RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CDK11AQ9UQ88 783 aaPredicted RBP19.01■□□□□ 0.63
CNKSR3-204ENST00000479339 TTC37Q6PGP7 1564 aa19■□□□□ 0.63
CNKSR3-204ENST00000479339 CASKIN1Q8WXD9 1431 aa19■□□□□ 0.63
CNKSR3-204ENST00000479339 ADGRL1O94910 1474 aa18.99■□□□□ 0.63
CNKSR3-204ENST00000479339 CLIP1P30622 1438 aa18.99■□□□□ 0.63
CNKSR3-204ENST00000479339 CFAP74Q9C0B2 1584 aa18.97■□□□□ 0.63
CNKSR3-204ENST00000479339 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
CNKSR3-204ENST00000479339 AKNAQ7Z591 1439 aa18.96■□□□□ 0.63
CNKSR3-204ENST00000479339 FANCAO15360 1455 aa18.96■□□□□ 0.63
CNKSR3-204ENST00000479339 RAPGEF3O95398 923 aa18.96■□□□□ 0.63
CNKSR3-204ENST00000479339 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
CNKSR3-204ENST00000479339 PLCH2O75038 1416 aa18.95■□□□□ 0.62
CNKSR3-204ENST00000479339 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
CNKSR3-204ENST00000479339 CCDC18Q5T9S5 1454 aa18.94■□□□□ 0.62
CNKSR3-204ENST00000479339 LRRIQ1Q96JM4 1722 aa18.94■□□□□ 0.62
CNKSR3-204ENST00000479339 DENND4BO75064 1496 aaPredicted RBP18.93■□□□□ 0.62
CNKSR3-204ENST00000479339 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
CNKSR3-204ENST00000479339 KIF14Q15058 1648 aa18.91■□□□□ 0.62
CNKSR3-204ENST00000479339 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
CNKSR3-204ENST00000479339 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
CNKSR3-204ENST00000479339 MYO5CQ9NQX4 1742 aa18.86■□□□□ 0.61
CNKSR3-204ENST00000479339 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
CNKSR3-204ENST00000479339 ZMYM4Q5VZL5 1548 aa18.85■□□□□ 0.61
CNKSR3-204ENST00000479339 SCAPERQ9BY12 1400 aa18.84■□□□□ 0.61
CNKSR3-204ENST00000479339 ARHGEF40Q8TER5 1519 aa18.84■□□□□ 0.61
CNKSR3-204ENST00000479339 CEP162Q5TB80 1403 aa18.83■□□□□ 0.61
CNKSR3-204ENST00000479339 POGZQ7Z3K3 1410 aa18.83■□□□□ 0.6
CNKSR3-204ENST00000479339 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
CNKSR3-204ENST00000479339 APLP2Q06481 763 aa18.81■□□□□ 0.6
CNKSR3-204ENST00000479339 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
CNKSR3-204ENST00000479339 ZFYVE16Q7Z3T8 1539 aa18.78■□□□□ 0.6
CNKSR3-204ENST00000479339 YEATS2Q9ULM3 1422 aa18.77■□□□□ 0.59
CNKSR3-204ENST00000479339 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
CNKSR3-204ENST00000479339 PREX2Q70Z35 1606 aa18.76■□□□□ 0.59
CNKSR3-204ENST00000479339 CDC42BPBQ9Y5S2 1711 aa18.76■□□□□ 0.59
CNKSR3-204ENST00000479339 RBM19Q9Y4C8 960 aaKnown RBP18.74■□□□□ 0.59
CNKSR3-204ENST00000479339 BCORL1Q5H9F3 1711 aa18.74■□□□□ 0.59
CNKSR3-204ENST00000479339 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
CNKSR3-204ENST00000479339 ZNF518AQ6AHZ1 1483 aa18.74■□□□□ 0.59
CNKSR3-204ENST00000479339 KDM5CP41229 1560 aa18.72■□□□□ 0.59
CNKSR3-204ENST00000479339 ABCC1P33527 1531 aa18.71■□□□□ 0.59
CNKSR3-204ENST00000479339 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
CNKSR3-204ENST00000479339 GPATCH8Q9UKJ3 1502 aaKnown RBP18.7■□□□□ 0.58
CNKSR3-204ENST00000479339 ATP10AO60312 1499 aa18.7■□□□□ 0.58
CNKSR3-204ENST00000479339 MTUS2Q5JR59 1369 aa18.7■□□□□ 0.58
CNKSR3-204ENST00000479339 AFAP1Q8N556 730 aa18.7■□□□□ 0.58
CNKSR3-204ENST00000479339 PTPRMP28827 1452 aa18.69■□□□□ 0.58
CNKSR3-204ENST00000479339 ARHGEF12Q9NZN5 1544 aa18.68■□□□□ 0.58
CNKSR3-204ENST00000479339 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
CNKSR3-204ENST00000479339 TRAPPC8Q9Y2L5 1435 aa18.67■□□□□ 0.58
CNKSR3-204ENST00000479339 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
CNKSR3-204ENST00000479339 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
CNKSR3-204ENST00000479339 MADDQ8WXG6 1647 aa18.66■□□□□ 0.58
CNKSR3-204ENST00000479339 MLH3Q9UHC1 1453 aa18.66■□□□□ 0.58
CNKSR3-204ENST00000479339 ITSN2Q9NZM3 1697 aa18.66■□□□□ 0.58
CNKSR3-204ENST00000479339 HECW2Q9P2P5 1572 aa18.66■□□□□ 0.58
CNKSR3-204ENST00000479339 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
CNKSR3-204ENST00000479339 FANCIQ9NVI1 1328 aa18.64■□□□□ 0.57
CNKSR3-204ENST00000479339 VPS8Q8N3P4 1428 aa18.64■□□□□ 0.57
CNKSR3-204ENST00000479339 SAMD9LQ8IVG5 1584 aa18.63■□□□□ 0.57
CNKSR3-204ENST00000479339 KIAA1107Q9UPP5 1409 aa18.62■□□□□ 0.57
CNKSR3-204ENST00000479339 CFDP1Q9UEE9 299 aaPredicted RBP18.62■□□□□ 0.57
CNKSR3-204ENST00000479339 REREQ9P2R6 1566 aa18.61■□□□□ 0.57
CNKSR3-204ENST00000479339 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
CNKSR3-204ENST00000479339 PLEKHH2Q8IVE3 1493 aa18.61■□□□□ 0.57
CNKSR3-204ENST00000479339 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
CNKSR3-204ENST00000479339 TIAM1Q13009 1591 aa18.6■□□□□ 0.57
CNKSR3-204ENST00000479339 RIMS1Q86UR5 1692 aaKnown RBP18.59■□□□□ 0.57
CNKSR3-204ENST00000479339 SYCP2Q9BX26 1530 aa18.59■□□□□ 0.57
CNKSR3-204ENST00000479339 ABCA6Q8N139 1617 aa18.58■□□□□ 0.57
CNKSR3-204ENST00000479339 MLECQ14165 292 aa18.57■□□□□ 0.56
CNKSR3-204ENST00000479339 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
CNKSR3-204ENST00000479339 KIDINS220Q9ULH0 1771 aa18.56■□□□□ 0.56
CNKSR3-204ENST00000479339 AGLP35573 1532 aa18.56■□□□□ 0.56
CNKSR3-204ENST00000479339 NEFLP07196 543 aa18.56■□□□□ 0.56
CNKSR3-204ENST00000479339 FKBP8Q14318 412 aa18.56■□□□□ 0.56
CNKSR3-204ENST00000479339 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
CNKSR3-204ENST00000479339 NCOA2Q15596 1464 aa18.54■□□□□ 0.56
CNKSR3-204ENST00000479339 MSH5O43196 834 aa18.54■□□□□ 0.56
CNKSR3-204ENST00000479339 SPAG9O60271 1321 aaKnown RBP18.54■□□□□ 0.56
CNKSR3-204ENST00000479339 SUPT6HQ7KZ85 1726 aaKnown RBP18.54■□□□□ 0.56
CNKSR3-204ENST00000479339 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
CNKSR3-204ENST00000479339 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
CNKSR3-204ENST00000479339 ERICH6BQ5W0A0 696 aa18.52■□□□□ 0.55
CNKSR3-204ENST00000479339 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.55
CNKSR3-204ENST00000479339 BCANQ96GW7 911 aa18.5■□□□□ 0.55
CNKSR3-204ENST00000479339 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
CNKSR3-204ENST00000479339 INO80Q9ULG1 1556 aaPredicted RBP18.5■□□□□ 0.55
CNKSR3-204ENST00000479339 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
CNKSR3-204ENST00000479339 LMTK3Q96Q04 1460 aa18.48■□□□□ 0.55
CNKSR3-204ENST00000479339 CAMSAP2Q08AD1 1489 aa18.45■□□□□ 0.54
CNKSR3-204ENST00000479339 RTEL1-TNFRSF6BF6WH68 1400 aa18.45■□□□□ 0.54
CNKSR3-204ENST00000479339 KANK4Q5T7N3 995 aaPredicted RBP18.45■□□□□ 0.54
CNKSR3-204ENST00000479339 PLPPR3Q6T4P5 718 aa18.44■□□□□ 0.54
CNKSR3-204ENST00000479339 A2MP01023 1474 aa18.44■□□□□ 0.54
CNKSR3-204ENST00000479339 PLXNC1O60486 1568 aa18.44■□□□□ 0.54
CNKSR3-204ENST00000479339 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
CNKSR3-204ENST00000479339 DEKP35659 375 aaKnown RBP18.43■□□□□ 0.54
CNKSR3-204ENST00000479339 CCDC141Q6ZP82 1450 aa18.42■□□□□ 0.54
CNKSR3-204ENST00000479339 CNTLNQ9NXG0 1405 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms