RNA–Protein interactions for RNA: ENST00000478251.1

GFM1-206, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-206ENST00000478251 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
GFM1-206ENST00000478251 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
GFM1-206ENST00000478251 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
GFM1-206ENST00000478251 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
GFM1-206ENST00000478251 DNMT1P26358 1616 aaKnown RBP17.17■□□□□ 0.34
GFM1-206ENST00000478251 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
GFM1-206ENST00000478251 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
GFM1-206ENST00000478251 CROCC2H7BZ55 1655 aa17.14■□□□□ 0.33
GFM1-206ENST00000478251 ZNF777Q9ULD5 760 aaPredicted RBP17.14■□□□□ 0.33
GFM1-206ENST00000478251 PLCH2O75038 1416 aa17.14■□□□□ 0.33
GFM1-206ENST00000478251 ABCC5O15440 1437 aa17.13■□□□□ 0.33
GFM1-206ENST00000478251 DAPK1P53355 1430 aa17.13■□□□□ 0.33
GFM1-206ENST00000478251 MBD5Q9P267 1494 aa17.11■□□□□ 0.33
GFM1-206ENST00000478251 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
GFM1-206ENST00000478251 ARHGEF12Q9NZN5 1544 aa17.1■□□□□ 0.33
GFM1-206ENST00000478251 ARAP3Q8WWN8 1544 aa17.09■□□□□ 0.33
GFM1-206ENST00000478251 ARHGEF5Q12774 1597 aa17.07■□□□□ 0.32
GFM1-206ENST00000478251 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
GFM1-206ENST00000478251 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
GFM1-206ENST00000478251 ABCC1P33527 1531 aa17.07■□□□□ 0.32
GFM1-206ENST00000478251 KDM6BO15054 1643 aa17.06■□□□□ 0.32
GFM1-206ENST00000478251 MAP3K4Q9Y6R4 1608 aa17.06■□□□□ 0.32
GFM1-206ENST00000478251 GCC2Q8IWJ2 1684 aa17.06■□□□□ 0.32
GFM1-206ENST00000478251 RAB3GAP2Q9H2M9 1393 aa17.05■□□□□ 0.32
GFM1-206ENST00000478251 HFM1A2PYH4 1435 aa17.05■□□□□ 0.32
GFM1-206ENST00000478251 NAIPQ13075 1403 aa17.05■□□□□ 0.32
GFM1-206ENST00000478251 HNRNPMP52272 730 aaKnown RBP eCLIP17.05■□□□□ 0.32
GFM1-206ENST00000478251 ADGBQ8N7X0 1667 aa17.04■□□□□ 0.32
GFM1-206ENST00000478251 AKNAQ7Z591 1439 aa17.04■□□□□ 0.32
GFM1-206ENST00000478251 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
GFM1-206ENST00000478251 FANCAO15360 1455 aa17.04■□□□□ 0.32
GFM1-206ENST00000478251 KIF13AQ9H1H9 1805 aa17.04■□□□□ 0.32
GFM1-206ENST00000478251 GLI2P10070 1586 aa17.03■□□□□ 0.32
GFM1-206ENST00000478251 CD109Q6YHK3 1445 aa17.02■□□□□ 0.32
GFM1-206ENST00000478251 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
GFM1-206ENST00000478251 RRP7BPQ9NSQ0 103 aa17.01■□□□□ 0.31
GFM1-206ENST00000478251 CCDC141Q6ZP82 1450 aa17.01■□□□□ 0.31
GFM1-206ENST00000478251 SHANK2Q9UPX8 1470 aa17.01■□□□□ 0.31
GFM1-206ENST00000478251 DNAJC5Q9H3Z4 198 aa17.01■□□□□ 0.31
GFM1-206ENST00000478251 ADGRL2O95490 1459 aa17■□□□□ 0.31
GFM1-206ENST00000478251 EFCAB2Q5VUJ9 269 aa17■□□□□ 0.31
GFM1-206ENST00000478251 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
GFM1-206ENST00000478251 TRAPPC8Q9Y2L5 1435 aa17■□□□□ 0.31
GFM1-206ENST00000478251 C9orf84Q5VXU9 1444 aa16.99■□□□□ 0.31
GFM1-206ENST00000478251 ROCK1Q13464 1354 aa16.99■□□□□ 0.31
GFM1-206ENST00000478251 NCOA1Q15788 1441 aa16.99■□□□□ 0.31
GFM1-206ENST00000478251 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
GFM1-206ENST00000478251 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
GFM1-206ENST00000478251 MAST1Q9Y2H9 1570 aa16.96■□□□□ 0.31
GFM1-206ENST00000478251 ADGRL1O94910 1474 aa16.96■□□□□ 0.31
GFM1-206ENST00000478251 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
GFM1-206ENST00000478251 FAM69CQ0P6D2 419 aa16.94■□□□□ 0.3
GFM1-206ENST00000478251 CFAP74Q9C0B2 1584 aa16.94■□□□□ 0.3
GFM1-206ENST00000478251 HRCP23327 699 aa16.93■□□□□ 0.3
GFM1-206ENST00000478251 CCER1Q8TC90 406 aaPredicted RBP16.92■□□□□ 0.3
GFM1-206ENST00000478251 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
GFM1-206ENST00000478251 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
GFM1-206ENST00000478251 ZFYVE16Q7Z3T8 1539 aa16.91■□□□□ 0.3
GFM1-206ENST00000478251 PLXNC1O60486 1568 aa16.91■□□□□ 0.3
GFM1-206ENST00000478251 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
GFM1-206ENST00000478251 ANKRD30AQ9BXX3 1397 aa16.9■□□□□ 0.3
GFM1-206ENST00000478251 NEO1Q92859 1461 aa16.89■□□□□ 0.29
GFM1-206ENST00000478251 TSPY4P0CV99 314 aa16.89■□□□□ 0.29
GFM1-206ENST00000478251 TSPY10P0CW01 314 aa16.89■□□□□ 0.29
GFM1-206ENST00000478251 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
GFM1-206ENST00000478251 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
GFM1-206ENST00000478251 RICTORQ6R327 1708 aa16.87■□□□□ 0.29
GFM1-206ENST00000478251 KIDINS220Q9ULH0 1771 aa16.87■□□□□ 0.29
GFM1-206ENST00000478251 POGZQ7Z3K3 1410 aa16.87■□□□□ 0.29
GFM1-206ENST00000478251 DENND4BO75064 1496 aaPredicted RBP16.87■□□□□ 0.29
GFM1-206ENST00000478251 KDM5CP41229 1560 aa16.87■□□□□ 0.29
GFM1-206ENST00000478251 PHF23Q9BUL5 403 aaPredicted RBP16.86■□□□□ 0.29
GFM1-206ENST00000478251 FRMPD1Q5SYB0 1578 aa16.86■□□□□ 0.29
GFM1-206ENST00000478251 ATP7AQ04656 1500 aa16.86■□□□□ 0.29
GFM1-206ENST00000478251 ANKRD50Q9ULJ7 1429 aa16.86■□□□□ 0.29
GFM1-206ENST00000478251 ZNF518AQ6AHZ1 1483 aa16.84■□□□□ 0.29
GFM1-206ENST00000478251 SPAG9O60271 1321 aaKnown RBP16.83■□□□□ 0.28
GFM1-206ENST00000478251 RTEL1-TNFRSF6BF6WH68 1400 aa16.82■□□□□ 0.28
GFM1-206ENST00000478251 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
GFM1-206ENST00000478251 HECW2Q9P2P5 1572 aa16.8■□□□□ 0.28
GFM1-206ENST00000478251 DUOX2Q9NRD8 1548 aa16.8■□□□□ 0.28
GFM1-206ENST00000478251 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
GFM1-206ENST00000478251 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
GFM1-206ENST00000478251 PZPP20742 1482 aa16.78■□□□□ 0.28
GFM1-206ENST00000478251 TEX14Q8IWB6 1497 aa16.78■□□□□ 0.28
GFM1-206ENST00000478251 MLH3Q9UHC1 1453 aa16.77■□□□□ 0.28
GFM1-206ENST00000478251 UNC13BO14795 1591 aa16.76■□□□□ 0.27
GFM1-206ENST00000478251 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
GFM1-206ENST00000478251 TRIM52Q96A61 297 aa16.75■□□□□ 0.27
GFM1-206ENST00000478251 KDM5DQ9BY66 1539 aa16.74■□□□□ 0.27
GFM1-206ENST00000478251 DIP2CQ9Y2E4 1556 aa16.74■□□□□ 0.27
GFM1-206ENST00000478251 ZMYM4Q5VZL5 1548 aa16.73■□□□□ 0.27
GFM1-206ENST00000478251 YEATS2Q9ULM3 1422 aa16.73■□□□□ 0.27
GFM1-206ENST00000478251 MAGI2Q86UL8 1455 aa16.73■□□□□ 0.27
GFM1-206ENST00000478251 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
GFM1-206ENST00000478251 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
GFM1-206ENST00000478251 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
GFM1-206ENST00000478251 MROH1Q8NDA8 1641 aa16.71■□□□□ 0.27
GFM1-206ENST00000478251 FOXD1Q16676 465 aa16.71■□□□□ 0.27
GFM1-206ENST00000478251 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms