RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 MYO5CQ9NQX4 1742 aa22.19■■□□□ 1.14
RCC1-211ENST00000478232 ARHGEF40Q8TER5 1519 aa22.17■■□□□ 1.14
RCC1-211ENST00000478232 ADAMTSL3P82987 1691 aa22.17■■□□□ 1.14
RCC1-211ENST00000478232 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
RCC1-211ENST00000478232 YEATS2Q9ULM3 1422 aa22.16■■□□□ 1.14
RCC1-211ENST00000478232 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
RCC1-211ENST00000478232 PTPRMP28827 1452 aa22.15■■□□□ 1.14
RCC1-211ENST00000478232 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
RCC1-211ENST00000478232 BCORL1Q5H9F3 1711 aa22.12■■□□□ 1.13
RCC1-211ENST00000478232 HECW2Q9P2P5 1572 aa22.11■■□□□ 1.13
RCC1-211ENST00000478232 ATP10AO60312 1499 aa22.1■■□□□ 1.13
RCC1-211ENST00000478232 ZNF518AQ6AHZ1 1483 aa22.1■■□□□ 1.13
RCC1-211ENST00000478232 MYT1LQ9UL68 1186 aa22.09■■□□□ 1.13
RCC1-211ENST00000478232 MLECQ14165 292 aa22.07■■□□□ 1.12
RCC1-211ENST00000478232 CDC42BPBQ9Y5S2 1711 aa22.06■■□□□ 1.12
RCC1-211ENST00000478232 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
RCC1-211ENST00000478232 MADDQ8WXG6 1647 aa22.05■■□□□ 1.12
RCC1-211ENST00000478232 ZNF777Q9ULD5 760 aaPredicted RBP22.04■■□□□ 1.12
RCC1-211ENST00000478232 C9orf84Q5VXU9 1444 aa22.04■■□□□ 1.12
RCC1-211ENST00000478232 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
RCC1-211ENST00000478232 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
RCC1-211ENST00000478232 KDM5CP41229 1560 aa22.02■■□□□ 1.12
RCC1-211ENST00000478232 MLH3Q9UHC1 1453 aa22.02■■□□□ 1.12
RCC1-211ENST00000478232 GPATCH8Q9UKJ3 1502 aaKnown RBP22.01■■□□□ 1.11
RCC1-211ENST00000478232 TRAPPC8Q9Y2L5 1435 aa22.01■■□□□ 1.11
RCC1-211ENST00000478232 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
RCC1-211ENST00000478232 CFDP1Q9UEE9 299 aaPredicted RBP22.01■■□□□ 1.11
RCC1-211ENST00000478232 ARHGEF12Q9NZN5 1544 aa22.01■■□□□ 1.11
RCC1-211ENST00000478232 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
RCC1-211ENST00000478232 ABCC1P33527 1531 aa21.98■■□□□ 1.11
RCC1-211ENST00000478232 SIGLEC1Q9BZZ2 1709 aa21.97■■□□□ 1.11
RCC1-211ENST00000478232 PLPPR3Q6T4P5 718 aa21.97■■□□□ 1.11
RCC1-211ENST00000478232 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
RCC1-211ENST00000478232 RIMS1Q86UR5 1692 aaKnown RBP21.96■■□□□ 1.11
RCC1-211ENST00000478232 HNRNPMP52272 730 aaKnown RBP eCLIP21.96■■□□□ 1.11
RCC1-211ENST00000478232 KIAA1107Q9UPP5 1409 aa21.93■■□□□ 1.1
RCC1-211ENST00000478232 SPAG9O60271 1321 aaKnown RBP21.92■■□□□ 1.1
RCC1-211ENST00000478232 DIP2CQ9Y2E4 1556 aa21.91■■□□□ 1.1
RCC1-211ENST00000478232 PLEKHH2Q8IVE3 1493 aa21.91■■□□□ 1.1
RCC1-211ENST00000478232 ITSN2Q9NZM3 1697 aa21.91■■□□□ 1.1
RCC1-211ENST00000478232 REREQ9P2R6 1566 aa21.91■■□□□ 1.1
RCC1-211ENST00000478232 SAMD9LQ8IVG5 1584 aa21.9■■□□□ 1.1
RCC1-211ENST00000478232 LMTK3Q96Q04 1460 aa21.89■■□□□ 1.09
RCC1-211ENST00000478232 AGLP35573 1532 aa21.87■■□□□ 1.09
RCC1-211ENST00000478232 EHBP1L1Q8N3D4 1523 aa21.87■■□□□ 1.09
RCC1-211ENST00000478232 CEBPAP49715 358 aaPredicted RBP21.87■■□□□ 1.09
RCC1-211ENST00000478232 ESF1Q9H501 851 aaKnown RBP21.87■■□□□ 1.09
RCC1-211ENST00000478232 FER1L4A9Z1Z3 1794 aa21.87■■□□□ 1.09
RCC1-211ENST00000478232 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
RCC1-211ENST00000478232 SYCP2Q9BX26 1530 aa21.85■■□□□ 1.09
RCC1-211ENST00000478232 ZNF644Q9H582 1327 aaPredicted RBP21.85■■□□□ 1.09
RCC1-211ENST00000478232 KIDINS220Q9ULH0 1771 aa21.84■■□□□ 1.09
RCC1-211ENST00000478232 ILDR1Q86SU0 546 aaPredicted RBP21.84■■□□□ 1.09
RCC1-211ENST00000478232 HSPA2P54652 639 aa21.83■■□□□ 1.09
RCC1-211ENST00000478232 VPS8Q8N3P4 1428 aa21.82■■□□□ 1.08
RCC1-211ENST00000478232 TIAM1Q13009 1591 aa21.8■■□□□ 1.08
RCC1-211ENST00000478232 RSPH4AQ5TD94 716 aa21.8■■□□□ 1.08
RCC1-211ENST00000478232 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
RCC1-211ENST00000478232 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
RCC1-211ENST00000478232 ATP7AQ04656 1500 aa21.77■■□□□ 1.08
RCC1-211ENST00000478232 CNTLNQ9NXG0 1405 aa21.76■■□□□ 1.07
RCC1-211ENST00000478232 A2MP01023 1474 aa21.75■■□□□ 1.07
RCC1-211ENST00000478232 SUPT6HQ7KZ85 1726 aaKnown RBP21.74■■□□□ 1.07
RCC1-211ENST00000478232 RTEL1-TNFRSF6BF6WH68 1400 aa21.73■■□□□ 1.07
RCC1-211ENST00000478232 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
RCC1-211ENST00000478232 PPP6R1Q9UPN7 881 aa21.72■■□□□ 1.07
RCC1-211ENST00000478232 INO80Q9ULG1 1556 aaPredicted RBP21.72■■□□□ 1.07
RCC1-211ENST00000478232 MAP3K1Q13233 1512 aa21.71■■□□□ 1.07
RCC1-211ENST00000478232 SETD1BQ9UPS6 1966 aaKnown RBP21.71■■□□□ 1.07
RCC1-211ENST00000478232 KANK4Q5T7N3 995 aaPredicted RBP21.71■■□□□ 1.07
RCC1-211ENST00000478232 GGT6Q6P531 493 aa21.71■■□□□ 1.07
RCC1-211ENST00000478232 UHRF1BP1Q6BDS2 1440 aa21.7■■□□□ 1.06
RCC1-211ENST00000478232 TSPY4P0CV99 314 aa21.69■■□□□ 1.06
RCC1-211ENST00000478232 TSPY10P0CW01 314 aa21.69■■□□□ 1.06
RCC1-211ENST00000478232 ZMYM3Q14202 1370 aa21.69■■□□□ 1.06
RCC1-211ENST00000478232 APLP2Q06481 763 aa21.68■■□□□ 1.06
RCC1-211ENST00000478232 PREX1Q8TCU6 1659 aa21.68■■□□□ 1.06
RCC1-211ENST00000478232 DHX29Q7Z478 1369 aaKnown RBP21.67■■□□□ 1.06
RCC1-211ENST00000478232 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
RCC1-211ENST00000478232 PLXNC1O60486 1568 aa21.66■■□□□ 1.06
RCC1-211ENST00000478232 CAMSAP2Q08AD1 1489 aa21.66■■□□□ 1.06
RCC1-211ENST00000478232 CCDC141Q6ZP82 1450 aa21.66■■□□□ 1.06
RCC1-211ENST00000478232 C3P01024 1663 aa21.66■■□□□ 1.06
RCC1-211ENST00000478232 FBXO41Q8TF61 875 aa21.64■■□□□ 1.05
RCC1-211ENST00000478232 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
RCC1-211ENST00000478232 NPATQ14207 1427 aa21.63■■□□□ 1.05
RCC1-211ENST00000478232 KIF3BO15066 747 aa21.61■■□□□ 1.05
RCC1-211ENST00000478232 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
RCC1-211ENST00000478232 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
RCC1-211ENST00000478232 ARHGEF5Q12774 1597 aa21.59■■□□□ 1.05
RCC1-211ENST00000478232 MYOM3Q5VTT5 1437 aa21.57■■□□□ 1.04
RCC1-211ENST00000478232 CERKQ8TCT0 537 aa21.54■■□□□ 1.04
RCC1-211ENST00000478232 PTPRKQ15262 1439 aa21.54■■□□□ 1.04
RCC1-211ENST00000478232 CLTCQ00610 1675 aaKnown RBP21.53■■□□□ 1.04
RCC1-211ENST00000478232 WASHC2CQ9Y4E1 1318 aa21.53■■□□□ 1.04
RCC1-211ENST00000478232 PTPRTO14522 1441 aa21.5■■□□□ 1.03
RCC1-211ENST00000478232 STRCQ7RTU9 1775 aa21.5■■□□□ 1.03
RCC1-211ENST00000478232 MAST1Q9Y2H9 1570 aa21.47■■□□□ 1.03
RCC1-211ENST00000478232 NCOA1Q15788 1441 aa21.46■■□□□ 1.03
RCC1-211ENST00000478232 FAM135AQ9P2D6 1515 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms