RNA–Protein interactions for RNA: ENST00000478389.5

NELFCD-206, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 3,581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-206ENST00000478389 RAD54L2Q9Y4B4 1467 aa11.35□□□□□ -0.59
NELFCD-206ENST00000478389 GLIPR1L2Q4G1C9 344 aa11.34□□□□□ -0.59
NELFCD-206ENST00000478389 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
NELFCD-206ENST00000478389 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
NELFCD-206ENST00000478389 CHMP7Q8WUX9 453 aaPredicted RBP11.33□□□□□ -0.6
NELFCD-206ENST00000478389 FAM50AQ14320 339 aaKnown RBP11.33□□□□□ -0.6
NELFCD-206ENST00000478389 MAPKBP1O60336 1514 aa11.33□□□□□ -0.6
NELFCD-206ENST00000478389 PPM1GO15355 546 aaPredicted RBP11.32□□□□□ -0.6
NELFCD-206ENST00000478389 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
NELFCD-206ENST00000478389 RAB3GAP2Q9H2M9 1393 aa11.32□□□□□ -0.6
NELFCD-206ENST00000478389 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
NELFCD-206ENST00000478389 WASHC2CQ9Y4E1 1318 aa11.31□□□□□ -0.6
NELFCD-206ENST00000478389 RSPH6AQ9H0K4 717 aa11.31□□□□□ -0.6
NELFCD-206ENST00000478389 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.62e-8■■■■□ 24.7
NELFCD-206ENST00000478389 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
NELFCD-206ENST00000478389 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
NELFCD-206ENST00000478389 KANK4Q5T7N3 995 aaPredicted RBP11.31□□□□□ -0.6
NELFCD-206ENST00000478389 CUX1P39880 1505 aa11.3□□□□□ -0.6
NELFCD-206ENST00000478389 NEFMP07197 916 aa11.29□□□□□ -0.6
NELFCD-206ENST00000478389 POLA1P09884 1462 aaPredicted RBP11.29□□□□□ -0.6
NELFCD-206ENST00000478389 BCCIPQ9P287 314 aaKnown RBP eCLIP11.29□□□□□ -0.6
NELFCD-206ENST00000478389 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
NELFCD-206ENST00000478389 NPM3O75607 178 aaKnown RBP11.28□□□□□ -0.6
NELFCD-206ENST00000478389 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
NELFCD-206ENST00000478389 SETD5Q9C0A6 1442 aa11.27□□□□□ -0.6
NELFCD-206ENST00000478389 HMGB1P09429 215 aaKnown RBP11.27□□□□□ -0.6
NELFCD-206ENST00000478389 SIN3AQ96ST3 1273 aa11.27□□□□□ -0.61
NELFCD-206ENST00000478389 ZNF326Q5BKZ1 582 aaKnown RBP11.26□□□□□ -0.61
NELFCD-206ENST00000478389 THOC2Q8NI27 1593 aaKnown RBP11.26□□□□□ -0.61
NELFCD-206ENST00000478389 WDR62O43379 1518 aa11.26□□□□□ -0.61
NELFCD-206ENST00000478389 RAPGEF2Q9Y4G8 1499 aa11.26□□□□□ -0.61
NELFCD-206ENST00000478389 ZNF608Q9ULD9 1512 aaPredicted RBP11.26□□□□□ -0.61
NELFCD-206ENST00000478389 ARID3CA6NKF2 412 aa11.25□□□□□ -0.61
NELFCD-206ENST00000478389 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.25□□□□□ -0.61
NELFCD-206ENST00000478389 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
NELFCD-206ENST00000478389 ZBED9Q6R2W3 1325 aa11.24□□□□□ -0.61
NELFCD-206ENST00000478389 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
NELFCD-206ENST00000478389 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
NELFCD-206ENST00000478389 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
NELFCD-206ENST00000478389 CNPY4Q8N129 248 aa11.23□□□□□ -0.61
NELFCD-206ENST00000478389 RBM25P49756 843 aaKnown RBP11.21□□□□□ -0.61
NELFCD-206ENST00000478389 GSE1Q14687 1217 aa11.21□□□□□ -0.61
NELFCD-206ENST00000478389 PUS7Q96PZ0 661 aaKnown RBP11.21□□□□□ -0.61
NELFCD-206ENST00000478389 ZBTB7CA1YPR0 619 aa11.21□□□□□ -0.62
NELFCD-206ENST00000478389 TONSLQ96HA7 1378 aa11.21□□□□□ -0.62
NELFCD-206ENST00000478389 KIF27Q86VH2 1401 aa11.2□□□□□ -0.62
NELFCD-206ENST00000478389 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
NELFCD-206ENST00000478389 PRDM2Q13029 1718 aa11.2□□□□□ -0.62
NELFCD-206ENST00000478389 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
NELFCD-206ENST00000478389 LAS1LQ9Y4W2 734 aaKnown RBP11.19□□□□□ -0.62
NELFCD-206ENST00000478389 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
NELFCD-206ENST00000478389 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
NELFCD-206ENST00000478389 ERICH3Q5RHP9 1530 aa11.19□□□□□ -0.62
NELFCD-206ENST00000478389 FAM43AQ8N2R8 423 aa11.18□□□□□ -0.62
NELFCD-206ENST00000478389 DDRGK1Q96HY6 314 aa11.18□□□□□ -0.62
NELFCD-206ENST00000478389 PRXQ9BXM0 1461 aa11.18□□□□□ -0.62
NELFCD-206ENST00000478389 RAD21O60216 631 aa11.17□□□□□ -0.62
NELFCD-206ENST00000478389 TCERG1O14776 1098 aaKnown RBP11.16□□□□□ -0.62
NELFCD-206ENST00000478389 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
NELFCD-206ENST00000478389 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
NELFCD-206ENST00000478389 FHAD1B1AJZ9 1412 aa11.16□□□□□ -0.62
NELFCD-206ENST00000478389 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
NELFCD-206ENST00000478389 ARID4BQ4LE39 1312 aaPredicted RBP11.15□□□□□ -0.62
NELFCD-206ENST00000478389 CERS3Q8IU89 383 aa11.15□□□□□ -0.62
NELFCD-206ENST00000478389 ZMYND15Q9H091 742 aa11.13□□□□□ -0.63
NELFCD-206ENST00000478389 SMG6Q86US8 1419 aaKnown RBP11.13□□□□□ -0.63
NELFCD-206ENST00000478389 FAM9BQ8IZU0 186 aa11.13□□□□□ -0.63
NELFCD-206ENST00000478389 MRS2Q9HD23 443 aa11.13□□□□□ -0.63
NELFCD-206ENST00000478389 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
NELFCD-206ENST00000478389 CARMIL1Q5VZK9 1371 aa11.12□□□□□ -0.63
NELFCD-206ENST00000478389 SNAPC4Q5SXM2 1469 aa11.12□□□□□ -0.63
NELFCD-206ENST00000478389 MS4A1P11836 297 aa11.12□□□□□ -0.63
NELFCD-206ENST00000478389 KCTD17Q8N5Z5 321 aa11.12□□□□□ -0.63
NELFCD-206ENST00000478389 NCLP19338 710 aaKnown RBP11.11□□□□□ -0.63
NELFCD-206ENST00000478389 PSMD1Q99460 953 aa11.11□□□□□ -0.63
NELFCD-206ENST00000478389 ABCA10Q8WWZ4 1543 aa11.11□□□□□ -0.63
NELFCD-206ENST00000478389 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
NELFCD-206ENST00000478389 MTMR7Q9Y216 660 aa11.11□□□□□ -0.63
NELFCD-206ENST00000478389 NUDCQ9Y266 331 aa11.11□□□□□ -0.63
NELFCD-206ENST00000478389 RNF123Q5XPI4 1314 aa11.1□□□□□ -0.63
NELFCD-206ENST00000478389 IGF1RP08069 1367 aa11.1□□□□□ -0.63
NELFCD-206ENST00000478389 CNTLNQ9NXG0 1405 aa11.1□□□□□ -0.63
NELFCD-206ENST00000478389 NAP1L2Q9ULW6 460 aaPredicted RBP11.1□□□□□ -0.63
NELFCD-206ENST00000478389 MAP3K1Q13233 1512 aa11.1□□□□□ -0.63
NELFCD-206ENST00000478389 PDE4AP27815 886 aa11.08□□□□□ -0.63
NELFCD-206ENST00000478389 WWC1Q8IX03 1113 aa11.08□□□□□ -0.64
NELFCD-206ENST00000478389 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
NELFCD-206ENST00000478389 FRAT1Q92837 279 aaPredicted RBP11.07□□□□□ -0.64
NELFCD-206ENST00000478389 PRKRIP1Q9H875 184 aaPredicted RBP11.07□□□□□ -0.64
NELFCD-206ENST00000478389 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
NELFCD-206ENST00000478389 NFKBIBQ15653 356 aa11.07□□□□□ -0.64
NELFCD-206ENST00000478389 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
NELFCD-206ENST00000478389 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
NELFCD-206ENST00000478389 NCOA2Q15596 1464 aa11.06□□□□□ -0.64
NELFCD-206ENST00000478389 BACH2Q9BYV9 841 aa11.06□□□□□ -0.64
NELFCD-206ENST00000478389 AKNAQ7Z591 1439 aa11.05□□□□□ -0.64
NELFCD-206ENST00000478389 PRDM16Q9HAZ2 1276 aa11.05□□□□□ -0.64
NELFCD-206ENST00000478389 EIF4G2P78344 907 aaKnown RBP eCLIP11.05□□□□□ -0.64
NELFCD-206ENST00000478389 DNAJC5Q9H3Z4 198 aa11.04□□□□□ -0.64
NELFCD-206ENST00000478389 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms