■■□□□ 1.57
ABCA2-217ENST00000479446 PTMSP20962 102 aa24.82■■□□□ 1.56
ABCA2-217ENST00000479446 PDE3BQ13370 1112 aa24.81■■□□□ 1.56
ABCA2-217ENST00000479446 STK26Q9P289 416 aa24.81■■□□□ 1.56
ABCA2-217ENST00000479446 NLRP13Q86W25 1043 aa24.81■■□□□ 1.56
ABCA2-217ENST00000479446 ITPRIPQ8IWB1 547 aa24.81■■□□□ 1.56
ABCA2-217ENST00000479446 PMFBP1Q8TBY8 1022 aa24.8■■□□□ 1.56
ABCA2-217ENST00000479446 IPO9Q96P70 1041 aaKnown RBP24.79■■□□□ 1.56
ABCA2-217ENST00000479446 GOLGA2Q08379 1002 aa24.78■■□□□ 1.56
ABCA2-217ENST00000479446 SLKQ9H2G2 1235 aaPredicted RBP24.78■■□□□ 1.56
ABCA2-217ENST00000479446 SMARCA2P51531 1590 aa24.78■■□□□ 1.56
ABCA2-217ENST00000479446 APBB1O00213 710 aa24.77■■□□□ 1.56
ABCA2-217ENST00000479446 EFCAB2Q5VUJ9 269 aa24.77■■□□□ 1.56
ABCA2-217ENST00000479446 EIF3AQ14152 1382 aaKnown RBP24.77■■□□□ 1.56
ABCA2-217ENST00000479446 KIAA1211Q6ZU35 1233 aa24.75■■□□□ 1.55
ABCA2-217ENST00000479446 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
ABCA2-217ENST00000479446 MLECQ14165 292 aa24.75■■□□□ 1.55
ABCA2-217ENST00000479446 NPHP1O15259 732 aa24.73■■□□□ 1.55
ABCA2-217ENST00000479446 DRC7Q8IY82 874 aa24.71■■□□□ 1.55
ABCA2-217ENST00000479446 GZF1Q9H116 711 aaPredicted RBP24.69■■□□□ 1.54
ABCA2-217ENST00000479446 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
ABCA2-217ENST00000479446 SMC4Q9NTJ3 1288 aa24.69■■□□□ 1.54
ABCA2-217ENST00000479446 RAPGEF2Q9Y4G8 1499 aa24.69■■□□□ 1.54
ABCA2-217ENST00000479446 DHX57Q6P158 1386 aaKnown RBP24.69■■□□□ 1.54
ABCA2-217ENST00000479446 PHLDB1Q86UU1 1377 aa24.69■■□□□ 1.54
ABCA2-217ENST00000479446 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
ABCA2-217ENST00000479446 TULP1O00294 542 aaPredicted RBP24.68■■□□□ 1.54
ABCA2-217ENST00000479446 FHOD3Q2V2M9 1422 aa24.67■■□□□ 1.54
ABCA2-217ENST00000479446 MFAP1P55081 439 aaKnown RBP24.66■■□□□ 1.54
ABCA2-217ENST00000479446 CENPJQ9HC77 1338 aaPredicted RBP24.66■■□□□ 1.54
ABCA2-217ENST00000479446 RSPH4AQ5TD94 716 aa24.66■■□□□ 1.54
ABCA2-217ENST00000479446 CHMP4AQ9BY43 222 aa24.64■■□□□ 1.54
ABCA2-217ENST00000479446 KIF15Q9NS87 1388 aa24.64■■□□□ 1.54
ABCA2-217ENST00000479446 TERF2IPQ9NYB0 399 aa24.63■■□□□ 1.53
ABCA2-217ENST00000479446 KIAA2012Q0VF49 1180 aa24.63■■□□□ 1.53
ABCA2-217ENST00000479446 SYAP1Q96A49 352 aaPredicted RBP24.62■■□□□ 1.53
ABCA2-217ENST00000479446 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
ABCA2-217ENST00000479446 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
ABCA2-217ENST00000479446 MYBBP1AQ9BQG0 1328 aaKnown RBP24.62■■□□□ 1.53
ABCA2-217ENST00000479446 CLUAP1Q96AJ1 413 aa24.62■■□□□ 1.53
ABCA2-217ENST00000479446 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
ABCA2-217ENST00000479446 STK31Q9BXU1 1019 aa24.61■■□□□ 1.53
ABCA2-217ENST00000479446 KIF3BO15066 747 aa24.61■■□□□ 1.53
ABCA2-217ENST00000479446 HNRNPMP52272 730 aaKnown RBP eCLIP24.61■■□□□ 1.53
ABCA2-217ENST00000479446 HMMRO75330 724 aa24.6■■□□□ 1.53
ABCA2-217ENST00000479446 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.53
ABCA2-217ENST00000479446 HTATSF1O43719 755 aaKnown RBP24.58■■□□□ 1.53
ABCA2-217ENST00000479446 GNL2Q13823 731 aaKnown RBP24.58■■□□□ 1.53
ABCA2-217ENST00000479446 WIZO95785 1651 aa24.56■■□□□ 1.52
ABCA2-217ENST00000479446 PRKRIP1Q9H875 184 aaPredicted RBP24.56■■□□□ 1.52
ABCA2-217ENST00000479446 ST20-MTHFSA0A0A6YYL1 179 aa24.55■■□□□ 1.52
ABCA2-217ENST00000479446 HDAC5Q9UQL6 1122 aa24.53■■□□□ 1.52
ABCA2-217ENST00000479446 PAK3O75914 559 aaPredicted RBP24.53■■□□□ 1.52
ABCA2-217ENST00000479446 LMOD3Q0VAK6 560 aa24.53■■□□□ 1.52
ABCA2-217ENST00000479446 CENPQQ7L2Z9 268 aaPredicted RBP24.51■■□□□ 1.51
ABCA2-217ENST00000479446 ZBED9Q6R2W3 1325 aa24.51■■□□□ 1.51
ABCA2-217ENST00000479446 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
ABCA2-217ENST00000479446 PANK3Q9H999 370 aa24.5■■□□□ 1.51
ABCA2-217ENST00000479446 CADPSQ9ULU8 1353 aa24.5■■□□□ 1.51
ABCA2-217ENST00000479446 TRIM6-TRIM34B2RNG4 842 aa24.49■■□□□ 1.51
ABCA2-217ENST00000479446 GPATCH3Q96I76 525 aa24.49■■□□□ 1.51
ABCA2-217ENST00000479446 PDE4AP27815 886 aa24.48■■□□□ 1.51
ABCA2-217ENST00000479446 CCDC144AA2RUR9 1427 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms