RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 FAM50AQ14320 339 aaKnown RBP20.28■□□□□ 0.84
LMNA-214ENST00000478063 CAMSAP2Q08AD1 1489 aa20.27■□□□□ 0.84
LMNA-214ENST00000478063 CFDP1Q9UEE9 299 aaPredicted RBP20.26■□□□□ 0.83
LMNA-214ENST00000478063 MAP3K4Q9Y6R4 1608 aa20.26■□□□□ 0.83
LMNA-214ENST00000478063 GLI2P10070 1586 aa20.25■□□□□ 0.83
LMNA-214ENST00000478063 ARAP3Q8WWN8 1544 aa20.25■□□□□ 0.83
LMNA-214ENST00000478063 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
LMNA-214ENST00000478063 TSPOAP1O95153 1857 aa20.24■□□□□ 0.83
LMNA-214ENST00000478063 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.24■□□□□ 0.83
LMNA-214ENST00000478063 PLCH2O75038 1416 aa20.23■□□□□ 0.83
LMNA-214ENST00000478063 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
LMNA-214ENST00000478063 DNMT1P26358 1616 aaKnown RBP20.22■□□□□ 0.83
LMNA-214ENST00000478063 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
LMNA-214ENST00000478063 CFAP74Q9C0B2 1584 aa20.21■□□□□ 0.83
LMNA-214ENST00000478063 ITGAEP38570 1179 aa20.19■□□□□ 0.82
LMNA-214ENST00000478063 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
LMNA-214ENST00000478063 CD109Q6YHK3 1445 aa20.19■□□□□ 0.82
LMNA-214ENST00000478063 FANCAO15360 1455 aa20.16■□□□□ 0.82
LMNA-214ENST00000478063 ABCC1P33527 1531 aa20.16■□□□□ 0.82
LMNA-214ENST00000478063 SYCP2Q9BX26 1530 aa20.16■□□□□ 0.82
LMNA-214ENST00000478063 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
LMNA-214ENST00000478063 EFCAB2Q5VUJ9 269 aa20.15■□□□□ 0.82
LMNA-214ENST00000478063 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
LMNA-214ENST00000478063 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
LMNA-214ENST00000478063 PPRC1Q5VV67 1664 aaKnown RBP20.15■□□□□ 0.82
LMNA-214ENST00000478063 FAM69CQ0P6D2 419 aa20.14■□□□□ 0.81
LMNA-214ENST00000478063 DAPK1P53355 1430 aa20.12■□□□□ 0.81
LMNA-214ENST00000478063 ABCC5O15440 1437 aa20.09■□□□□ 0.81
LMNA-214ENST00000478063 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
LMNA-214ENST00000478063 CCDC141Q6ZP82 1450 aa20.08■□□□□ 0.81
LMNA-214ENST00000478063 PTPRKQ15262 1439 aa20.08■□□□□ 0.8
LMNA-214ENST00000478063 KIAA1107Q9UPP5 1409 aa20.08■□□□□ 0.8
LMNA-214ENST00000478063 GCC2Q8IWJ2 1684 aa20.07■□□□□ 0.8
LMNA-214ENST00000478063 NEO1Q92859 1461 aa20.07■□□□□ 0.8
LMNA-214ENST00000478063 MBD5Q9P267 1494 aa20.07■□□□□ 0.8
LMNA-214ENST00000478063 AKNAQ7Z591 1439 aa20.07■□□□□ 0.8
LMNA-214ENST00000478063 ARHGEF12Q9NZN5 1544 aa20.07■□□□□ 0.8
LMNA-214ENST00000478063 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.8
LMNA-214ENST00000478063 SHANK2Q9UPX8 1470 aa20.05■□□□□ 0.8
LMNA-214ENST00000478063 TEX14Q8IWB6 1497 aa20.05■□□□□ 0.8
LMNA-214ENST00000478063 MAST1Q9Y2H9 1570 aa20.04■□□□□ 0.8
LMNA-214ENST00000478063 CHIC2Q9UKJ5 165 aa20.02■□□□□ 0.8
LMNA-214ENST00000478063 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.79
LMNA-214ENST00000478063 SCAPERQ9BY12 1400 aa20.02■□□□□ 0.79
LMNA-214ENST00000478063 TRAPPC8Q9Y2L5 1435 aa20.01■□□□□ 0.79
LMNA-214ENST00000478063 RICTORQ6R327 1708 aa20■□□□□ 0.79
LMNA-214ENST00000478063 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
LMNA-214ENST00000478063 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
LMNA-214ENST00000478063 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
LMNA-214ENST00000478063 TSPY4P0CV99 314 aa19.97■□□□□ 0.79
LMNA-214ENST00000478063 TSPY10P0CW01 314 aa19.97■□□□□ 0.79
LMNA-214ENST00000478063 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
LMNA-214ENST00000478063 ROCK1Q13464 1354 aa19.96■□□□□ 0.79
LMNA-214ENST00000478063 PLXNC1O60486 1568 aa19.96■□□□□ 0.79
LMNA-214ENST00000478063 HFM1A2PYH4 1435 aa19.96■□□□□ 0.79
LMNA-214ENST00000478063 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
LMNA-214ENST00000478063 POGZQ7Z3K3 1410 aa19.95■□□□□ 0.78
LMNA-214ENST00000478063 SETD5Q9C0A6 1442 aa19.95■□□□□ 0.78
LMNA-214ENST00000478063 NAIPQ13075 1403 aa19.94■□□□□ 0.78
LMNA-214ENST00000478063 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
LMNA-214ENST00000478063 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
LMNA-214ENST00000478063 RRP7BPQ9NSQ0 103 aa19.94■□□□□ 0.78
LMNA-214ENST00000478063 KDM5CP41229 1560 aa19.94■□□□□ 0.78
LMNA-214ENST00000478063 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
LMNA-214ENST00000478063 ATP7AQ04656 1500 aa19.93■□□□□ 0.78
LMNA-214ENST00000478063 HECW2Q9P2P5 1572 aa19.93■□□□□ 0.78
LMNA-214ENST00000478063 KIDINS220Q9ULH0 1771 aa19.93■□□□□ 0.78
LMNA-214ENST00000478063 NCOA1Q15788 1441 aa19.93■□□□□ 0.78
LMNA-214ENST00000478063 FRMPD1Q5SYB0 1578 aa19.91■□□□□ 0.78
LMNA-214ENST00000478063 KDM6BO15054 1643 aa19.91■□□□□ 0.78
LMNA-214ENST00000478063 AFAP1Q8N556 730 aa19.91■□□□□ 0.78
LMNA-214ENST00000478063 SPAG9O60271 1321 aaKnown RBP19.91■□□□□ 0.78
LMNA-214ENST00000478063 RAB3GAP2Q9H2M9 1393 aa19.91■□□□□ 0.78
LMNA-214ENST00000478063 RTEL1-TNFRSF6BF6WH68 1400 aa19.88■□□□□ 0.77
LMNA-214ENST00000478063 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
LMNA-214ENST00000478063 MYT1LQ9UL68 1186 aa19.86■□□□□ 0.77
LMNA-214ENST00000478063 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
LMNA-214ENST00000478063 ABCA6Q8N139 1617 aa19.85■□□□□ 0.77
LMNA-214ENST00000478063 RAPGEF3O95398 923 aa19.85■□□□□ 0.77
LMNA-214ENST00000478063 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
LMNA-214ENST00000478063 MLH3Q9UHC1 1453 aa19.84■□□□□ 0.77
LMNA-214ENST00000478063 ANKRD50Q9ULJ7 1429 aa19.82■□□□□ 0.76
LMNA-214ENST00000478063 DIP2CQ9Y2E4 1556 aa19.8■□□□□ 0.76
LMNA-214ENST00000478063 COL17A1Q9UMD9 1497 aaPredicted RBP19.79■□□□□ 0.76
LMNA-214ENST00000478063 EIF2AK4Q9P2K8 1649 aaKnown RBP19.78■□□□□ 0.76
LMNA-214ENST00000478063 HRCP23327 699 aa19.78■□□□□ 0.76
LMNA-214ENST00000478063 ERBINQ96RT1 1412 aa19.76■□□□□ 0.75
LMNA-214ENST00000478063 UNC13BO14795 1591 aa19.75■□□□□ 0.75
LMNA-214ENST00000478063 MAGI2Q86UL8 1455 aa19.75■□□□□ 0.75
LMNA-214ENST00000478063 ARHGEF40Q8TER5 1519 aa19.74■□□□□ 0.75
LMNA-214ENST00000478063 A2MP01023 1474 aa19.73■□□□□ 0.75
LMNA-214ENST00000478063 YEATS2Q9ULM3 1422 aa19.73■□□□□ 0.75
LMNA-214ENST00000478063 BCORL1Q5H9F3 1711 aa19.72■□□□□ 0.75
LMNA-214ENST00000478063 CCER1Q8TC90 406 aaPredicted RBP19.72■□□□□ 0.75
LMNA-214ENST00000478063 TRIM52Q96A61 297 aa19.72■□□□□ 0.75
LMNA-214ENST00000478063 DEPDC5O75140 1603 aa19.72■□□□□ 0.75
LMNA-214ENST00000478063 DHX57Q6P158 1386 aaKnown RBP19.71■□□□□ 0.75
LMNA-214ENST00000478063 ACIN1Q9UKV3 1341 aaKnown RBP19.71■□□□□ 0.75
LMNA-214ENST00000478063 DHX29Q7Z478 1369 aaKnown RBP19.7■□□□□ 0.74
LMNA-214ENST00000478063 KDM5DQ9BY66 1539 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms