RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 WDR7Q9Y4E6 1490 aa7.16□□□□□ -1.26
POLR2B-208ENST00000478188 ATP10BO94823 1461 aa7.16□□□□□ -1.26
POLR2B-208ENST00000478188 FHOD3Q2V2M9 1422 aa7.16□□□□□ -1.26
POLR2B-208ENST00000478188 AKT1S1Q96B36 256 aa7.14□□□□□ -1.27
POLR2B-208ENST00000478188 ADGRL1O94910 1474 aa7.14□□□□□ -1.27
POLR2B-208ENST00000478188 CHRDL2Q6WN34 429 aa7.13□□□□□ -1.27
POLR2B-208ENST00000478188 PCF11O94913 1555 aaKnown RBP7.13□□□□□ -1.27
POLR2B-208ENST00000478188 HECW1Q76N89 1606 aa7.12□□□□□ -1.27
POLR2B-208ENST00000478188 MAGI3Q5TCQ9 1506 aa7.12□□□□□ -1.27
POLR2B-208ENST00000478188 FRMPD1Q5SYB0 1578 aa7.11□□□□□ -1.27
POLR2B-208ENST00000478188 TTC37Q6PGP7 1564 aa7.11□□□□□ -1.27
POLR2B-208ENST00000478188 COL17A1Q9UMD9 1497 aaPredicted RBP7.11□□□□□ -1.27
POLR2B-208ENST00000478188 CDK13Q14004 1512 aaKnown RBP7.11□□□□□ -1.27
POLR2B-208ENST00000478188 FAM9AQ8IZU1 332 aaPredicted RBP7.1□□□□□ -1.27
POLR2B-208ENST00000478188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.09□□□□□ -1.27
POLR2B-208ENST00000478188 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.28
POLR2B-208ENST00000478188 IQSEC2Q5JU85 1478 aa7.09□□□□□ -1.28
POLR2B-208ENST00000478188 KIF14Q15058 1648 aa7.09□□□□□ -1.28
POLR2B-208ENST00000478188 RICTORQ6R327 1708 aa7.08□□□□□ -1.28
POLR2B-208ENST00000478188 FMN1Q68DA7 1419 aa7.07□□□□□ -1.28
POLR2B-208ENST00000478188 ARAP3Q8WWN8 1544 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 TEX14Q8IWB6 1497 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 CASKIN1Q8WXD9 1431 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 NPM1P06748 294 aaKnown RBP eCLIP7.06□□□□□ -1.28
POLR2B-208ENST00000478188 P3H3Q8IVL6 736 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 MYO5CQ9NQX4 1742 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 FYCO1Q9BQS8 1478 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 CDC42BPBQ9Y5S2 1711 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 CFAP74Q9C0B2 1584 aa7.06□□□□□ -1.28
POLR2B-208ENST00000478188 SIGLEC1Q9BZZ2 1709 aa7.05□□□□□ -1.28
POLR2B-208ENST00000478188 TTBK1Q5TCY1 1321 aaPredicted RBP7.05□□□□□ -1.28
POLR2B-208ENST00000478188 CDC42BPAQ5VT25 1732 aa7.05□□□□□ -1.28
POLR2B-208ENST00000478188 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
POLR2B-208ENST00000478188 REM2Q8IYK8 340 aaPredicted RBP7.04□□□□□ -1.28
POLR2B-208ENST00000478188 CD109Q6YHK3 1445 aa7.04□□□□□ -1.28
POLR2B-208ENST00000478188 ZMYM4Q5VZL5 1548 aa7.04□□□□□ -1.28
POLR2B-208ENST00000478188 NEO1Q92859 1461 aa7.04□□□□□ -1.28
POLR2B-208ENST00000478188 CCDC18Q5T9S5 1454 aa7.03□□□□□ -1.28
POLR2B-208ENST00000478188 CLIP1P30622 1438 aa7.03□□□□□ -1.28
POLR2B-208ENST00000478188 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
POLR2B-208ENST00000478188 CEP162Q5TB80 1403 aa7.02□□□□□ -1.29
POLR2B-208ENST00000478188 ADAMTSL3P82987 1691 aa7.01□□□□□ -1.29
POLR2B-208ENST00000478188 ARHGEF40Q8TER5 1519 aa7.01□□□□□ -1.29
POLR2B-208ENST00000478188 TROQ12816 1431 aaPredicted RBP7.01□□□□□ -1.29
POLR2B-208ENST00000478188 SPDYE2BA6NHP3 402 aa7.01□□□□□ -1.29
POLR2B-208ENST00000478188 SPDYE6P0CI01 402 aa7.01□□□□□ -1.29
POLR2B-208ENST00000478188 SPDYE2Q495Y8 402 aa7.01□□□□□ -1.29
POLR2B-208ENST00000478188 KDM5CP41229 1560 aa7□□□□□ -1.29
POLR2B-208ENST00000478188 UBTFP17480 764 aaKnown RBP6.99□□□□□ -1.29
POLR2B-208ENST00000478188 ABCC1P33527 1531 aa6.99□□□□□ -1.29
POLR2B-208ENST00000478188 ILDR2Q71H61 639 aa6.99□□□□□ -1.29
POLR2B-208ENST00000478188 PHLDB1Q86UU1 1377 aa6.99□□□□□ -1.29
POLR2B-208ENST00000478188 PLCH2O75038 1416 aa6.99□□□□□ -1.29
POLR2B-208ENST00000478188 TIAM1Q13009 1591 aa6.99□□□□□ -1.29
POLR2B-208ENST00000478188 SAMD9LQ8IVG5 1584 aa6.98□□□□□ -1.29
POLR2B-208ENST00000478188 ARID3CA6NKF2 412 aa6.98□□□□□ -1.29
POLR2B-208ENST00000478188 FANCAO15360 1455 aa6.98□□□□□ -1.29
POLR2B-208ENST00000478188 BCORL1Q5H9F3 1711 aa6.97□□□□□ -1.29
POLR2B-208ENST00000478188 EHBP1L1Q8N3D4 1523 aa6.97□□□□□ -1.29
POLR2B-208ENST00000478188 RANGAP1P46060 587 aaPredicted RBP6.97□□□□□ -1.29
POLR2B-208ENST00000478188 ARHGEF12Q9NZN5 1544 aa6.97□□□□□ -1.29
POLR2B-208ENST00000478188 POGZQ7Z3K3 1410 aa6.96□□□□□ -1.29
POLR2B-208ENST00000478188 AKNAQ7Z591 1439 aa6.96□□□□□ -1.29
POLR2B-208ENST00000478188 REREQ9P2R6 1566 aa6.96□□□□□ -1.3
POLR2B-208ENST00000478188 MAP3K1Q13233 1512 aa6.96□□□□□ -1.3
POLR2B-208ENST00000478188 ABCA6Q8N139 1617 aa6.96□□□□□ -1.3
POLR2B-208ENST00000478188 PITPNM1O00562 1244 aa6.95□□□□□ -1.3
POLR2B-208ENST00000478188 KCNH8Q96L42 1107 aa6.95□□□□□ -1.3
POLR2B-208ENST00000478188 KIDINS220Q9ULH0 1771 aa6.95□□□□□ -1.3
POLR2B-208ENST00000478188 VPS8Q8N3P4 1428 aa6.95□□□□□ -1.3
POLR2B-208ENST00000478188 INO80Q9ULG1 1556 aaPredicted RBP6.95□□□□□ -1.3
POLR2B-208ENST00000478188 DIP2CQ9Y2E4 1556 aa6.95□□□□□ -1.3
POLR2B-208ENST00000478188 GPATCH8Q9UKJ3 1502 aaKnown RBP6.94□□□□□ -1.3
POLR2B-208ENST00000478188 SUPT6HQ7KZ85 1726 aaKnown RBP6.94□□□□□ -1.3
POLR2B-208ENST00000478188 DENND4BO75064 1496 aaPredicted RBP6.94□□□□□ -1.3
POLR2B-208ENST00000478188 ZFYVE16Q7Z3T8 1539 aa6.93□□□□□ -1.3
POLR2B-208ENST00000478188 PIP4P2Q8N4L2 257 aa6.93□□□□□ -1.3
POLR2B-208ENST00000478188 PLEKHD1A6NEE1 506 aa6.93□□□□□ -1.3
POLR2B-208ENST00000478188 MAGI2Q86UL8 1455 aa6.93□□□□□ -1.3
POLR2B-208ENST00000478188 ARHGAP5Q13017 1502 aa6.93□□□□□ -1.3
POLR2B-208ENST00000478188 PLXNC1O60486 1568 aa6.92□□□□□ -1.3
POLR2B-208ENST00000478188 ZNF692Q9BU19 519 aaPredicted RBP6.92□□□□□ -1.3
POLR2B-208ENST00000478188 YEATS2Q9ULM3 1422 aa6.92□□□□□ -1.3
POLR2B-208ENST00000478188 ADGBQ8N7X0 1667 aa6.92□□□□□ -1.3
POLR2B-208ENST00000478188 MADDQ8WXG6 1647 aa6.92□□□□□ -1.3
POLR2B-208ENST00000478188 DISP3Q9P2K9 1392 aa6.91□□□□□ -1.3
POLR2B-208ENST00000478188 SYCP2Q9BX26 1530 aa6.91□□□□□ -1.3
POLR2B-208ENST00000478188 LOC105371045A0A1W2PR82 267 aa6.91□□□□□ -1.3
POLR2B-208ENST00000478188 MKRN4PQ13434 485 aaPredicted RBP6.91□□□□□ -1.3
POLR2B-208ENST00000478188 LRRC9Q6ZRR7 1453 aa6.91□□□□□ -1.3
POLR2B-208ENST00000478188 MLH3Q9UHC1 1453 aa6.91□□□□□ -1.3
POLR2B-208ENST00000478188 SPDYE1Q8NFV5 336 aaPredicted RBP6.9□□□□□ -1.3
POLR2B-208ENST00000478188 ZNF518AQ6AHZ1 1483 aa6.9□□□□□ -1.3
POLR2B-208ENST00000478188 TRAPPC8Q9Y2L5 1435 aa6.9□□□□□ -1.3
POLR2B-208ENST00000478188 FXR2P51116 673 aaKnown RBP eCLIP6.9□□□□□ -1.32e-7■■□□□ 11.7
POLR2B-208ENST00000478188 CROCC2H7BZ55 1655 aa6.9□□□□□ -1.3
POLR2B-208ENST00000478188 FER1L4A9Z1Z3 1794 aa6.9□□□□□ -1.31
POLR2B-208ENST00000478188 SCAPERQ9BY12 1400 aa6.9□□□□□ -1.31
POLR2B-208ENST00000478188 NCOA2Q15596 1464 aa6.9□□□□□ -1.31
POLR2B-208ENST00000478188 MBD5Q9P267 1494 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms