RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 DNAJC5Q9H3Z4 198 aa12.12□□□□□ -0.47
HOXB3-209ENST00000478644 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
HOXB3-209ENST00000478644 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
HOXB3-209ENST00000478644 SNPHO15079 494 aa12.09□□□□□ -0.47
HOXB3-209ENST00000478644 NCAPD3P42695 1498 aa12.08□□□□□ -0.47
HOXB3-209ENST00000478644 POTEMA6NI47 508 aa12.05□□□□□ -0.48
HOXB3-209ENST00000478644 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
HOXB3-209ENST00000478644 ST18O60284 1047 aa12.03□□□□□ -0.48
HOXB3-209ENST00000478644 CHGAP10645 457 aaKnown RBP12.03□□□□□ -0.48
HOXB3-209ENST00000478644 SMARCA2P51531 1590 aa12.03□□□□□ -0.48
HOXB3-209ENST00000478644 TMEM92Q6UXU6 159 aa12.01□□□□□ -0.49
HOXB3-209ENST00000478644 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
HOXB3-209ENST00000478644 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
HOXB3-209ENST00000478644 ATAD2BQ9ULI0 1458 aa11.98□□□□□ -0.49
HOXB3-209ENST00000478644 PCDH10Q9P2E7 1040 aa11.96□□□□□ -0.49
HOXB3-209ENST00000478644 SMARCA4P51532 1647 aa11.96□□□□□ -0.5
HOXB3-209ENST00000478644 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
HOXB3-209ENST00000478644 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
HOXB3-209ENST00000478644 PPP1R37O75864 691 aa11.94□□□□□ -0.5
HOXB3-209ENST00000478644 AMER1Q5JTC6 1135 aaPredicted RBP11.93□□□□□ -0.5
HOXB3-209ENST00000478644 PEG3Q9GZU2 1588 aa11.92□□□□□ -0.5
HOXB3-209ENST00000478644 CUX2O14529 1486 aa11.91□□□□□ -0.5
HOXB3-209ENST00000478644 KIF3CO14782 793 aa11.91□□□□□ -0.5
HOXB3-209ENST00000478644 RYDENQ9NUL5 291 aaKnown RBP11.91□□□□□ -0.5
HOXB3-209ENST00000478644 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
HOXB3-209ENST00000478644 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
HOXB3-209ENST00000478644 ERCC6Q03468 1493 aa11.88□□□□□ -0.51
HOXB3-209ENST00000478644 ZSWIM6Q9HCJ5 1215 aa11.84□□□□□ -0.51
HOXB3-209ENST00000478644 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
HOXB3-209ENST00000478644 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
HOXB3-209ENST00000478644 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
HOXB3-209ENST00000478644 GTPBP6O43824 516 aaPredicted RBP11.82□□□□□ -0.52
HOXB3-209ENST00000478644 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
HOXB3-209ENST00000478644 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
HOXB3-209ENST00000478644 MARVELD3Q96A59 401 aa11.81□□□□□ -0.52
HOXB3-209ENST00000478644 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
HOXB3-209ENST00000478644 GPR153Q6NV75 609 aa11.78□□□□□ -0.52
HOXB3-209ENST00000478644 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
HOXB3-209ENST00000478644 TMC2Q8TDI7 906 aa11.78□□□□□ -0.52
HOXB3-209ENST00000478644 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.52
HOXB3-209ENST00000478644 EMP3P54852 163 aa11.77□□□□□ -0.53
HOXB3-209ENST00000478644 MROH2BQ7Z745 1585 aa11.76□□□□□ -0.53
HOXB3-209ENST00000478644 SLC34A2O95436 690 aa11.76□□□□□ -0.53
HOXB3-209ENST00000478644 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
HOXB3-209ENST00000478644 SLC24A1O60721 1099 aa11.75□□□□□ -0.53
HOXB3-209ENST00000478644 FOXK1P85037 733 aa11.73□□□□□ -0.53
HOXB3-209ENST00000478644 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
HOXB3-209ENST00000478644 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
HOXB3-209ENST00000478644 BBXQ8WY36 941 aaPredicted RBP11.72□□□□□ -0.53
HOXB3-209ENST00000478644 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
HOXB3-209ENST00000478644 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
HOXB3-209ENST00000478644 NESP48681 1621 aa11.69□□□□□ -0.54
HOXB3-209ENST00000478644 FAM205CA6NFA0 338 aa11.69□□□□□ -0.54
HOXB3-209ENST00000478644 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
HOXB3-209ENST00000478644 ARSIQ5FYB1 569 aa11.68□□□□□ -0.54
HOXB3-209ENST00000478644 DSG2Q14126 1118 aa11.66□□□□□ -0.54
HOXB3-209ENST00000478644 PLPP6Q8IY26 295 aa11.65□□□□□ -0.54
HOXB3-209ENST00000478644 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
HOXB3-209ENST00000478644 ERBB3P21860 1342 aa11.64□□□□□ -0.55
HOXB3-209ENST00000478644 PDE4AP27815 886 aa11.63□□□□□ -0.55
HOXB3-209ENST00000478644 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
HOXB3-209ENST00000478644 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
HOXB3-209ENST00000478644 NCKAP5LQ9HCH0 1330 aa11.62□□□□□ -0.55
HOXB3-209ENST00000478644 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.55
HOXB3-209ENST00000478644 WIZO95785 1651 aa11.61□□□□□ -0.55
HOXB3-209ENST00000478644 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
HOXB3-209ENST00000478644 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
HOXB3-209ENST00000478644 KRTAP3-2Q9BYR7 98 aa11.6□□□□□ -0.55
HOXB3-209ENST00000478644 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
HOXB3-209ENST00000478644 PLSCR2Q9NRY7 297 aa11.59□□□□□ -0.55
HOXB3-209ENST00000478644 RSF1Q96T23 1441 aaPredicted RBP11.59□□□□□ -0.55
HOXB3-209ENST00000478644 MRC2Q9UBG0 1479 aa11.58□□□□□ -0.56
HOXB3-209ENST00000478644 VARS2Q5ST30 1063 aaKnown RBP11.58□□□□□ -0.56
HOXB3-209ENST00000478644 KIF21AQ7Z4S6 1674 aa11.57□□□□□ -0.56
HOXB3-209ENST00000478644 MFSD10Q14728 455 aa11.57□□□□□ -0.56
HOXB3-209ENST00000478644 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
HOXB3-209ENST00000478644 CFTRP13569 1480 aa11.57□□□□□ -0.56
HOXB3-209ENST00000478644 TOP2AP11388 1531 aaKnown RBP11.56□□□□□ -0.56
HOXB3-209ENST00000478644 NUDT7P0C024 238 aa11.56□□□□□ -0.56
HOXB3-209ENST00000478644 PPP1R15BQ5SWA1 713 aa11.56□□□□□ -0.56
HOXB3-209ENST00000478644 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
HOXB3-209ENST00000478644 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
HOXB3-209ENST00000478644 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
HOXB3-209ENST00000478644 OXER1Q8TDS5 423 aa11.54□□□□□ -0.56
HOXB3-209ENST00000478644 WDR62O43379 1518 aa11.54□□□□□ -0.56
HOXB3-209ENST00000478644 TBC1D12O60347 775 aa11.53□□□□□ -0.56
HOXB3-209ENST00000478644 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
HOXB3-209ENST00000478644 LARP6Q9BRS8 491 aaKnown RBP11.52□□□□□ -0.57
HOXB3-209ENST00000478644 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
HOXB3-209ENST00000478644 SPNS2Q8IVW8 549 aa11.51□□□□□ -0.57
HOXB3-209ENST00000478644 DDX27Q96GQ7 796 aaKnown RBP11.51□□□□□ -0.57
HOXB3-209ENST00000478644 LHX6Q9UPM6 363 aa11.51□□□□□ -0.57
HOXB3-209ENST00000478644 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
HOXB3-209ENST00000478644 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
HOXB3-209ENST00000478644 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
HOXB3-209ENST00000478644 PBX2P40425 430 aa11.43□□□□□ -0.58
HOXB3-209ENST00000478644 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
HOXB3-209ENST00000478644 MMRN1Q13201 1228 aa11.42□□□□□ -0.58
HOXB3-209ENST00000478644 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
HOXB3-209ENST00000478644 PRDM2Q13029 1718 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms